Scaffold Ga0182824_10014595

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0182824_10014595

Scaffold Ga0182824_10014595

Overview

Basic Information
Taxon OID	3300014966 Open in IMG/M
Scaffold ID	Ga0182824_10014595 Open in IMG/M
Source Dataset Name	Freshwater microbial mat microbial communities from Canadian High Arctic Lake, Ward Hunt Island, Canada - Sample WHa
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Laval University
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1339
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat → Microbial Mat Communities From High Arctic Lakes

Source Dataset Sampling Location
Location Name	Canada: Ward Hunt Island
Coordinates	Lat. (^o)	83.079722	Long. (^o)	-74.138056	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F037916	Metagenome	167	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0182824_100145951	F037916	N/A	GSAVALKRDAQRKPRRDDVETRHKAEIDRLRAVITEITTENLELKKKI*

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