Basic Information | |
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Taxon OID | 3300024978 Open in IMG/M |
Scaffold ID | Ga0209941_1001706 Open in IMG/M |
Source Dataset Name | Wastewater bioreactor microbial communities from Cape Town, South Africa - Thiocy_solids_1 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 14172 |
Total Scaffold Genes | 16 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (6.25%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified → Wastewater Bioreactor → Wastewater Bioreactor Microbial Communities From Cape Town, South Africa |
Source Dataset Sampling Location | ||||||||
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Location Name | South Africa: Cape Town | |||||||
Coordinates | Lat. (o) | -33.936637 | Long. (o) | 18.478905 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F069970 | Metagenome | 123 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209941_100170612 | F069970 | N/A | MTTHLTNAIKVGDRVIFDISWVEKFKAETSSSDKAVKQYQQLVLGGIDQAGVVKELGGNLTTVAYPDGWVLPVPTKYLIVLQSREDILMVI |
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