NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2149837002

2149837002: Marine microbial communities from the Baltic Sea



Overview

Basic Information
IMG/M Taxon OID2149837002 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0046796 | Gp0052107 | Ga0010722
Sample NameMarine microbial communities from the Baltic Sea
Sequencing StatusPermanent Draft
Sequencing CenterRoyal Institute of Technology
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size37658923
Sequencing Scaffolds38
Novel Protein Genes48
Associated Families48

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available21
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium1
All Organisms → Viruses1
All Organisms → cellular organisms → Eukaryota1
All Organisms → Viruses → Predicted Viral2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2031
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMarine Microbial Communities From The Baltic Sea
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationBaltic Sea
CoordinatesLat. (o)59.888937Long. (o)24.847412Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000055Metagenome / Metatranscriptome3096Y
F003299Metagenome / Metatranscriptome495N
F003327Metagenome / Metatranscriptome494Y
F008926Metagenome / Metatranscriptome326Y
F010726Metagenome / Metatranscriptome300Y
F011815Metagenome / Metatranscriptome287Y
F014573Metagenome / Metatranscriptome262N
F015420Metagenome / Metatranscriptome255Y
F019928Metagenome / Metatranscriptome227Y
F019929Metagenome / Metatranscriptome227Y
F023494Metagenome / Metatranscriptome210Y
F026746Metagenome / Metatranscriptome197Y
F026750Metagenome / Metatranscriptome197Y
F029603Metagenome / Metatranscriptome188N
F032098Metagenome / Metatranscriptome181Y
F032099Metagenome / Metatranscriptome181Y
F034772Metagenome / Metatranscriptome174Y
F035568Metagenome / Metatranscriptome172N
F039407Metagenome / Metatranscriptome164Y
F040945Metagenome / Metatranscriptome161N
F042096Metagenome / Metatranscriptome159N
F044824Metagenome / Metatranscriptome154N
F047392Metagenome / Metatranscriptome150Y
F052290Metagenome / Metatranscriptome143N
F052965Metagenome / Metatranscriptome142Y
F054452Metagenome / Metatranscriptome140N
F057779Metagenome / Metatranscriptome136N
F061389Metagenome / Metatranscriptome132Y
F063208Metagenome130Y
F066285Metagenome / Metatranscriptome127N
F066286Metagenome / Metatranscriptome127N
F067260Metagenome126N
F067261Metagenome / Metatranscriptome126Y
F068283Metagenome125Y
F069496Metagenome / Metatranscriptome124Y
F079390Metagenome / Metatranscriptome116N
F080674Metagenome / Metatranscriptome115Y
F081938Metagenome / Metatranscriptome114Y
F087963Metagenome110Y
F089593Metagenome109N
F091070Metagenome / Metatranscriptome108N
F091071Metagenome108Y
F092953Metagenome / Metatranscriptome107N
F094597Metagenome106N
F094598Metagenome106Y
F098315Metagenome / Metatranscriptome104N
F104105Metagenome / Metatranscriptome101Y
F106194Metagenome / Metatranscriptome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Baltic_Sea__contig00653Not Available528Open in IMG/M
Baltic_Sea__contig01734All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage764Open in IMG/M
Baltic_Sea__contig01920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium794Open in IMG/M
Baltic_Sea__contig02807Not Available2790Open in IMG/M
Baltic_Sea__contig03616Not Available698Open in IMG/M
Baltic_Sea__contig05359All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium590Open in IMG/M
Baltic_Sea__contig09558Not Available840Open in IMG/M
Baltic_Sea__contig15734Not Available767Open in IMG/M
Baltic_Sea__contig16617All Organisms → Viruses738Open in IMG/M
Baltic_Sea__contig18620All Organisms → cellular organisms → Eukaryota585Open in IMG/M
Baltic_Sea__contig18786Not Available633Open in IMG/M
Baltic_Sea__contig19128Not Available896Open in IMG/M
Baltic_Sea__contig21472Not Available597Open in IMG/M
Baltic_Sea__contig22067All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage580Open in IMG/M
Baltic_Sea__contig29160All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage532Open in IMG/M
Baltic_Sea__contig31832All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1677Open in IMG/M
Baltic_Sea__contig31853All Organisms → Viruses → Predicted Viral1240Open in IMG/M
Baltic_Sea__contig32204Not Available688Open in IMG/M
Baltic_Sea__contig32207All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage604Open in IMG/M
Baltic_Sea__contig32209Not Available834Open in IMG/M
Baltic_Sea__contig32210All Organisms → Viruses → Predicted Viral1219Open in IMG/M
Baltic_Sea__contig32220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3031Open in IMG/M
Baltic_Sea__contig34331Not Available3385Open in IMG/M
Baltic_Sea__contig34606Not Available569Open in IMG/M
Baltic_Sea__contig36228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6741Open in IMG/M
Baltic_Sea__contig37930Not Available950Open in IMG/M
Baltic_Sea__contig38330Not Available791Open in IMG/M
Baltic_Sea__contig38523Not Available774Open in IMG/M
Baltic_Sea__contig38731All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1965Open in IMG/M
Baltic_Sea__contig40129Not Available962Open in IMG/M
Baltic_Sea__contig41139All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium779Open in IMG/M
Baltic_Sea__contig47535Not Available577Open in IMG/M
Baltic_Sea__contig49124Not Available543Open in IMG/M
Baltic_Sea__contig50270Not Available569Open in IMG/M
Baltic_Sea__contig51845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203501Open in IMG/M
Baltic_Sea__contig54134Not Available751Open in IMG/M
Baltic_Sea__contig63277Not Available550Open in IMG/M
Baltic_Sea__contig64995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces4676Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Baltic_Sea__contig00653Baltic_Sea_00477290F091071TPPTDELVRWADPFNPSIEHRLFRFLHAGERGRNVFKLTNSSYTEDQPGDMTTVAVTYHGGHSHTVSATEAAALTAAGYGIYIT
Baltic_Sea__contig01734Baltic_Sea_00541700F032099MAFEKGHKFSKGRPPKVEEEKVNNIFIKALSELYNKETEDETKIAFVKDTLMQSQRGQLFIAEHIFGKPKDVIEATHNVNDFNIKDIFKIGNKTE
Baltic_Sea__contig01920Baltic_Sea_00702280F032098MENSDYPYHTLDYTTPWAEFLAYAEICHQLNVPNQPSVGRFMRYRNYLKEIGVL
Baltic_Sea__contig02807Baltic_Sea_00601330F026750MKLKRGFGRKDKIVIEHVDLDQLNLIVNGEKLTEARAAVMGAELAKKAHQILRLRQQK
Baltic_Sea__contig02807Baltic_Sea_00601340F044824MKYRFAKSIGNYGISDESAAYLIENNQSFAVGLSREGNKKIAWVGFDQYGIRFECIAIVFIDALYIIHLKPIEAKEDIDEVKKRLW
Baltic_Sea__contig03616Baltic_Sea_00426900F079390MDKPKNFKELKQRLLPFINYEQGIQLNEESKVQNVGSMINSHVKILEANPGNAGYMPYYDRLVILLTILEAGWE
Baltic_Sea__contig05359Baltic_Sea_00200610F011815DLDQISKDLSFGVSYSQQKRNDHARALCNKVGDAILGYADGITAQVEAKTNESMTEMNAHNISAMIFYDVQLQEFMNGLGMAANDALILAVNRLKSLQKLYLFEQKGGENYLG
Baltic_Sea__contig05450Baltic_Sea_00279540F000055MKFAALILCTAAVQAVQGPPPPTAADTPSSGYYGADEDDVMNNIFNHYAVPVTNAAGQATGQHVLYRDGAQKACAEILLVTKQVSEAKMEAYMAEFFPRTWAKFDMNNTGEIDITESHTFFRSSRKTQPIRPCSRIPHRY
Baltic_Sea__contig09558Baltic_Sea_00344660F091070RATPVKSGEMARVVAIDGIVCRSSLKKVERVIIANVDPKKPRQLKKTSEFAMSDSEQTRRMLAISAYNNASDILDRSELSEEDAYRALCEALASRALWEPIGNAMNLLIGDWQVARALTVNGMAEDAVTLIESAIARAIENAVDDWLIASLHEGYSRALLNADDERYGDVYMVTVQLIAGISDLEDRSIIESQFADLPMP
Baltic_Sea__contig15734Baltic_Sea_00463180F026746VALSLLAQGNNGDEILTILDTLVADIEQEGINSCAEVFEV
Baltic_Sea__contig16617Baltic_Sea_00355810F014573MTYLFKMYIQDEQLRTEIKKILAFKRRNSIVKEIQDNGNKFHFFQLTNFLEGKDVSLSTLKKIDNYIKSAV
Baltic_Sea__contig18620Baltic_Sea_00346350F066286MHRCTLLHARKLISIAIYANNRNITFMPAITSTSSRMHGEFLRLLFLQAHRETTAHFTAIGMPAQQHCDSFRFRRAAFYNGLKSKVGLAAAKTAAMRINLNIDGCGVVAPPVHSSLRAPHLLANLLAHNLPLPRAAH
Baltic_Sea__contig18786Baltic_Sea_00491900F054452MTDELKMSLLKELMFGLDVWNHEHHEEIMFLHDFGLVKVYDEDLQFTATTEDGVLELERLIKLYFVFLN
Baltic_Sea__contig19128Baltic_Sea_00258390F066285MDKKSWNVVYFNRPDVHKNLVWSDGKRYFDGFLGLDNSVYRKTSGTPVAEPNAVYWTEKPFNASDDQE
Baltic_Sea__contig19128Baltic_Sea_00258400F061389MKACAIFVSMNAILQKSFLWMTPGTVFRLKTHEDREDIEIFICEDPDEEGKEFWLSRGFVLGEFESDYKPLCWTEDLFLIV
Baltic_Sea__contig21099Baltic_Sea_00736010F094598MTAKQMRSLLESISADPQLKQSKDSILLAEDQYPEHLDAIFNKLTTPTTLQNTM
Baltic_Sea__contig21182Baltic_Sea_00191260F106194GTMYMGPAHAENCDADLVIVVNDDTKYPANLSTKLVELYKEDQSCWCLSGFRVAEYVRNNGRVGRYNKERIDVTESYGGVILDMKWLRAMKDTFLDFYKLTYNDDIIISNLLSKMNIARKSICDVSMNIGMIKQYSYGMGEDALFQNNGEGSHFENNKRVFKLLAEKNLSYF
Baltic_Sea__contig21472Baltic_Sea_00188080F057779MRSIIAVFTFICFNSFSQNEDTIQKKRINLFSVDASYSYLNYDLFHGISYTHHFPLFSTSIGLQTAVKTLYSTQKFFPETSCSFVYRLVDKHTFQFGPSLQYNMRKQKVKVWHHFNEILLGYSLFYGKRIQFSHSAGFGPFWETFKTDNNQVYSI
Baltic_Sea__contig22067Baltic_Sea_00692240F008926VCYADKHLEKEYQNYKWKKIGDQITDEPVKLFDDAMDAVRYATTYIKEQYYTDDAISRSK
Baltic_Sea__contig29160Baltic_Sea_00161900F019929MTSYQALINEITDFYNNHVQVKKVGSDFQEQMPNFATKDEKYPIVFIVPVSALATENTNDFILDIFCFDIIQKDRQTLT
Baltic_Sea__contig31832Baltic_Sea_00396540F035568MPIVMDDDTDLWDKIREDMQYQNNMAVIDIYRRGITDKIKLIVFQTYFDKGYSTARAMAEYFKIPVTSAHYWIQEIKTDLKQLRDEN
Baltic_Sea__contig31853Baltic_Sea_00409930F052290MAYNIKYPMRRKMATVLRRVLRANFLVDTGTLVDSVRINAEISDRFNLRIQIVAAYYFGFLNNGTQTIGAYNLLRQFDVALDDAGIYAEIWGDYTEYLLTKYPILEIDNILERSGDILFSFEPLFGEFYGELDY
Baltic_Sea__contig32204Baltic_Sea_00673310F015420MKKLIKYFTPVGAEEKAFAIAMLIVSTVTLSILFLFTFLELIL
Baltic_Sea__contig32207Baltic_Sea_00675440F003299MYKVVYKTFDYWGGPVKLVTRIIEAYDPQHVQQLIQKNDDLIMLIEEI
Baltic_Sea__contig32207Baltic_Sea_00675450F003327AIADGNYTHQKYLRFRTWYFKSHKGSMRNAARDFKMFDLMYGLDINIKREDNEDV
Baltic_Sea__contig32209Baltic_Sea_00677670F067261FLIDRFILNDIMLTFFSVPFMLTKVTALVLASIEVLSINENYKVVKGIDLWQSMKLLFSRAKEIKEDLNKIKK
Baltic_Sea__contig32210Baltic_Sea_00678590F019928MKHSGILSIIVFSLGYLTGISLLFEPALYLKLMGASIIGYLSFILVLQQERREDEEGEEY
Baltic_Sea__contig32220Baltic_Sea_00687030F039407MTDLRDEGTGYLAPPRQIRRSEDRRNEELSKELAPVINMSQG
Baltic_Sea__contig34331Baltic_Sea_00564260F063208MDDEKEKDLEQTNNLSLEEKIAHSFIIPARNPQRVFTMPKGKISEGKQLSEILIEERRSAKF
Baltic_Sea__contig34606Baltic_Sea_00764160F068283VTSRKRDENLDQGVIDSFGHEWATFDYGETETTEALNAQFKAYCAPINLNQFNPQKFSSS
Baltic_Sea__contig35227Baltic_Sea_00367660F092953VKKVKVTWHVAKNEDQPVSRFQIPLVPGLSSTIHVAQGTEMFPIIKLDETITPTHVFVAMTRSRRSSRCLIEPSDNFDFGVFGKGTPLNPKNELLLAHLRGDEDFEEQLVEYHSRANAKKPKADPKSISSSRTLAGQ
Baltic_Sea__contig36228Baltic_Sea_00270400F080674VATLVVGIADKLQGVQELSSTCYDESECVLATFFALVLA
Baltic_Sea__contig37809Baltic_Sea_00634350F089593MTELVYKQEGGFGNLLIQLSSMQKECTQLHDHVFDYELGNCVSISGFTRVSHEGTQPECPIYINQQTIRLVHPRIRNIIKPTPFMEDMISKHKHLIEGTCCGISIRRGSYKEDSKQFKTEQAEDASHYFCSDEGLEKFEDVIKQAPGPVFVSSDSTSTMKMLIEKFGDKIRHYESPYVIGMPQDVREISIDEYHNIYLKFFLLSMCPRLFLTGGRGDMIGFSTYAYMAAIYGNKPFQIVF
Baltic_Sea__contig37930Baltic_Sea_00718380F052965FRDWWEESYKRPPNAQAVMTHVAFAAYMFSLMELLEVADD
Baltic_Sea__contig38330Baltic_Sea_00167400F087963MESQSGWHPNEDMKMSYAPSFRAPGGHIFDVVAQILKKHVFTAIFAQHVASELRMRLWTSRSQTDRNTPSEWKIDLGKSGYNGFFCYNGYNGFLPFFNVFDRFITDF
Baltic_Sea__contig38523Baltic_Sea_00315900F094597DPWVPPNDEDDTIENIVLEDRGLDAIPADGSEERTKFDNVVVQYKRTMAYLREILNHTFLRAVYQTSSRQARLEFQEVQRNFINDHSNDDPNDEPEKFTALNIIEYIEDDCLSSNDKALQSIMNTITKMVRHNNQTLLDWLQSFVPLVNKFLKATQQQVLDADESKAIWKAHFANQITLAEKQTMLVFQPQHLRDAEIQQLIQPK
Baltic_Sea__contig38731Baltic_Sea_00481870F081938MNLKFIEGGKARHKVIEFGGVGVANEEVVDSKGEGGGVSVVAEEHRGGGFRVAVLG
Baltic_Sea__contig40129Baltic_Sea_00704850F098315VGLKVKGIDVRTYAIAGVEVAMVELPVLNDTEFFPELTSVTGLSNPYRQQHTLFALDLDPIEVKGGGLAPAIEKIYRGPSEFYAGYIKGMADAGVPTAENFKDYSVDIVSSVDAHRCDVMADNGIDMIGKFCGMIELIA
Baltic_Sea__contig41139Baltic_Sea_00653750F047392SGQPSNQIGLVHDHDPVKYAGYVLYFVEGKLVGHDRLTQTWSIVPREEAEFEHAFKIETHAIHSDAEEGKPSFVGRNNFKRDHEDSVRYELFHQDEDRGLVLDAIQVDGKPQEIDHETEHYIFPGSLEIGTKWLSEPVTSSLPGTCELEVIGSEIYNGTNCWVISSTRQPKKNPLMKNSETMRKTARFLFDPLTLSVMRIDSVTEGVGPLGREFKFVYHMEAAE
Baltic_Sea__contig47535Baltic_Sea_00527460F010726MKLVFALIVMIDGTVDAEATSYWHDITRCRWFAEELTIQGTIRRYHTPVHAYCKPVYVNPAEVVIYD
Baltic_Sea__contig49124Baltic_Sea_00062420F067260MSHFEKIVDPDLKRCETPEQMLQVLMYHYELDCKLGTITSLAFRQGLKAAVNMINPKAKTSSSALSH
Baltic_Sea__contig50270Baltic_Sea_00110400F034772MKNLIDYFTPTTEEHKSFLRHFLGTLTMFIVLGGIFYCLMYLKRVVRWKIEI
Baltic_Sea__contig51641Baltic_Sea_00312010F104105LEYIPNSTYSYYEVKTTLENVKRLKVKPSRYWNELPIKDVQSDILYSLSDYCPGLPYEANIIRDNESLGLPIYRIRELVFYQDQAPPVENNVPDEDRSRKRVDAETTISNLVALGAIPDQEQLTFQDYLIRVEETLSKYEMYLQEWPFLVAQRLLKMQVSRLRFIKSALIEKLNNHPLSTANTAVFGSDENQGNPPAGYDSMAYFGSAPVNADNSSQSGGMMGNNSQSANRSGQT
Baltic_Sea__contig51845Baltic_Sea_00472830F042096MAGSDIFANSTTTQGSNVAIFSGPIRLKAFIITPSANAGTVTFVDDATTKFVISTGASADSGPINISLPDEGVRFGTNLKVNISANGASAVTCFFA
Baltic_Sea__contig54134Baltic_Sea_00537520F040945LKEHQSSEPAVRRQYFEVQDIDQISYRSLRHTTRIGDRYIPIVARIIPGTALPLLMGRDFRDDHAESPAQQKQVNELNHPRVYFFKREKTSKPRLTLKQLERIHRDGNHPDFTEMTQECTRLGHKVDKAVELRVSRVIQECQLCLNKNRLFSHGLGQKYNTSFNTDIMVRRERVIQDDYYTHLFTVECMDAGFTVPKYINQYRYEDKYEMI
Baltic_Sea__contig63277Baltic_Sea_00138330F069496MESYNKRKRKLEEKYGKLIVVKPINNEGIKNNINENYIRKIADITDEEGLKLAYKQKDGLHQHYNKLFIAGTKDFPQDHIDDLKLPFDDTLKKTKRGRDAESYYLSHHEIDTVIGHSLGGAVALSLEKQYKKKVIILMV
Baltic_Sea__contig64995Baltic_Sea_00120120F023494MKGNAALNRAFISFPQLNRLVTTTNFIDKKSHLREQILIRSFKSNQLSKVKTKELG
Baltic_Sea__contig64995Baltic_Sea_00120140F029603VVYTSTLGLISGEKSLKTFLPVDRGGKYAFIQIKASGYPQNLPKGPKCPKRYPQFSKSVGQQIPLPPALVAPNRSYAITSRPDQSQQLKLRAVFKGVREEDEAYFPAE
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