Basic Information | |
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Taxon OID | 3300031578 Open in IMG/M |
Scaffold ID | Ga0307376_10000010 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Risofladan, Vaasa, Finland - TR-2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 382613 |
Total Scaffold Genes | 415 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 282 (67.95%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thiophilus | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Clay → Unclassified → Soil → Soil Microbial Communities From Risofladan, Vaasa, Finland |
Source Dataset Sampling Location | ||||||||
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Location Name | Finland: Risofladan, Vaasa | |||||||
Coordinates | Lat. (o) | 63.0472 | Long. (o) | 21.7116 | Alt. (m) | Depth (m) | 1 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F025775 | Metagenome | 200 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0307376_1000001098 | F025775 | GGAG | MKQLFTFQGFPMVVVVALIVWSWISIFSVLIAAFF |
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