NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2020350001

2020350001: Viral communities in wastewater treatment process (AD)



Overview

Basic Information
IMG/M Taxon OID2020350001 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0045482 | Gp0051417 | Ga0011175
Sample NameViral communities in wastewater treatment process (AD)
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Illinois, Urbana-Champaign
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size29292896
Sequencing Scaffolds32
Novel Protein Genes38
Associated Families35

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available20
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA1042
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin1451
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin0951
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin2161
All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium ADurb.Bin2761
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin0011

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameWastewater Viral Communities From Wastewater Treatment Facility In Singapore
TypeEngineered
TaxonomyEngineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSingapore: Singapore
CoordinatesLat. (o)1.332Long. (o)103.756Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F024321Metagenome / Metatranscriptome206N
F024777Metagenome / Metatranscriptome204Y
F029768Metagenome / Metatranscriptome187N
F030944Metagenome / Metatranscriptome184Y
F033394Metagenome / Metatranscriptome177N
F039402Metagenome / Metatranscriptome164Y
F041512Metagenome / Metatranscriptome160N
F047561Metagenome149Y
F051061Metagenome / Metatranscriptome144N
F057876Metagenome / Metatranscriptome135Y
F058559Metagenome / Metatranscriptome135Y
F058971Metagenome / Metatranscriptome134N
F059692Metagenome / Metatranscriptome133N
F060834Metagenome132Y
F062245Metagenome / Metatranscriptome131Y
F065806Metagenome / Metatranscriptome127N
F066564Metagenome / Metatranscriptome126Y
F068794Metagenome / Metatranscriptome124N
F071210Metagenome / Metatranscriptome122N
F071725Metagenome122N
F071978Metagenome121Y
F072892Metagenome121N
F076577Metagenome118N
F077343Metagenome / Metatranscriptome117Y
F078767Metagenome / Metatranscriptome116N
F085346Metagenome111Y
F085349Metagenome / Metatranscriptome111Y
F088844Metagenome / Metatranscriptome109N
F091585Metagenome107N
F093490Metagenome / Metatranscriptome106N
F095347Metagenome / Metatranscriptome105Y
F095526Metagenome / Metatranscriptome105N
F096294Metagenome105Y
F102171Metagenome / Metatranscriptome102N
F105255Metagenome / Metatranscriptome100Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
VrWwTxAD_contig00412Not Available762Open in IMG/M
VrWwTxAD_contig00576Not Available658Open in IMG/M
VrWwTxAD_contig01274Not Available723Open in IMG/M
VrWwTxAD_contig03369Not Available1703Open in IMG/M
VrWwTxAD_contig04011Not Available1080Open in IMG/M
VrWwTxAD_contig05967All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104525Open in IMG/M
VrWwTxAD_contig07037Not Available1503Open in IMG/M
VrWwTxAD_contig08596Not Available531Open in IMG/M
VrWwTxAD_contig14468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria929Open in IMG/M
VrWwTxAD_contig17750Not Available664Open in IMG/M
VrWwTxAD_contig17819Not Available536Open in IMG/M
VrWwTxAD_contig17986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria697Open in IMG/M
VrWwTxAD_contig18548Not Available697Open in IMG/M
VrWwTxAD_contig18787Not Available695Open in IMG/M
VrWwTxAD_contig31775Not Available506Open in IMG/M
VrWwTxAD_contig35578All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin145509Open in IMG/M
VrWwTxAD_contig40022All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104530Open in IMG/M
VrWwTxAD_contig48065Not Available633Open in IMG/M
VrWwTxAD_contig52757All Organisms → cellular organisms → Bacteria1171Open in IMG/M
VrWwTxAD_contig53323Not Available770Open in IMG/M
VrWwTxAD_contig53608All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria6571Open in IMG/M
VrWwTxAD_contig53777Not Available1415Open in IMG/M
VrWwTxAD_contig54450Not Available1297Open in IMG/M
VrWwTxAD_contig54526All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin0954358Open in IMG/M
VrWwTxAD_contig58733All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin2161427Open in IMG/M
VrWwTxAD_contig58919Not Available658Open in IMG/M
VrWwTxAD_contig59140All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium ADurb.Bin2765795Open in IMG/M
VrWwTxAD_contig59364Not Available660Open in IMG/M
VrWwTxAD_contig59888Not Available733Open in IMG/M
VrWwTxAD_contig60009All Organisms → cellular organisms → Bacteria15991Open in IMG/M
VrWwTxAD_contig60497Not Available641Open in IMG/M
VrWwTxAD_contig60833All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin0011561Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
VrWwTxAD_contig00412AD_776880F060834TSTKTANSKELFKHSFDLMQLLKQKVITVEEAKAQANLLKQANNILRYELDRAIAEKKFENLDIRQIEDNE
VrWwTxAD_contig00576AD_142180F030944MDKMKNTSTTLELPEGSKATIQGKVIDGKHYLVVEVENEEQELKEGDFAIFWDYNTEDAIIAVYKRYDDDDGLYVDHNDLYWANAIKWDGTKEQFEKVLRG
VrWwTxAD_contig01274AD_517010F068794MAKKEKGLVFNHKTITIRGSFINMLFTMVLMILFIAAAFNDKIAANLKLIAELIIAIYAISYGVWRGAKF
VrWwTxAD_contig01462AD_871710F029768MLDSVLREQEKETVIPALNAIYSEQELNKDSQISVRLERGLYQALEAQTERFGFKNVSQTLRAILTFYFLPVAYELELKNKSVSDFKRFIELKQRDGYSLEQAKANYFLFQAVEYLEFLEQAKVMSNHSLRFMERATEKMNSILQETESKIEQAIKEIEQEQEK
VrWwTxAD_contig03369AD_697270F105255MESNNDRVFTKLVDKHYSPLVIRKYTHWGFPIYVGLITDNDLTDLDHFVVEFMNVNATEGWKNNIQLLRNFAGKFTEELNKFYDRTEGVAVVFYVDKCFISSLYGDFMNHTSCRI
VrWwTxAD_contig04011AD_19190F057876MERMGRTGTRTIRVNKKMIDKIKENKKNHVEEYAKAVIAYKEEALRQLVELTNKVNEGALKIELKLITPVDNSSNYDKIIEMFEWEVDEVVELEQNEFIEYVQDETEFAVNA
VrWwTxAD_contig05967AD_881240F071978MYNKDKIIKTLREIEAESKTIKPYVVVLQPRRDLKEIPAQKLSGYDTVHVDLCGYSRGFAEIGGEKVDVARNYLIEQALESGAKYALFVGEDTVLPYDGFMKLHETAEKNLDAMVVGVYYIKMSI
VrWwTxAD_contig07037AD_68230F088844MRSMTKFDDYFTKKGRNVSRETIGQNSEFIIYRVIGENWKIEIASKFFNDFNKNVDFREAFLLCNVVIVRLREKNLCPYCVEYFENLTQIYQHLKSWHC
VrWwTxAD_contig08596AD_180090F095526MEIKIGSNSLIRDIDYDSKLCLTLGASGITIPLVALPSFEVDIFVENRETEKVHCTFDGATKTNCTITSAGEITCYMPAYTFSVGGKLFIEVITHTPDTNFADGSYDESITIDTK
VrWwTxAD_contig14468AD_883320F058971MTPNLIINLDIEPITLMWNGQAVSIPGTYELVPDEMVKHLHKRVMAIALHERKRIPFCGRLVGQARNGNGKGSVWLIEDDRGQLIKSQKPM
VrWwTxAD_contig17750AD_472390F024321MLEEILMIIAGMAGLGAFVSMLVNLLKAIGLIKDGQGDKAFKIADLIVFVAVTVVYLLKVQVDWAQVNEWLVLLTALFGYVVSVFSGEFTHETIKGTPVIGYSYSENKPKD
VrWwTxAD_contig17819AD_603280F078767MTNQITGITDEILTALQKAGCRTVGILPEVLMFSGNNNPFGFHLLNSETTENDNGGILTQLLDISIFIITQNGINKMKEHCNVLYAAIGEILNSSGLNSKTALVNLETINWHADMPFVTQLVGDLDIISSINLTSNI
VrWwTxAD_contig17986AD_917430F058971MTPNLIINLDIEPITLMWNGQAVSIPGTYELVPDSEVRHLHKRVMAIALHERRRIPFCGKLVGQAKSGKGSVWLVEDDRGQLIKSQKPMVVEGV
VrWwTxAD_contig18548AD_90650F091585MENYFNIVQNTVFVSFVGLFAPFLFPYLFKIVGKWSKRELTKQEKRLLVGLVSFLVSIVIVAIGFNWQGELVERIMAFLMYIVLNFATLRGVVQSIYELVIKNIPSLDEEFDKIEKETKLLF
VrWwTxAD_contig18787AD_542210F039402MSLTDYSNLEKEIENVPEPKVLPRGTEVKARIINVRDGISDKNNAQWYQPVFDVPNEPLAMEFNDFFWDLSDRDKLDEKSGIRAMRKFKMFAEAFGIDYSKPFSWTDDLVGKEGWVILGIRKSEE
VrWwTxAD_contig31775AD_519680F093490RSDKDMKTLLSIALIFIATTVFATPFLVSDPQSGVTSYQLTGWSETNVTAQADGSLRMDVGSAVQGTTYNLTIAACNIWGCSTTVPFAFGKQLPAVPSQLRLVP
VrWwTxAD_contig35578AD_147230F047561MAESNIQPNQIIPDFGTLKNGKLDILVNWDITSDTKTGDMGNEYTSWSYESARINWVLPAVYESEADIQSYLDANYSTGENILGWAQASKITRLTGYKWDLTYPDLIQ
VrWwTxAD_contig40022AD_40390F085349MFKILSIREQLMEEKRKNEALRALNIDLENALLELAEIVAMNEATLQEVTNG
VrWwTxAD_contig48065AD_123470F066564METILNLESKEKLDDCNNIKNLLQKHLTAADSVTVKQVNNVSADNGITYIVKVISDCDSKVLLSQVYSISKVLDQDCIAYSSSDSAIGQGFIGIRPYDKFDDGLFIDYDSLKPLAALK
VrWwTxAD_contig52757AD_485910F095347MYIEAAKAKVEICLEPSKGMELYGYAKKLLSNLIVHLVSNY
VrWwTxAD_contig53323AD_612240F033394MKSIYIYFVDEKADIYYKDNSKNLHCTINLYTTNNEIREQFRKNLLEKYWDKVEISDINVLKKHSFKDSFIRIFTQYRENFINND
VrWwTxAD_contig53608AD_204940F058971MTPNLIINLDIEPITLMWNGQAISLPGTYELVPDEMVKHLHRRVMAIALHERKRIPFCGRLVGQAKSGKGSVWLIEDDRGQLIKSQKPMVIEGGKEG
VrWwTxAD_contig53777AD_524320F041512VEKDYRLIRDLNSYVKLRAKKDTAITLKLKAKIAKMSGEELDIAEVYYHQLLKSDIRTLGEIGCIELAIALAQWLYPRILREAYAERSKDYMLAP
VrWwTxAD_contig54450AD_850850F065806VGCSNIVAYGYAHDESTWSNAGKIYDWAGNGQKLVSIQESESSGAARNRVYFYGGYTQDNTADARSGKCLQFNPKNATYWIEQSFFVPATASTARTVAIYLKDDSSFNGSVWLELWFNGVRIAGPTEKTMTTSYVQESITGAADGYPG
VrWwTxAD_contig54526AD_48440F062245MSAYLETTIQRWNGADGDQMAITDAPEGSTFHAVDVGKKYIFHDGGWTEDLRDIYAIQAAAI
VrWwTxAD_contig57991AD_928730F102171IESNSDLKRFGVEWIKLDHNLCRAFATNEFAMIVADIEPNQWHDIFDGLPELVFITKLKRDEVHYFEGKELVYYNYRTVFEAVGKEPNYQPVMHLDLELLRNLTDKFNDVYFVKQSGLVLFMKLEGDKYPAGSYYGR
VrWwTxAD_contig58733AD_441090F077343PDHPYATLAEAIAASDAAIALAANRWWARRNRIYACGDDLGEDLVKFPTKCDVIGCGSQNSNTQLGLSGHHAPVGESFGTRFFNVHFKAKAHASPVITLTNETGGLQVHGCTFDGTLGTMTSGILATASPFLVVDDCDFVGTFATSYITFGAGEAGRTRILNNRMLGVAAKGIVAPAQTKAAWIPLIQGNTIIATGKPVEDAASVFAVVNNRLITDIDIGTTTDGYSFDLSMACGNILTGLNGVAATVPFAVIAEG
VrWwTxAD_contig58919AD_792540F058559KTLNEARNYACGDHGRDVLLTYGDYDETILSYHPMSERLERIQSVSEAKEKLLREYEKKRFIK
VrWwTxAD_contig59140AD_265230F076577VNLWPESKVLALMELAFHFGAINYELNNGKKRREMWKEFKENAIDKRLKYVNPDPRCTHPVNLDVIDYCWGYARKIDKGEEIGMEELCEGCEFFKKEANNENPTQSN
VrWwTxAD_contig59140AD_265240F071725MKTLLNQTESEYLNLGSLDQELSWVLKIYSSGKINDLIYDGLLLFATDEEIKAIREKWERKEINEVGLFHELEKLSKVESLPG
VrWwTxAD_contig59140AD_265330F059692MDKETEQLILKKLQLDYLSLHAVLTDLEKIISALVVDLDPRVNEIQRIQDQMKECLRGS
VrWwTxAD_contig59140AD_265350F072892MNINLLKTISTRLFGLYSQFKSIVSDLETNNTLDNREWAEGLLNHLSAELYYEANCLTDVLFPPKIEEKDEVMFKIDGIIDAGRNPMSEDEFCELFLKWAEENKLQFGGGLGVYREEEEGEPLAGE
VrWwTxAD_contig59140AD_265360F096294SSSAEPLETKHYRLITQEQYEAELKEAYFSGWEDRNDNELTEIFHKRSRTKEEYFKWFMEELRKA
VrWwTxAD_contig59364AD_689510F058559GRYFTTLKSARNYATGDHGRDVLLTYGDYDETILSYHPMSERLERIQTVNQAKEKLLREYEKKQFIK
VrWwTxAD_contig59888AD_734710F085346MNQITQMFMESNARMKKIMKGGFRLDEIASAQREFEGQIKLINAVVSAFGIASKNKRALDGLNKMNLMDDSTAIDLLLGDPEVDKVKCPEHDDLITRAECLDYSGSHSDECLG
VrWwTxAD_contig60009AD_17120F051061MGLLDKLEERAKNRERKSLYIEEIDETVYWYPMTAGERQRIMNAAGFKWARDAVQMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINKIADELLTKIVNAIDPPRTEEQQIEEAKN
VrWwTxAD_contig60497AD_940200F024777MKGVKMDAELIFAEDVEVCPKCGSSEFWENRIIWTGDDPTDEELASIECKVCGAVFYARDYYRRRFGKLEDDDERNTILEKELEVGFWLG
VrWwTxAD_contig60833AD_630970F071210MGLGELNMKEKRWLGTQKYELHCFYCGGFHITGNCPQIVKEMNGWKYDRSCPETGHIKIVPNGDEYPTVLAFNGYHYRVVGLWGVPGKLLWLELQRFYGDTIVAATFCPDELMEMDLGMSDDEQLSAWLGGLPFLSVSPPEFNGSEA
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