Sample 3300001199

Overview

Basic Information
IMG/M Taxon OID	3300001199 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0087377 \| Gp0055698 \| Ga0012574
Sample Name	Lotic microbial communities from nuclear landfill site in Hanford, Washington, USA - IFRC combined assembly
Sequencing Status	Permanent Draft
Sequencing Center	Pacific Northwest National Laboratory
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	633875668
Sequencing Scaffolds	66
Novel Protein Genes	67
Associated Families	66

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	18
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima	1
Not Available	9
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	2
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1
All Organisms → cellular organisms → Bacteria → Nitrospirae	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Lotic Microbial Communities From Nuclear Landfill Site In Hanford, Washington, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic → Lotic Microbial Communities From Nuclear Landfill Site In Hanford, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → aquifer → groundwater
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Hanford, Washington, USA
Coordinates	Lat. (^o)	46.371184	Long. (^o)	-119.275414	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000842	Metagenome / Metatranscriptome	865	Y
F001089	Metagenome / Metatranscriptome	781	Y
F001341	Metagenome / Metatranscriptome	719	Y
F001675	Metagenome / Metatranscriptome	654	Y
F001926	Metagenome / Metatranscriptome	616	Y
F002493	Metagenome / Metatranscriptome	554	Y
F003495	Metagenome / Metatranscriptome	483	Y
F003850	Metagenome / Metatranscriptome	465	Y
F004323	Metagenome / Metatranscriptome	443	Y
F004511	Metagenome / Metatranscriptome	435	Y
F005060	Metagenome / Metatranscriptome	413	Y
F006361	Metagenome / Metatranscriptome	375	Y
F009862	Metagenome / Metatranscriptome	312	Y
F010209	Metagenome / Metatranscriptome	307	Y
F010640	Metagenome	301	Y
F011156	Metagenome	294	Y
F011244	Metagenome	293	Y
F013351	Metagenome / Metatranscriptome	272	Y
F013455	Metagenome	271	Y
F014751	Metagenome	260	Y
F015199	Metagenome	256	Y
F015834	Metagenome	251	Y
F019507	Metagenome / Metatranscriptome	229	Y
F020725	Metagenome / Metatranscriptome	222	Y
F022012	Metagenome	216	Y
F024036	Metagenome / Metatranscriptome	207	Y
F024750	Metagenome / Metatranscriptome	204	Y
F027309	Metagenome	195	Y
F030134	Metagenome / Metatranscriptome	186	Y
F034611	Metagenome / Metatranscriptome	174	Y
F040117	Metagenome / Metatranscriptome	162	Y
F041513	Metagenome / Metatranscriptome	160	Y
F042086	Metagenome / Metatranscriptome	159	Y
F043514	Metagenome / Metatranscriptome	156	Y
F044934	Metagenome / Metatranscriptome	153	Y
F046895	Metagenome	150	Y
F046963	Metagenome	150	N
F047545	Metagenome / Metatranscriptome	149	Y
F051412	Metagenome / Metatranscriptome	144	Y
F051807	Metagenome / Metatranscriptome	143	Y
F053355	Metagenome / Metatranscriptome	141	Y
F053823	Metagenome / Metatranscriptome	140	Y
F055500	Metagenome	138	Y
F056385	Metagenome / Metatranscriptome	137	N
F060108	Metagenome / Metatranscriptome	133	Y
F060948	Metagenome / Metatranscriptome	132	Y
F061316	Metagenome	132	Y
F062803	Metagenome / Metatranscriptome	130	Y
F064234	Metagenome / Metatranscriptome	129	Y
F067222	Metagenome	126	N
F067563	Metagenome / Metatranscriptome	125	Y
F075679	Metagenome	118	Y
F078624	Metagenome / Metatranscriptome	116	N
F080131	Metagenome / Metatranscriptome	115	Y
F082354	Metagenome	113	Y
F082441	Metagenome	113	Y
F082766	Metagenome / Metatranscriptome	113	Y
F083954	Metagenome	112	Y
F084433	Metagenome	112	Y
F085764	Metagenome	111	Y
F085767	Metagenome / Metatranscriptome	111	Y
F087621	Metagenome / Metatranscriptome	110	Y
F090835	Metagenome	108	Y
F100778	Metagenome / Metatranscriptome	102	N
F104090	Metagenome / Metatranscriptome	101	Y
F105129	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
J055_10001054	All Organisms → cellular organisms → Bacteria	25921	Open in IMG/M
J055_10001646	All Organisms → cellular organisms → Bacteria	18896	Open in IMG/M
J055_10002703	All Organisms → cellular organisms → Bacteria	13457	Open in IMG/M
J055_10006087	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima	7561	Open in IMG/M
J055_10006145	All Organisms → cellular organisms → Bacteria	7503	Open in IMG/M
J055_10006372	All Organisms → cellular organisms → Bacteria	7316	Open in IMG/M
J055_10012891	All Organisms → cellular organisms → Bacteria	4516	Open in IMG/M
J055_10014970	All Organisms → cellular organisms → Bacteria	4082	Open in IMG/M
J055_10015859	All Organisms → cellular organisms → Bacteria	3930	Open in IMG/M
J055_10016497	All Organisms → cellular organisms → Bacteria	3825	Open in IMG/M
J055_10018198	Not Available	3566	Open in IMG/M
J055_10023012	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
J055_10024448	All Organisms → cellular organisms → Eukaryota → Sar	2921	Open in IMG/M
J055_10033754	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
J055_10037496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2187	Open in IMG/M
J055_10039963	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
J055_10040452	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2079	Open in IMG/M
J055_10059464	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1609	Open in IMG/M
J055_10062167	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1561	Open in IMG/M
J055_10068649	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1464	Open in IMG/M
J055_10069449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1453	Open in IMG/M
J055_10076459	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1365	Open in IMG/M
J055_10080028	All Organisms → cellular organisms → Bacteria → Proteobacteria	1325	Open in IMG/M
J055_10087274	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
J055_10087774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1246	Open in IMG/M
J055_10093277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
J055_10095168	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
J055_10099522	Not Available	1146	Open in IMG/M
J055_10101077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1133	Open in IMG/M
J055_10104246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1110	Open in IMG/M
J055_10104426	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	1109	Open in IMG/M
J055_10105599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1100	Open in IMG/M
J055_10109472	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
J055_10126403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
J055_10126773	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	975	Open in IMG/M
J055_10128107	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	968	Open in IMG/M
J055_10130377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	957	Open in IMG/M
J055_10133110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	944	Open in IMG/M
J055_10137635	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	924	Open in IMG/M
J055_10153960	Not Available	858	Open in IMG/M
J055_10157975	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	844	Open in IMG/M
J055_10159194	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
J055_10172845	Not Available	796	Open in IMG/M
J055_10184170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	764	Open in IMG/M
J055_10187323	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	756	Open in IMG/M
J055_10188226	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	753	Open in IMG/M
J055_10188813	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
J055_10209677	All Organisms → cellular organisms → Bacteria → Nitrospirae	702	Open in IMG/M
J055_10220029	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
J055_10222146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	677	Open in IMG/M
J055_10237477	Not Available	649	Open in IMG/M
J055_10243038	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	640	Open in IMG/M
J055_10262404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	609	Open in IMG/M
J055_10266858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	603	Open in IMG/M
J055_10270130	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
J055_10274440	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15	592	Open in IMG/M
J055_10276916	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
J055_10279993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	585	Open in IMG/M
J055_10284112	Not Available	579	Open in IMG/M
J055_10290782	Not Available	571	Open in IMG/M
J055_10292883	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
J055_10308032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
J055_10321327	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	536	Open in IMG/M
J055_10323303	Not Available	534	Open in IMG/M
J055_10337180	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
J055_10348293	Not Available	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
J055_10001054	J055_1000105411	F046895	MTPFEQAQENVKNKKLVTPNVNTDQYQSVGANSIDYFGYQLATHKFNLSIMAKGMKFRGIKFSDLKHYYGLKGRSAKDCLEQFEKIMADYKEKFENAKTEE*
J055_10001646	J055_100016463	F013455	MSLEVETFAAPWPGVLVEMKDFVDLWFLARRRTPATVRIFISRTLVPQEKLQPHVRAFKASLAGIPGCAIEFKGTEAPSHKIEIEYRRSP*
J055_10002703	J055_1000270310	F022012	MKKLLILACALVFATSAFAAQGKQITAKYSGVVEKYDAATKTLTVKRKDNKQGDFVVAETSEVLDNKTKADASALTVGRKIDVEFVMDGAKKIVVKAKVSGAATTK*
J055_10006087	J055_100060873	F030134	MQTKYFKDKIQPVLQRFKLRSCNLSTVEQTDLLSYILVDKIIQHRGSNHVYR
J055_10006145	J055_100061456	F014751	MVAVLLAMILSMPGAFVFDGRQADAQGAKNPLAGSWSADLSRSRLDPKIPFKEISITIGVTGNAVTVASSLVMPNGAHIQERETFRADGTETAATQYTGVAHVATWIGPQVFALITKKGGEIVALITYQVSSDGQTLTARTSGPIDQTIVFRRRPS*
J055_10006372	J055_100063726	F090835	MSDQEVLRKALNEIEGYRYRWGWSFGITAALSQAAWMLLIFGSPAASDKQTILMAALAVAMTVFGGVFLLVLLIYRMTHKILQAIEVGARRHP*
J055_10012891	J055_100128915	F060108	MELLGRLCAAFGISLILTLALLALYQDDGGQAQPEPATITQASAAPANGTP*
J055_10014970	J055_100149702	F047545	MAKTPEQVDELLKLVRDQDIATLRALERQLHSLLEQKERGEAIQRHGETDRDVLSKRCPNVPIDPDLLALVGIHPENPVQDDKSLIREIIARRLTD*
J055_10015859	J055_100158596	F010209	MTLRKQIVAFLMTLTLIPVLALAQEKNGTVSSYDKESRMVVIKGKDWEQKAKVSSAAAKDQADVLKEGAKVKVEFDDRGGGDVRVKSISPR*
J055_10016497	J055_1001649710	F000842	MLDLSGVAGGGTLGQSNAEQERPYLAALSGQDRAYKAGGLKSRGAGRESEGSQVPRKACRKTRWREGALL*
J055_10018198	J055_100181985	F082354	MITNRVYRLKEAAEVGKGMPLPVRQEIEIVTDVVYINGNMVPPEMQSLFYNWIMNNPSLFDDVTKNW*
J055_10023012	J055_100230123	F082441	MKKATFLSSAFFLLAIWLYQGTTQAGEVTIGPENKIPPYYKPGSGRCSAGRGYSASAEAPNFPSTYPKMGLRVFNGEVIGFQFEVDAKDGWRPWYDQPEGKPTTHEGGIPHYTQTIYIKKGPTAEECKSSKGPYGQ*
J055_10024448	J055_100244483	F001926	VRQEDIPDTNNPKIRHPVLEGDKLIKEVLNGGYNVHPVPPPNSDINERIRRRYERKRIKMEKLLTLGNATSGEPWKITTK*
J055_10033754	J055_100337542	F043514	MWGERSRHAEVARTNPKARGQTPESLKLLEPSILEEIKKSGFVEKVK*
J055_10037496	J055_100374963	F064234	MKTDPGRPRSLREIEMEVEAEGREWTRQRLQQRLQEEADRHVEVFPPQRPQGGPSAHAPDADAHRLGRG*
J055_10039963	J055_100399631	F087621	MNGRKREGTVEILRGRRRLRRRKRTYKAQAEVVRDAAWEVGRGHSVAMKAWTAKPARAKGLDSSRAFEEGRTV*
J055_10040452	J055_100404523	F034611	MQHKTILSLTIDLLANNAFSHLKDEEISAMHHLILKLQEPLSRIQEKLLLSFWNHACTANLPPHLLHCCNTMLQHYGRSPLEMQEVEMEIY*
J055_10059464	J055_100594641	F024036	SELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMALFFVLLTFLPIIYNYNVYNKHVPTIPMQNSLLQTFAFIIFMMSLYCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYMAFVHHLDLIDHYIFQFFQTFIRKCLKLYKKNINIMKNTISKFVNFSNINKNYYNLVFDNKNYNINLKINKR
J055_10062167	J055_100621673	F075679	VNVYLTQSRFTYSTHVELLDDVLFPQKVHWFPETYHKVTTGMFYPPHKVAEKVLDPDLMADLRENSAGKTAFILAAGNTNFSGISPHNKKPSRLSYAYKFLPLTLTQVYAARVAQPPSEKAA*
J055_10068649	J055_100686491	F060948	MFAFLILQVVVFLGLVLCCTHLSEITLTIAANIFHTFFAFKGKFYWWIFTDKQLNTDTIIRLAYAHYVAAFFLASLRWM*
J055_10069449	J055_100694492	F001089	VTSAESDYLFRLAALSLSFVGFSSIVVALRGALGGELSDRHIRLVRLYIEGGLLVTALALAPTLLSLLHVPDTVIWPVSSAAAASIFTFVLLIQFRRRRTVEPGQFPPWVVVIYAISIVAVAGLWFNVAGIPFRPGAGPYAVVLTWALCIFGFIFVRTIEIFLHRPPQT*
J055_10076459	J055_100764595	F044934	TPFSSNTRFTGVGSQDVLIISVVFAGISTTVSFTNLLITRRTLAMPGLRNRRVLLPFVTITTLLALRLLVPITPVLGAAMIMMALDRH*
J055_10080028	J055_100800283	F001341	MADRVPDGLNPSIESRQITFEADVSSVTPFLKLATVHRNGVGHMTFACDEGPSLGGLGSAPTPLMYFSAALAF*
J055_10087274	J055_100872743	F100778	SAGRTMGFTVRSRAGVFELMSRPRVVRAEDIHTVAASLIAMLRRETAGIVVG*
J055_10087774	J055_100877742	F051412	MYHEICMAILPPHSLAETLRDWDEIAEQLAEPNRKRPRYVYY*
J055_10093277	J055_100932772	F004511	VSDSERGATSAAELFDLLWESLADVLGTAATAIILRRAIHQAALRTACAERVIVARNGLEYEYRVPEAWKQPGSDEAVDALRVVAAALRVLLVELTGPVVVDRLGRLPAFRKWGIEFSHGATND*
J055_10095168	J055_100951682	F055500	MNNDIKETIEQLANSLQAVTLLSTRLRRQLGESAQEAVELEAAADKAVRAIKRLKPDETNP*
J055_10099522	J055_100995223	F011156	MATTTTITVDSNLMARLAELARQADLEVDEFVGALLRRVADADVRFERGVPTFPRRPGAPMLSVDDVDRLANGSDV*
J055_10101077	J055_101010771	F020725	MNTLRQLEQEVLAEGREWTRQRLEKRLQAESDQMPTLCPKTGEPLKEVRWRELQLSAVGGTVKLRVRHGYSPALDQWVCPARELWGLKAYQRLSPELESRLAYTASETASYEAAAKMAATWGSPVSDGCIHQHAQSLGQAAAELQLPTP
J055_10104246	J055_101042462	F104090	MSTNLRVRATLLRELGKIAAKSDLDVSELAEDALRQFVRSHRATAHLTSSKANVRRLRAAHAEIETEIARRRRKAA*
J055_10104426	J055_101044262	F024750	MKLTHSELEFLSAWAREEWEPACYQLPAHRLQLAHGVVGASLIVLIKSWASNERKKDQEILNVADNPNPTWPWSTADDFRIRLAEATERIIHSEIPVA*
J055_10104426	J055_101044263	F067563	MVSNPDQNSPEFRAVLSQTPGGAITGPYCQGAVEYEMGGRTLTVSTKTPLRYSRVKMELRAKDYGDQKNPPDAAMTPEQWIAEEKLMPGALHGYRYIEDRLP*
J055_10105599	J055_101055992	F002493	MDHTETPRAATTPTTVDDAPRIRTIRARLPGQMLRERIEMAQVCYGPLHTLAEIRQKVGHTLPRKAGFVRGAVLEPIEDYRHAIPDEALLKYDDAVKSGLFSKFWVATPTYYQERQIDPWILAEVTGTDRYAVVAQWDV*
J055_10109472	J055_101094721	F010640	MSRKAITTFCAIPTALYLVLIGILHGVVNVSGFQGAIERGEIPARLGDSVLVNAAFSGAALSMLGLLVVLVLPALRAGSRCALRVATAIGILVAVVGAAGYVWAPTKPRVLIFLFFGALLAAPLMIWRREFSST*
J055_10126403	J055_101264032	F062803	MLGRRALPDGRIAGLDATPDFHHGLLGRQSRDSGDGGADRVVAERVLRLGGAVILEGQRAPILDLHDLPDADFRLHTLDLVGVSMGAWGLKDELSRLPAVPHLKELYINGRLWYNQPVTLVADTIGLFAWATDLEKLVLSKPVQTYIPLEDSVLQRIDVLSGVQEMRLHQTRLPGDSLAPFTNLRYLDLSHNRFFD
J055_10126773	J055_101267733	F082766	MAAQIQANFEKLFQIAVPIYCPVEDNKGTLYIVSTNGEVYEVNEGTPKPSFTTGGQPTSLVFDSEGSAFIADMGY*
J055_10128107	J055_101281073	F061316	MVLDLMAQLDREFTERNKIETLLRELLDAKRNRKSEQLSADQLA
J055_10130377	J055_101303772	F019507	MDARQLVDVACDEDPRAPCLWLPSDLFPDFCAAIRQRPNVVGAVIYRNKTVRDGGPYCDVTTRAP*
J055_10133110	J055_101331101	F004323	MPRVGFRRLEGRAEPASANHSPVTRDYPSRALSDVFQAAALRLFYQGTRETVEVLRRK*
J055_10137635	J055_101376352	F040117	MWFDVRFGSKFIYLVYLPQLVFCVILYILTPVWRRLDERYHLRYGQGEDDDIEDIEPFVTYQPRKKPMTRRKYADAIKLVYGGNEELDYAPEQPQRYR*
J055_10153960	J055_101539602	F011244	MQPELQKLRAHLRALDAEFEREMRARGFDPTQAENIALPSHLAALYAEREKIKAETEELEGSDE*
J055_10157975	J055_101579752	F003850	MTVPPVYYLHDLGPQAQVMARNCNNDRLAMILQYVALGSMIIMAGVAASQVLKDAFGSSDHEKSHGRSR*
J055_10159194	J055_101591941	F006361	KRMKKRLIITGLITTLFLVAGSSVFSSGDGFNDVVKTIEQFYHVKHKSIPLLVRAGMKAVRTAAKIRGGEYKRMAEAGSFRVAFFEDQTFDSHGEIATFKRSVQTTLGESWLPLAQTMAPKNEEQTYIYFREAGEKFHVLVITIERHDATVVQATIAPKILAELMKNPDEMGKALTDEATISDP*
J055_10172845	J055_101728452	F051807	MILTREEISFLDVYCHEGTEPPFGGPATDAMTRLGIRNGDTLDLQWAYLRDKPPTAPTIGNASQTAPPLPWTNRTAVLRRDAEIRAIREEMQRAGTRQAPVHTDSGVV*
J055_10184170	J055_101841702	F015834	MSADPTDRERAYYQKLMGRQIMAVFWGAIEGRPLPVLLLTGEDRDGNATTVTVLSDPEGNGPGFLDHSI*
J055_10187323	J055_101873232	F041513	MRDDDGRETMIKAVTLSAEETARLDRIYREGGLRKMALPHIHYHEPTCPHAGCNHRFEWIDFQLELFGDVEGINKPLVKAWWEGRGIAGRCLTCDGWIRFTTLAMEPLTDEQAAADLKLPDHWATVAQFG*
J055_10188226	J055_101882261	F053823	MFRIKPFHHITMGVTDIKINSKSKIKKIIQNTKKRKDTGNTLTLNESNPHSKASFLMNLDLIIILPTNIKVGTITEIIK*
J055_10188813	J055_101888131	F084433	EFPAFGRFRPESGNPGLVRVGRSGSFIMSVIVDGQTITSMPFTVREETNSDPFTPGKRFVRGGPFADLAYFSVVPDDPNGEVRFNWWMSLREMPGKGARVTLHLMANGKEIASRTDPVIPSDTDWQFTRHRQISVPTLPRNHWLTLADLTKLNGEIAVVVKANGQPIKTYKTTVSGGQIQRLPRNALNFEPHAEFISPRFIDTSAGTNSQYKMYEMFWLKKQ*
J055_10209677	J055_102096771	F085767	WTRWSWDIIGLLTFIALTVAGFIGLRAWTWSGPLQQLFLGMAIFCWVAIGWMVARVLHVGRGGPIARLRDLVFAFAAAGVLAVSVFFAVESTPVTETVMWRIPIGEGGIAKIEDRALLLPQGMISFEYLQVDHDLIGYHRVIPIAFLGNERLEVKHGGMEKWFLDNLWKHMHGYSERGMSVRSRVEQFLVVPNQEYEVVEREKQVYFRPAAQ*
J055_10220029	J055_102200292	F027309	MSPESRPKKPYEPPAIQTEEIFETTALACAKRPGQSAMCNTRAKNS*
J055_10222146	J055_102221462	F001675	MWDTKRQIIWLIAGISFGTFIVFMDAHDEVGRFEPSVFVFWEIILLVIIVTLFYLYSRKKK*
J055_10237477	J055_102374772	F080131	PVTEVLTSEGYEQTKRKLVELELRLAAIEDRTDLDAEHLASVRRSYKMMMRDYLKEIKLYEAKHSNPNSKSAH*
J055_10243038	J055_102430382	F003495	MNVHAKMNENNEKNIRNWDEISRLMKAFPKDTAAFDSKRVLAKVSSQGSGR*
J055_10262404	J055_102624041	F013351	LINLSVEEENLAGIPFAVLERRVGKRVGRIDIHGTKTLPDGTEAEVLWQVEGNSTLGLPTEQDLDIFVALGVLTFRNNFAKTVVFRGREIAKILRIKNVHGKFYQRLKVAMDRFIPLRFRAVSTSERQEEVKWLNVFQEASFSLNRTTGKCTGMITWTDKLIRSMDSGFFRVLDAGRYMTLDGLTAKHLYRFLAVAFEKTDL
J055_10266858	J055_102668582	F019507	MDVKQLVDIACDEDPRAPCLWVPSDAFVELSQAIRQKPNVAGVMIYRHKTVFDGGPYCDITTQRPR*
J055_10270130	J055_102701301	F015199	GLPSELRGEFDRTAMGLTVQADYLVHEQVLLSGRFDQLWAGGLRDNKLDATVFTAQVRYYPWQNIAFFIRDSVNLRSFEEGNPLRSYRNQVFVGVDWDF*
J055_10274440	J055_102744401	F085764	MALAIGQRITLLKIDEMLAMTHRYEMEVRQVLTPEKVGYEGRKTRLAVIRQRGKRKELYFDVSADDIVLDGWNLPFKTDTETAGVFAGNACYNLVGEPDTIRQCIETQAVIQITDGAKAKIIVAQGERTRCDDEGLALLYPDIDTHHAVVNRMKEA*
J055_10276916	J055_102769161	F009862	MEGFITKQPKEEKPLLVRCPNCKQLREPDYNELTRRYVCSLCAGPVDAQVLIEKKKRGLR
J055_10279993	J055_102799932	F083954	KREKPRTFVIGADFRTDGEARVTKGKDYLVAGGTKITHEETVDVVHEFSKRLRKEGAPDAGTADLILKEVLSERRQRN*
J055_10284112	J055_102841121	F042086	AFLEEFMKASNVENIVVDEVHHVTYVVMGRRVLTDGEMYSAIRVERLRRGGKIPAQGDRVVIVASEMLQYS*
J055_10290782	J055_102907821	F005060	LAATHYAGAFLLLPPALNWLAIAQECLADEDGSLPQGLLSSVFGLVVGLERVFHLDDMEDPGFARLSGGRRCPSRYTVGAWRRHLPWYEVDAFCR
J055_10292883	J055_102928832	F046963	MVLTVQLKDALHSLIDNLMINPQQMRNMASDLKPLAKDDVEVAFGIFVGYVTGGFAELFYESQKRSMTASELIEVRKILFERALEMKKAIAYVRAQESSS*
J055_10308032	J055_103080321	F053355	DYVACGARYETAGSKVVRDEVIGVMNIDDKALTGHPTLEVFSARGLLTRISLGEVPAFAGRHYLLSELLSEKIAPLDLSLRLVDEQATLLMSVLHLDYVRRDLALDHGSDRFSTFIDYPCNAAK*
J055_10321327	J055_103213271	F056385	KVVALQRLDSEVAELGQKGLLADPQLLEISKVTSAARQKQLAELAVEKSLPAGWVKELVKLVRNAEKARHDQDANRYWDFFFEVKEMIEREGPTRDILQLIKNFSVDRPAGVASVQVFESDERRVVNFNKLDLEPGRGLDVGTVNICAAATRKDNQDVVYNIQRNAFLDVRGDSFTKK
J055_10323303	J055_103233032	F067222	MNNQKQFLETLNIYRGKAALQISPSPQVGLIFLNLAQSIPGMESKMPAKAQKKYQWDKKLTVSFNFDGALEVAATAHALMKGREELVTDSQGNLPSWYRDPK
J055_10337180	J055_103371801	F105129	MTIKSPLSGCGVSRRDMLRIGASGLGLGLYGGLGPVPYVLAQASRASAAATSGR
J055_10348293	J055_103482932	F078624	MKLCIHVRPRDDKQGWAVDVFDGRRAWTKTHLGESPLSKVEAHRLAHKLRDPKFYTARTKRAVNSGGVS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001199: Lotic microbial communities from nuclear landfill site in Hanford, Washington, USA - IFRC combined assembly

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences