Metagenome / Metatranscriptome Family F085349

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085349
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	52 residues
Representative Sequence	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Number of Associated Samples	69
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.38 %
% of genes near scaffold ends (potentially truncated)	19.82 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.964 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (38.739 % of family members)
Environment Ontology (ENVO)	Unclassified (88.288 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.847 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.25% β-sheet: 0.00% Coil/Unstructured: 43.75%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00078	RVT_1	19.82
PF01471	PG_binding_1	4.50
PF06605	Prophage_tail	2.70
PF09992	NAGPA	2.70
PF00589	Phage_integrase	2.70
PF05105	Phage_holin_4_1	1.80
PF13495	Phage_int_SAM_4	0.90
PF07833	Cu_amine_oxidN1	0.90
PF13392	HNH_3	0.90
PF06854	Phage_Gp15	0.90
PF13472	Lipase_GDSL_2	0.90
PF05036	SPOR	0.90
PF01510	Amidase_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4824	Phage-related holin (Lysis protein)	Mobilome: prophages, transposons [X]	1.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.86 %
Unclassified	root	N/A	30.63 %
Viruses	superkingdom	All Organisms → Viruses	4.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.96 %
Unclassified	root	N/A	30.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	23.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	16.22 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.90 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	12.61 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.90 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	2.70 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.80 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.90 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.90 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Desulfotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum	1.80 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	0.90 %
Phosphitispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Phosphitispora	0.90 %
Mesobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Mesobacillus	0.90 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.90 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Mesobacillus subterraneus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Mesobacillus → Mesobacillus subterraneus	0.90 %
Phosphitispora fastidiosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Phosphitispora → Phosphitispora fastidiosa	0.90 %
unclassified Methanosarcina	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina	0.90 %
unclassified Desulfotomaculum	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → unclassified Desulfotomaculum	0.90 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.90 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.90 %
Desulfotomaculum reducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → Desulfotomaculum reducens	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.50 %
Methanosarcina sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	0.90 %
Desulfotomaculum sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → unclassified Desulfotomaculum → Desulfotomaculum sp.	0.90 %
Mesobacillus subterraneus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Mesobacillus → Mesobacillus subterraneus	0.90 %
Phosphitispora fastidiosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Phosphitispora → Phosphitispora fastidiosa	0.90 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.90 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.90 %
Desulfotomaculum reducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → Desulfotomaculum reducens	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2020350001\|VrWwTxAD_contig40022	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	530	Open in IMG/M
2209111015\|2218371378	Not Available	520	Open in IMG/M
3300000558\|Draft_11707174	Not Available	550	Open in IMG/M
3300001580\|Draft_10461643	Not Available	514	Open in IMG/M
3300001788\|BP130528DKS3_1706048	Not Available	787	Open in IMG/M
3300002163\|JGI24707J26582_10124944	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300002166\|JGI24713J26584_10011081	All Organisms → cellular organisms → Bacteria	3983	Open in IMG/M
3300002166\|JGI24713J26584_10041286	All Organisms → Viruses → Predicted Viral	1205	Open in IMG/M
3300002167\|JGI24714J26587_10014601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3336	Open in IMG/M
3300002167\|JGI24714J26587_10023249	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	2229	Open in IMG/M
3300002168\|JGI24712J26585_10034677	All Organisms → Viruses → Predicted Viral	2399	Open in IMG/M
3300002168\|JGI24712J26585_10056922	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300002168\|JGI24712J26585_10164188	Not Available	649	Open in IMG/M
3300002170\|JGI24711J26586_10011897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	4207	Open in IMG/M
3300002170\|JGI24711J26586_10069232	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300002173\|JGI24709J26583_10094379	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300002173\|JGI24709J26583_10095245	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300002378\|JGI24502J29692_10067419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3382	Open in IMG/M
3300002378\|JGI24502J29692_10072532	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300002391\|JGI24501J29690_1063821	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002391\|JGI24501J29690_1121933	Not Available	626	Open in IMG/M
3300002392\|JGI24503J29689_10086242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2409	Open in IMG/M
3300002392\|JGI24503J29689_10188826	Not Available	545	Open in IMG/M
3300002703\|draft_10902863	Not Available	634	Open in IMG/M
3300002898\|draft_10097849	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300002898\|draft_10238868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	991	Open in IMG/M
3300002898\|draft_10244765	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300002898\|draft_10258283	Not Available	928	Open in IMG/M
3300002898\|draft_10302247	Not Available	813	Open in IMG/M
3300002898\|draft_10538558	Not Available	504	Open in IMG/M
3300002898\|draft_10541098	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006805\|Ga0075464_10014168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4000	Open in IMG/M
3300006805\|Ga0075464_10194376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1204	Open in IMG/M
3300006805\|Ga0075464_10826213	Not Available	577	Open in IMG/M
3300006805\|Ga0075464_11059451	Not Available	510	Open in IMG/M
3300009647\|Ga0123326_1185059	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009655\|Ga0116190_1005893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	8127	Open in IMG/M
3300009655\|Ga0116190_1077761	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1314	Open in IMG/M
3300009655\|Ga0116190_1097402	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300009657\|Ga0116179_1119347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	954	Open in IMG/M
3300009658\|Ga0116188_1079280	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1364	Open in IMG/M
3300009664\|Ga0116146_1117948	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300009666\|Ga0116182_1124461	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300009667\|Ga0116147_1062434	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1715	Open in IMG/M
3300009667\|Ga0116147_1189217	Not Available	812	Open in IMG/M
3300009670\|Ga0116183_1059787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2217	Open in IMG/M
3300009670\|Ga0116183_1060630	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300009670\|Ga0116183_1116284	All Organisms → Viruses → Predicted Viral	1377	Open in IMG/M
3300009671\|Ga0123334_1129470	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1234	Open in IMG/M
3300009674\|Ga0116173_1354997	Not Available	642	Open in IMG/M
3300009676\|Ga0116187_1039832	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	2644	Open in IMG/M
3300009680\|Ga0123335_1113473	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300009680\|Ga0123335_1382326	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	654	Open in IMG/M
3300009681\|Ga0116174_10265643	Not Available	837	Open in IMG/M
3300009682\|Ga0116172_10063711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Phosphitispora → Phosphitispora fastidiosa	2203	Open in IMG/M
3300009682\|Ga0116172_10414190	Not Available	632	Open in IMG/M
3300009689\|Ga0116186_1145326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → Desulfotomaculum reducens	1111	Open in IMG/M
3300009696\|Ga0116177_10654780	Not Available	545	Open in IMG/M
3300009704\|Ga0116145_1154565	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	914	Open in IMG/M
3300009711\|Ga0116166_1073899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1426	Open in IMG/M
3300009712\|Ga0116165_1128203	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	912	Open in IMG/M
3300009714\|Ga0116189_1133968	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300009715\|Ga0116160_1044093	Not Available	2211	Open in IMG/M
3300009780\|Ga0116156_10354798	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010265\|Ga0134098_1004454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	7040	Open in IMG/M
3300010268\|Ga0134097_1054745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	715	Open in IMG/M
3300010338\|Ga0116245_10178614	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1174	Open in IMG/M
3300010340\|Ga0116250_10576214	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010344\|Ga0116243_10575678	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	677	Open in IMG/M
3300010347\|Ga0116238_10702305	Not Available	623	Open in IMG/M
3300010351\|Ga0116248_11003330	Not Available	566	Open in IMG/M
3300010351\|Ga0116248_11083582	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010357\|Ga0116249_10296483	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1494	Open in IMG/M
3300012949\|Ga0153798_10236482	Not Available	626	Open in IMG/M
3300014203\|Ga0172378_10052535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3500	Open in IMG/M
3300014203\|Ga0172378_10205240	Not Available	1561	Open in IMG/M
3300014203\|Ga0172378_11171538	Not Available	544	Open in IMG/M
3300014204\|Ga0172381_10536194	Not Available	901	Open in IMG/M
3300014204\|Ga0172381_10577582	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300014204\|Ga0172381_11078223	Not Available	590	Open in IMG/M
3300014205\|Ga0172380_11323059	Not Available	503	Open in IMG/M
3300014206\|Ga0172377_10081447	All Organisms → Viruses → Predicted Viral	2984	Open in IMG/M
3300014206\|Ga0172377_10169804	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300014206\|Ga0172377_10599989	Not Available	885	Open in IMG/M
3300015214\|Ga0172382_10006208	All Organisms → cellular organisms → Bacteria	17466	Open in IMG/M
3300019203\|Ga0179955_1075092	Not Available	586	Open in IMG/M
3300019222\|Ga0179957_1102626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1235	Open in IMG/M
3300019227\|Ga0179956_1081031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	838	Open in IMG/M
3300019227\|Ga0179956_1197679	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1435	Open in IMG/M
3300025613\|Ga0208461_1017799	All Organisms → cellular organisms → Bacteria	3193	Open in IMG/M
3300025638\|Ga0208198_1032907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2044	Open in IMG/M
3300025686\|Ga0209506_1087460	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300025713\|Ga0208195_1011160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5393	Open in IMG/M
3300025737\|Ga0208694_1119269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	963	Open in IMG/M
3300025762\|Ga0208040_1018496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3930	Open in IMG/M
3300025762\|Ga0208040_1228334	Not Available	633	Open in IMG/M
3300026311\|Ga0209723_1030491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfotomaculum → unclassified Desulfotomaculum → Desulfotomaculum sp.	3035	Open in IMG/M
3300026311\|Ga0209723_1032104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2904	Open in IMG/M
3300026311\|Ga0209723_1281057	Not Available	563	Open in IMG/M
3300027510\|Ga0209537_1012857	All Organisms → cellular organisms → Bacteria	4741	Open in IMG/M
3300027510\|Ga0209537_1056780	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1036293	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1204893	Not Available	792	Open in IMG/M
(restricted) 3300028576\|Ga0255340_1272120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	656	Open in IMG/M
(restricted) 3300028593\|Ga0255347_1394765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Mesobacillus → Mesobacillus subterraneus	539	Open in IMG/M
3300028602\|Ga0265294_10048344	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	3830	Open in IMG/M
3300028602\|Ga0265294_10130439	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300028602\|Ga0265294_10150888	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300028602\|Ga0265294_10253939	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300028602\|Ga0265294_10404212	Not Available	863	Open in IMG/M
3300028602\|Ga0265294_10852508	Not Available	500	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	88.29%
Environmental	Environmental	11.71%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	43.24%
Biotransformation	Engineered → Biotransformation	18.02%
Aquatic	Environmental → Aquatic	11.71%
Bioreactor	Engineered → Bioreactor	9.01%
Solid Waste	Engineered → Solid Waste	8.11%
Unclassified	Engineered → Unclassified	6.31%
Built Environment	Engineered → Built Environment	3.60%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	38.74%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	18.02%
Freshwater	Environmental → Aquatic → Freshwater	8.11%
Landfill	Engineered → Solid Waste → Landfill	7.21%
Unclassified	Engineered → Unclassified → Unclassified	6.31%
Anaerobic	Engineered → Bioreactor → Anaerobic	6.31%
Marine	Environmental → Aquatic → Marine	3.60%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	3.60%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	3.60%
Unclassified	Engineered → Bioreactor → Unclassified	2.70%
Grass	Engineered → Solid Waste → Grass	0.90%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	38.74%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	18.02%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	8.11%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	7.21%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	6.31%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	6.31%
Coastal	Environmental → Aquatic → Marine → Coastal	3.60%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	3.60%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	3.60%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	2.70%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%
Dissolved Organics (Anaerobic)	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic)	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	38.74%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	18.02%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	8.11%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	7.21%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	6.31%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.60%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	3.60%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	3.60%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	2.70%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.90%
Unclassified	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	38.74%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	18.02%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	8.11%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	7.21%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	6.31%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	6.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.60%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	3.60%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	3.60%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	2.70%
Biogas Reactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Biogas Reactor	0.90%
Wastewater	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2020350001	Viral communities in wastewater treatment process (AD)	Engineered	Open in IMG/M
2209111015	Tailings pond microbial communities from Northern Alberta -TP6_2008_2010:	Engineered	Open in IMG/M
3300000558	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300001580	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6	Engineered	Open in IMG/M
3300001788	BioPara_130528DK_S3	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002391	Biogas fermentation microbial communities from Germany - Plant 2 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002703	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009664	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009667	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG	Engineered	Open in IMG/M
3300009696	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG	Engineered	Open in IMG/M
3300009704	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG1_MetaG	Engineered	Open in IMG/M
3300009711	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010265	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 9_31_10_142_A3 metaG	Engineered	Open in IMG/M
3300010268	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 8_30_10_142_A2 metaG	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300012949	Switchgrass enrichment cultures co-assembly	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019203	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019222	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR4_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019227	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025686	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025737	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025762	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028576 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant10	Engineered	Open in IMG/M
3300028593 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant24	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
AD_40390	2020350001	Wastewater	MFKILSIREQLMEEKRKNEALRALNIDLENALLELAEIVAMNEATLQEVTNG
2218323991	2209111015	Hydrocarbon Resource Environments	MVSDMFKYMDLREQLQEEKHKNKALQSLVKNLEDATLELAEIVAANEEALREVQNG
Draft_117071742	3300000558	Hydrocarbon Resource Environments	MVSDMFKYMDLREQLQEEKHKNKALQSLVKNLEDATLELAEIVAANEEALREVQNG*
Draft_104616433	3300001580	Hydrocarbon Resource Environments	CFTITYGRMVSDMFKYMDLREQLQEEKHKNKALQSLVKNLEDATLELAEIVAANEEALREVQNG*
BP130528DKS3_17060482	3300001788	Biogas Reactor	MSMFKFLSTAEQLLEERRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
JGI24707J26582_101249444	3300002163	Biogas Fermentantion	MFRFLGIREQLLEEKRKNEALQSLVNDLEDALVEIAEIAAENTEVEDDG*
JGI24713J26584_100110813	3300002166	Biogas Fermentantion	MRIYGKVVISVFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
JGI24713J26584_100412863	3300002166	Biogas Fermentantion	MFRFLGIREQLLEEXRKNEVLQSLVNDLEDALVEIAEIAAENTEVEDDG*
JGI24714J26587_100146012	3300002167	Biogas Fermentantion	MFRFLGIREQLLEEKRKNEVLQSLVNDLEDALVEIAEIAAENTEVEDDG*
JGI24714J26587_100232492	3300002167	Biogas Fermentantion	VFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
JGI24712J26585_100346772	3300002168	Biogas Fermentantion	MFKFLDLKERLLIEQQKNAALQAQNIDLEDALLELAEIVAQNETAIQEVQNG*
JGI24712J26585_100569222	3300002168	Biogas Fermentantion	MFRFLGIREQLLEERRKNEVLQSLVNDLEDALVEIAEIAAENTEVEDDG*
JGI24712J26585_101641882	3300002168	Biogas Fermentantion	MKTYGRKVSSMFKYLSMREQLLEEKRKNEALQSLVKDLEDAVIELAEIVAANEETLQEVQNG*
JGI24711J26586_100118977	3300002170	Biogas Fermentantion	MFKFLDLREQLLEEKRKNEALQSLVNDLEDALVEIAEIAAENTEVEDDG*
JGI24711J26586_100692323	3300002170	Biogas Fermentantion	MSMFKFLSTAEQLLEERRKNEAXRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
JGI24709J26583_100943791	3300002173	Biogas Fermentantion	MFRFLGIREQLLEEKRKNEALQSLVNDLENALVEIAEIAAENTEVEDDG*
JGI24709J26583_100952451	3300002173	Biogas Fermentantion	MFKFLDLREQLLEERRKNEALQSLVNDLEDALVEIAEIAAENTEVDDDG*
JGI24502J29692_100674193	3300002378	Biogas Fermentantion	MFKFLDLRDRLLLEQQKNAELQARNTDLENALLELAEIVVQNETAIQEVQNG*
JGI24502J29692_100725322	3300002378	Biogas Fermentantion	MFKFLDLREQLLEERRKNEALQSLVNDLEDALVEIAEIVAENTEEVEDDG*
JGI24501J29690_10638211	3300002391	Biogas Fermentantion	FIKIYGRKAVTMFKFLDLREQLLEERRKNEALQSLVNDLEDALVEIAEIAAENTEVDDDG
JGI24501J29690_11219331	3300002391	Biogas Fermentantion	LDLKERLLIEQQKNAALQARNTDLEDALLELAEIVVQNETAIQEVQNG*
JGI24503J29689_100862422	3300002392	Biogas Fermentantion	MFKFLDLREQLLEEKRKNEALQSLVNDLEDALVEIAEIAAENTEVDDDG*
JGI24503J29689_101888262	3300002392	Biogas Fermentantion	MNMFKFLDLKERLLIEQQKNAALQAQNIDLEDALLELAEIVAQNETAIQEVQNG*
draft_109028632	3300002703	Hydrocarbon Resource Environments	MFKYMDLREQLQEEKHKNKALQSLVKNLEDATLELAEIVAANEEALREVQNG*
draft_100978492	3300002898	Biogas Fermenter	MFKFMNLREQLLEERRKNESLRSQVKEIEDATVELAEIVATNEEAINNG*
draft_102388683	3300002898	Biogas Fermenter	VFKYLSTKEQLLEERRKNEMLRSLVRDLEDATLELAEIVASNEAAIQQTQQEVQNG*
draft_102447652	3300002898	Biogas Fermenter	MFKYLGIREQLAEEKRKNEALRSLAKDLEDALIEVAEIVAENAEVVNNG*
draft_102582832	3300002898	Biogas Fermenter	MFKFLSTKDQLLEEKRKNEALQAQIKEQEDALIELAEIIAANEEVIDNG*
draft_103022472	3300002898	Biogas Fermenter	MKIYGRMVNDMFKRLGTREQLQAEKIKNEALQALCKDLEDAVIELAEIAAANEEAIKEASING*
draft_105385582	3300002898	Biogas Fermenter	MVSDMFKYMDLREQLQAEKRKNEALQSLVKDLEDAVIELAEIVAANEEKLQEVQNG*
draft_105410982	3300002898	Biogas Fermenter	MFKFLGLREQLAEERRKNEALQELVKDLENATIELAEIVATNEEAINNG*
Ga0075464_100141683	3300006805	Aqueous	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANDEVIQEVQNG*
Ga0075464_101943762	3300006805	Aqueous	MFSYKSIKEQLQEERRKNEALRALCKDLEDAAIELAEIVAANEEAIKAIKEE*
Ga0075464_108262132	3300006805	Aqueous	MFKFMSLREQLLEEKRKNEALQAQVKEQEDALIELAEIVAANEEAITNG*
Ga0075464_110594513	3300006805	Aqueous	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
Ga0123326_11850592	3300009647	Anaerobic Biogas Reactor	MFKFLSTKEQLLEEKRKNEAFRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
Ga0116190_10058937	3300009655	Anaerobic Digestor Sludge	MFRFLDLREQLLEERRKNEELRALCKDLEDAAIELAEIVAANEEAIQEVQSNG*
Ga0116190_10777612	3300009655	Anaerobic Digestor Sludge	MFRFLGIREQLLEEKRKNEELRALCKDLEDAAIELAEIVAANEEAIQEVQSNG*
Ga0116190_10974022	3300009655	Anaerobic Digestor Sludge	MFKFMSTKEQLLEEKRKNEALQSLVKDLEDAVIELAEIVAANEEKLQEVQ*
Ga0116179_11193472	3300009657	Anaerobic Digestor Sludge	MFKFLDIREQLLEERRKNEELRALCKDLEDAVIELAEIVAANEEAIQEVQSNG*
Ga0116188_10792802	3300009658	Anaerobic Digestor Sludge	MFRFLGIREQLLEEKRKNEELRALCKDLEDAAIELAEIVAANEEAIREVEYDG*
Ga0116146_11179481	3300009664	Anaerobic Digestor Sludge	MFKFLDIKEQLLEEKRKNEALRAIVKEQEDALIELAEIVASNEEAIANG*
Ga0116182_11244613	3300009666	Anaerobic Digestor Sludge	MFKFFDLREQLLEERRKNKELRALCKDLEDAAIELAEIVAANEEAIQEVQING*
Ga0116147_10624342	3300009667	Anaerobic Digestor Sludge	MFKFLSIREQLMEEKRKNEALIALNIDLENALLELAEIVAINEATLQEVTNG*
Ga0116147_11892171	3300009667	Anaerobic Digestor Sludge	MFKFMSTKEQLLEEKRKNEALQSLVKDLEDAVIELAEIVAANEETLQEVQNG*
Ga0116183_10597872	3300009670	Anaerobic Digestor Sludge	MFKFLSTKDQLLEEKRKNEALQAQIKEQEEALIELAEIIAANEEAIANG*
Ga0116183_10606306	3300009670	Anaerobic Digestor Sludge	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAAN
Ga0116183_11162842	3300009670	Anaerobic Digestor Sludge	MFKYLGLREQLMEEKRKNEALQSLAKDLEDALIEVAEIVAENAEVVNNG*
Ga0123334_11294702	3300009671	Anaerobic Biogas Reactor	MFKFLSIREQLLEEKRKNEALTALNIDLENALLELAEIVAMNEVIIQEVV*
Ga0116173_13549972	3300009674	Anaerobic Digestor Sludge	MKIYGKVVNRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANDEVIQEVQNG*
Ga0116187_10398325	3300009676	Anaerobic Digestor Sludge	MFKYLSDKEQLLEEKRKNEVLQSLVKDLEDAVIELAEIVAAN
Ga0123335_11134732	3300009680	Anaerobic Biogas Reactor	MGGRISMFKFLSIREQLLEERRRNEALKALNIDLENALLELAEIVAMNEVIIQEVTNG*
Ga0123335_13823262	3300009680	Anaerobic Biogas Reactor	MFKFLSIREQLLEEKRKNEALTALNIDLENALLELAEIVAMNEVIIQEVT
Ga0116174_102656432	3300009681	Anaerobic Digestor Sludge	MFKFLSTAEQLLEERRKNEALRSLVKDLEDAAIELAEIVAANEEAIQEVQNG*
Ga0116172_100637115	3300009682	Anaerobic Digestor Sludge	KFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANDEVIQEVQNG*
Ga0116172_104141901	3300009682	Anaerobic Digestor Sludge	IGFMKIYGKVVNRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAAIELAEIVAANEEAIQEVQNG*
Ga0116186_11453264	3300009689	Anaerobic Digestor Sludge	MFKFLSTAEQLLEERRKNEALRSLVKDLENAAIELAEIVAANEEAIQEVQNG*
Ga0116177_106547801	3300009696	Anaerobic Digestor Sludge	MFKYLGIREQLAEEKRKNEALQSITKDLEDALIEVAEIVAENAEVVNNG*
Ga0116145_11545653	3300009704	Anaerobic Digestor Sludge	MFRFLRIREQLLEEKRKNEALQSLVNDLEDALIEIAEIAAENTEVDDDG*
Ga0116166_10738992	3300009711	Anaerobic Digestor Sludge	MFKFLNLREQLHEERRKNEELRALCKDLEDAIIELAEIVAANEEAIQEVQSNG*
Ga0116165_11282033	3300009712	Anaerobic Digestor Sludge	MFKFLNLREQLREERRKNEELRALCKDLEDAVIELAEIVAANEE
Ga0116189_11339682	3300009714	Anaerobic Digestor Sludge	MFKFMSTKEQLLEEKRKNEALQSLVKDLEDAVIEL
Ga0116160_10440936	3300009715	Anaerobic Digestor Sludge	MFKYLSNKEQLLEEKRKNEALQALLKEQEDALIELAEIVASKEAIANG*
Ga0116156_103547982	3300009780	Anaerobic Digestor Sludge	MGGRISMFKFLSVREQLMEEKRKNEALQAVNIDLENALLELAEIVAMNEVAPQEVTNG*
Ga0134098_10044547	3300010265	Switchgrass Degrading	MFKFLDIREQLREERRKNEELRALCKDLEDAAIELAEIVAANEKAIREVQDDG*
Ga0134097_10547451	3300010268	Switchgrass Degrading	IREQLREERRKNEELRALCKDLEDAAIELAEIVAANEKAIREVQDDG*
Ga0116245_101786142	3300010338	Anaerobic Digestor Sludge	MFKFLNLREQLREERRKNEELRALCKDLEDAVIELAEIVAANEEAIQEVQSNG*
Ga0116250_105762142	3300010340	Anaerobic Digestor Sludge	MFKFLDLREQLLEERRKNEALQSLVNDLEDALVEIAEIAAENTEVDDNG*
Ga0116243_105756781	3300010344	Anaerobic Digestor Sludge	MFKYLSDKEQLLEEKRKNEVLQSLVKDLEDAVIELAEIVAANEETLQEVQNG*
Ga0116238_107023053	3300010347	Anaerobic Digestor Sludge	MKIYGKVAPRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
Ga0116248_110033303	3300010351	Anaerobic Digestor Sludge	QLLEERRKNEALRSLVKDLEDAAIELAEIVAANEEAIQEVQNG*
Ga0116248_110835822	3300010351	Anaerobic Digestor Sludge	MFKFLDLREQLLEERRKNKELRALCKDLEDAAIELAEIVAANEEAMREVEDDG*
Ga0116249_102964832	3300010357	Anaerobic Digestor Sludge	MKIYGKVVNRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG*
Ga0153798_102364822	3300012949	Switchgrass Degrading	MFKYLSDKEQLLEEKRKNEVLQSLVKDLEDALIELAAIVAANEEALREVQNG*
Ga0172378_100525354	3300014203	Groundwater	MEGEIKMFKFMNTREQLQEERRKNEALQARCIDLENATLELAEIVAMNEQTIEEVVNNG*
Ga0172378_102052404	3300014203	Groundwater	MVQTMFKFLDVREQLRAERQKNEALQSQNKDLENAVLELAEIVSVNEDLIQEVLNE*
Ga0172378_111715381	3300014203	Groundwater	MEGVTSMFKFLDQREQLLEEKRKNEALQVQNKDLENALLELAEIVATNEATLMEVQNG*
Ga0172381_105361944	3300014204	Landfill Leachate	MFKFMSLREQLMEEKRKNEALRAIVKDLEDAAIELAEIVAANEEAITNG*
Ga0172381_105775824	3300014204	Landfill Leachate	QLQAEKIKNEALQALCKDLEDAVIELAEIAAATEEAIKEASING*
Ga0172381_110782232	3300014204	Landfill Leachate	MFKYLGIREQLAEEKRKNEALQSITKDLEDALVEVAEIVAENAEVVNNG*
Ga0172380_113230591	3300014205	Landfill Leachate	MFKYLGIREQLAEEKRKNEALQSLAKDLEDALIEVAEIVAENAEVVNNG*
Ga0172377_100814473	3300014206	Landfill Leachate	MEGVTSMFKFLDQREQLLEEKRKNEALQAQNKDLENALLELAEIVATNEAVLQEVQNG*
Ga0172377_101698043	3300014206	Landfill Leachate	MFKFLSTKEQLLEEKRKNEALRSLVKDFEDAALELAEIVATNEEAIQEVQNG*
Ga0172377_105999893	3300014206	Landfill Leachate	MFKFLSIREQLMEEKRKNEALKALNIDLENALLELAEIVAMNEEAIDG*
Ga0172382_100062082	3300015214	Landfill Leachate	MFKLLKLREQLQEERRKNEALQSLVKDLEDAAIELAEIVAANEEALQNG*
Ga0179955_10750922	3300019203	Anaerobic Digestor Sludge	MFKFLDLREQLLEEKRKNEELRALCKDLEDAAIELAEIVAANEEAIQEVQSNG
Ga0179957_11026263	3300019222	Anaerobic Digestor Sludge	VNRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0179956_10810312	3300019227	Anaerobic Digestor Sludge	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0179956_11976793	3300019227	Anaerobic Digestor Sludge	MFRFLDLREQLLEERRKNEELRALCKDLEDAAIELAEIVAANEEAIQEVQSNG
Ga0208461_10177994	3300025613	Anaerobic Digestor Sludge	MFKFMSTKEQLLEEKRKNEALQSLVKDLEDAVIELAEIVAANEEKLQEVQ
Ga0208198_10329073	3300025638	Anaerobic Digestor Sludge	MFRFLDLREQLLEERRKNEELRALCKDLEDAAIELAEIVAA
Ga0209506_10874601	3300025686	Anaerobic Digestor Sludge	MFKFLDIKEQLLEEKRKNEALRAIVKEQEDALIELAEIVASNEEAIANG
Ga0208195_10111602	3300025713	Anaerobic Digestor Sludge	MFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANDEVIQEVQNG
Ga0208694_11192693	3300025737	Anaerobic Digestor Sludge	MFKYLGLREQLMEEKRKNEALQSLAKDLEDALIEVAEIVAENAEVVNNG
Ga0208040_101849611	3300025762	Anaerobic Digestor Sludge	MSVVKSKHGRKVSSMFKYLSDKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0208040_12283341	3300025762	Anaerobic Digestor Sludge	IGFMKIYGKVVNRMFKFLSTKEQLLEEKRKNEALRSLVKDLEDAAIELAEIVAANEEAIQEVQNG
Ga0209723_10304911	3300026311	Anaerobic Biogas Reactor	ELKMFKFLSTKDQLLEEKRKNEALQAQIKEQEDALIELAEIIAANEEVIDNG
Ga0209723_10321044	3300026311	Anaerobic Biogas Reactor	MFKFLSTKDQLLEEKRKNEALQAQIKEQEDALIELAEIIAANEEAIVNG
Ga0209723_12810573	3300026311	Anaerobic Biogas Reactor	MFKFLSTKEQLLEEKRKNEAFRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0209537_10128575	3300027510	Biogas Fermentantion	VFKFLSTKEQLLEEKRKNEALRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0209537_10567803	3300027510	Biogas Fermentantion	MFRFLGIREQLLEERRKNEVLQSLVNDLEDALVEIAEIAAENTEVEDDG
(restricted) Ga0255343_10362932	3300028561	Wastewater	MFKFMSTKEQLLEEKRKNEALRSLVKDLEDAVLELAEIVAANEEAIQEVQNG
(restricted) Ga0255341_12048931	3300028570	Wastewater	LSIREQLMEEKRKNEALRALNIDLENALLELAEIVAMNEVIIQEVTNG
(restricted) Ga0255340_12721201	3300028576	Wastewater	MFKFLSIREQLMEEKRKNEALRALNIDLENALLELAEIVAMNEVIIQE
(restricted) Ga0255347_13947652	3300028593	Wastewater	MFKFLSIREQLMEEKRKNEALRALNIDLENALLELAEIVAMNEVIIQEVTNG
Ga0265294_100483443	3300028602	Groundwater	MEGVTSMFKFLDQREQLLEEKRKNEALQAQNKDLENALLELAEIVATNEAVLQEVQNG
Ga0265294_101304393	3300028602	Groundwater	MFKFLPTREQLLEEKRKNEALRSLVKDLEDAVIEIAGIVAANEEAVNNG
Ga0265294_101508882	3300028602	Groundwater	MFKFLSTKEQILEEKRKNEVLRSLVKDLEDAALELAEIVAANEEAIQEVQNG
Ga0265294_102539393	3300028602	Groundwater	MFKFLSIREQLLEERRRNEALKALNIDLENALLELAEIVAMNEVIIQEVTNG
Ga0265294_104042123	3300028602	Groundwater	MFSYKGIKEQLQDERRKNEALQAQVKEQEDAIIELAAIVAANEEAINDG
Ga0265294_108525081	3300028602	Groundwater	DMFKRLGTREQLQAEKIKNEALQALCKDLEDAVIELAEIAAANEEAIKEASING

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters