Sample 3300005225

3300005225: Hotspring Microbial Communities from Lower Geyser Basin, Spring Unknown 43 (Mound Spring), Yellowstone National Park, Wyoming, USA ? Sample 3, bulk metagenomes as controls for mini-metagenomic methods

Overview

Basic Information
IMG/M Taxon OID	3300005225 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114622 \| Gp0115256 \| Ga0073353
Sample Name	Hotspring Microbial Communities from Lower Geyser Basin, Spring Unknown 43 (Mound Spring), Yellowstone National Park, Wyoming, USA ? Sample 3, bulk metagenomes as controls for mini-metagenomic methods
Sequencing Status	Permanent Draft
Sequencing Center	Stanford University
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	93020691
Sequencing Scaffolds	38
Novel Protein Genes	53
Associated Families	35

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	24
All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Thermocrinis → Thermocrinis ruber	2
All Organisms → cellular organisms → Bacteria	5
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Muricauda → unclassified Muricauda → Muricauda sp. M10	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → Viruses → unclassified bacterial viruses → Cyanophage cp-OS	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Communities From The Yellowstone National Park, Bulk Metagenomes As Controls For Mini-Metagenomic Methods
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Near-Boiling (>90C) → Alkaline → Hotspring → Microbial Communities From The Yellowstone National Park, Bulk Metagenomes As Controls For Mini-Metagenomic Methods

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.564833	Long. (^o)	-110.86325	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F015070	Metagenome / Metatranscriptome	257	Y
F019254	Metagenome	231	Y
F020181	Metagenome / Metatranscriptome	225	N
F021443	Metagenome / Metatranscriptome	219	Y
F028182	Metagenome / Metatranscriptome	192	N
F033055	Metagenome / Metatranscriptome	178	Y
F033339	Metagenome / Metatranscriptome	177	N
F036130	Metagenome / Metatranscriptome	170	Y
F040513	Metagenome / Metatranscriptome	161	Y
F041593	Metagenome / Metatranscriptome	159	Y
F043237	Metagenome / Metatranscriptome	156	Y
F050401	Metagenome / Metatranscriptome	145	N
F050402	Metagenome / Metatranscriptome	145	Y
F051766	Metagenome / Metatranscriptome	143	N
F063403	Metagenome / Metatranscriptome	129	N
F069506	Metagenome	124	N
F069691	Metagenome / Metatranscriptome	123	N
F075804	Metagenome / Metatranscriptome	118	N
F080678	Metagenome	115	N
F084856	Metagenome / Metatranscriptome	112	N
F085286	Metagenome / Metatranscriptome	111	N
F086282	Metagenome	111	N
F086364	Metagenome	111	N
F088087	Metagenome	109	N
F092114	Metagenome / Metatranscriptome	107	N
F092122	Metagenome / Metatranscriptome	107	Y
F092976	Metagenome	106	Y
F093431	Metagenome / Metatranscriptome	106	N
F096328	Metagenome	104	Y
F098762	Metagenome / Metatranscriptome	103	N
F100012	Metagenome	103	N
F101227	Metagenome / Metatranscriptome	102	N
F102748	Metagenome / Metatranscriptome	101	N
F104114	Metagenome	101	Y
F104561	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0073353_1000220	Not Available	571	Open in IMG/M
Ga0073353_1000437	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Thermocrinis → Thermocrinis ruber	5404	Open in IMG/M
Ga0073353_1004631	Not Available	890	Open in IMG/M
Ga0073353_1008195	Not Available	5114	Open in IMG/M
Ga0073353_1011128	Not Available	806	Open in IMG/M
Ga0073353_1015813	Not Available	787	Open in IMG/M
Ga0073353_1016114	Not Available	927	Open in IMG/M
Ga0073353_1017653	Not Available	11712	Open in IMG/M
Ga0073353_1019999	Not Available	919	Open in IMG/M
Ga0073353_1022430	All Organisms → cellular organisms → Bacteria	3022	Open in IMG/M
Ga0073353_1026062	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
Ga0073353_1029064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2106	Open in IMG/M
Ga0073353_1033362	Not Available	557	Open in IMG/M
Ga0073353_1035890	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Muricauda → unclassified Muricauda → Muricauda sp. M10	831	Open in IMG/M
Ga0073353_1038504	Not Available	634	Open in IMG/M
Ga0073353_1038864	All Organisms → cellular organisms → Bacteria	5225	Open in IMG/M
Ga0073353_1039734	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	631	Open in IMG/M
Ga0073353_1044916	Not Available	726	Open in IMG/M
Ga0073353_1045459	All Organisms → Viruses → unclassified bacterial viruses → Cyanophage cp-OS	1438	Open in IMG/M
Ga0073353_1047359	Not Available	9993	Open in IMG/M
Ga0073353_1049376	Not Available	1044	Open in IMG/M
Ga0073353_1049509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus	2811	Open in IMG/M
Ga0073353_1053160	Not Available	574	Open in IMG/M
Ga0073353_1058668	All Organisms → cellular organisms → Bacteria	11782	Open in IMG/M
Ga0073353_1061688	Not Available	3530	Open in IMG/M
Ga0073353_1065923	Not Available	780	Open in IMG/M
Ga0073353_1067420	Not Available	4847	Open in IMG/M
Ga0073353_1068231	Not Available	5431	Open in IMG/M
Ga0073353_1070680	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
Ga0073353_1083266	Not Available	640	Open in IMG/M
Ga0073353_1083798	Not Available	528	Open in IMG/M
Ga0073353_1084683	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	911	Open in IMG/M
Ga0073353_1086632	Not Available	506	Open in IMG/M
Ga0073353_1093373	Not Available	2460	Open in IMG/M
Ga0073353_1095088	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Thermocrinis → Thermocrinis ruber	3383	Open in IMG/M
Ga0073353_1096292	Not Available	1537	Open in IMG/M
Ga0073353_1100007	Not Available	665	Open in IMG/M
Ga0073353_1104273	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0073353_1000220	Ga0073353_10002201	F098762	IFHSHSAMVVQYPSLAERVAYPVISENIDYSAIDGSIRAWYPFTRVQNTLTVYGMGVWRDNLYYVAGNKFYRYPTVLLGTLDDEPLITERAYFVPLADVLVVVASGSIYLYDTANGFRKFQPPTPPTNTPTTERVLFTANRGTDYGGTATFTDGTNDYTLADVADSEPGAHRWFGIDLPADRPNYVSEIS
Ga0073353_1000437	Ga0073353_10004373	F043237	MDLEKTAKYIAQLSARGYKYAIIGQLSGYNRKLVKRLEYNGFVFYLCRLQTKKEVIAYCLERAQGTFKVYCLSSKPLEFPNAPLKLWYDEKGQRLRLLAQRSFINACLNAIERASSLTYPSPKLYIAQVNKALRQLYEILAYTYNDKERVRAIRRKVKHWVVEALKSQYGLKPKDAMLDYSRYVLKFSDVLRKKKTQKSASASSDAEGGRIGG*
Ga0073353_1004631	Ga0073353_10046312	F096328	MTEAAYHLSKEAEIILAPYVQHLVGAKDPPRISSPSFAAIWDYAFNDDLLVDLKLACKARSYGKVSHRTLTDIRKSLESGVVVALLVPPRLYLLSPWDITWDGRLEALWNRPSILLPKNVLDRVWDIYSRMTS*
Ga0073353_1008195	Ga0073353_10081956	F063403	MEQTFDRQEALRALRVAIRSVRRTPIRIPFGDDDRFFIEIRIPRFAERLDLQMAAELFLGGYESSERLLRSLPSVITAFRLPAEDDDGNFVQAIYNAEPLPDLPVINLTPADLFSDDSAFNATPALMTVIITTLMTLSGRTQAVAAGVNALLELFPGTNQNSADLLEQGSSGMSGDQ*
Ga0073353_1011128	Ga0073353_10111281	F021443	MKCLLDDSKLNFIFRSSYVTCHNNGYNYYQTNGILSFAIMDLVFKIIKQQKRKSIILKKRRPIIHLLNYIDILNFNFNFNSNISDITFPLKNKHETQLIYDLYLHRNLYRRRYYKDFYKDSLKVIERENLCIIKLEDDYASGIQPKNLNLVAMLMRILEKEEIDMIDIDGIIFYCVFLM*
Ga0073353_1015813	Ga0073353_10158131	F050401	MNWFTRLFTLPKRYNSLSDIARDPFGAITNTAQWAVPLAVGLPGGFSALPKLVNNPALLAKWSLGNAPQLFSVKNAINTQNAMNWFKNPNNLALLVGGLAYLDQSRRARKASAQMDAYRQQLSGLGELERLFNTQLLNRRIGAVGTVLDPSFAIAQLRAVETDTANRLRRMMDTAGVKSQRSVEDALARTAGELSRQRALIPLQYAQATLGIPLGTQYTSLVGSLLGQQRADE
Ga0073353_1016114	Ga0073353_10161141	F015070	MGELERLGFIGVADYIDRQEDWRSPEWKSLNKEFFTVVADNLLDFLWDYYLPL*
Ga0073353_1016114	Ga0073353_10161142	F041593	MASKNTHNELYKLAIAMHKHNGRGVKWNLDYLLSQEQARNNARNNSTQLSLPIH*
Ga0073353_1017653	Ga0073353_10176536	F084856	MMERGDAMSDLSNLMIVTHLYTKEHAEALSLTLSEWRKLAPSSQIIVGYYQSRFQPSDFSNLMQDDAVEFVPVSNSSYGAAYDTLLERTIGKPILILAPYAVPKEWFIGASGSLLKWFESYAIIGRYKQPRILVSDAILMPLVAPVIVELGRLQMDCIAVREDVPRSVGYHEWWFGSILVRARPGAFLLYNALAAGYPVLTLPRNCNPVRYVKPETQMDRKSGKPSGRR*
Ga0073353_1019999	Ga0073353_10199991	F085286	MAKMVVPMDTLQQLLQQARMSGNAELVAQLEQAIRDAKPVKNPNAIDDWDDAREAFQAGNLTIKKEAVREAARVLFAIADQTPQYREKVLQLFSRAMRNGES*
Ga0073353_1022430	Ga0073353_10224302	F069506	MQLEQQTFTDEQIKQAIEEVWQELLQEADAEDYSLEEYLEHYRKYWDEPDFPNDIPEIIMRAVEKIVGRPLSWYCELVRDPAGFTGEYSFVVVDPRTQKCLTYREYTSDGVNVHRFIHVAGTVVDYEDIVRLVTKLLNQIQSALADA*
Ga0073353_1022430	Ga0073353_10224303	F086364	MEREKIIAALETAFAEISGAEYEDEPTTFAQFLESFKKFRDPDFPVYWIPWTVEEAVEELTGRKFGWHEDAFKDEWNYTGEFGFICVDPETLRCLTAERTDDERCAVSVVFPILSIDDAVQAVEYFLRLVQQA*
Ga0073353_1026062	Ga0073353_10260622	F092114	MRELLSITREELEQLLGENPPKRDTWLLKCRRLREIVSNLPSYQIITTSIPEGHSNLLLINITIKAHAMMQLLRGTAIDFGADNEPFQKQFAEFLASNELALRDAILQRLVVGIGAVCVVGDKQRGWRLQSISPNDLWWDCTTGDVMQPKWIAREYRDTDGTRYREVWYADVYHRYKVDSTDVETQHNPYGVIPIVLFPAHYIPDTVYPIGDVELACPQQFILDEIRRTFLNMARRGAGFFAVKQSSIDETELQRLQNPDEVYILVKEQDAIMPIPTPPPNPEWQALETLAKQDMDALMGISEYVRGVLP
Ga0073353_1029064	Ga0073353_10290641	F036130	MSEFPMFGSGDEFLRYMEQLVADIREGRVEDPPYHAVFLANRDEAEESLAYHREEAVRLGFDPDRVVMLRDPTFDDWVVLIPSDQDDAAFEELWGDESDDVIPF*
Ga0073353_1029064	Ga0073353_10290643	F033339	MEMGVQGGSTGDPQIQGRSPNQSLFQGGCIVFRSKLTNLDVGVVVATPSPRVRVLFDNRNHATQKVILYVGFPDKESAERVYSWLITHGYRHYDRATDTGILKPRKAERVSGMAWEIKIHRPTVELVKRFVVKDLAR*
Ga0073353_1033362	Ga0073353_10333621	F092122	MLNTLLRHLGIPSKPEQTQGPDNPDEGKLSAAIETAKEAMEGLAKSTLTAISTIREMASSIGLDPLLEIMRKAYEGLCFVIGLPTT
Ga0073353_1035890	Ga0073353_10358902	F050402	MFLQLPTTRKGAIAERYVRDVLVSKGWHIYTYSADQPHPIDMLAITPDKQLVGVEVKCKCARLYYPDTGIDRNDYYAYHNLQSQLNLPILILFADNYSKTVYGNYLDTLSQPITIVDNQRTLLYPMITEQYVYFPLQVMEHYADIPPAIVAQLNTRTHSKYYHPIPRTTDVDDDGV*
Ga0073353_1038504	Ga0073353_10385041	F043237	LEYDGFVFYLCRLQTKKEVIAYCLERAQGTFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQRSFINDCLNAIEKASSLTYPSPKLYIAQVNKALRQLYAILAYTYNDKERLKAIKKKVKHWVVEALKSQYGLKPKDAMTDYHRYVLKFSDVLRKKVKKNLKP*
Ga0073353_1038864	Ga0073353_10388644	F051766	MAIKKQGIVSGSYAFSGVEDNGLVTLTSPIDDIYIIEIQSLTQLFNFISPYDIPIMVDNTIYQVTNVADYSSASDTLIYSTVNTPRGSKTIIECEIKAIGIKPNSSVIFSTQERWIVYPEKTYQLVDGGTQSFTFTDNSIAYLRLTGKRILPTQLTSAYR*
Ga0073353_1038864	Ga0073353_10388645	F015070	MMEELEKEGFVGIADYVDHPSWESPEWKALNREFFTVLVDDLLDFLWEYYLPL*
Ga0073353_1039734	Ga0073353_10397342	F033055	MMVYPNQVIVNDNWATNTGIGILLALGENDGLYIYNTSPINLLHLGMPQEVVNCELRVQGTGSLFTPPLVLNFYRANNLIDSISVPTTNDWVVHTLTVDRWDSVELMVGIG
Ga0073353_1044916	Ga0073353_10449162	F040513	MNALIQFLDYLVRELEFHYSLQRADSLIDYLDYLDAIVSLEEIRASEEYRKLCK*
Ga0073353_1045459	Ga0073353_10454591	F069691	MTGTPPSNATVEQILVWALLALHTRGSSQTVQEGGEVLPRFSYALAPNAIILRANLPLQEGWPGATGPLWFRVGEAVQGGLPTGF*
Ga0073353_1047359	Ga0073353_10473592	F084856	MERGDAMSDLSNLMIVTHLYTKEHAEALSQTLLEWRKLAPSSQIIVGYYQSRFQPSDFSNLMQDDAVEFIPVSNSSYGAAYDTLLERTIGKPILILAPYAVPKEWFIGASGSLLKWFESYAIIGRYKQPRILVSDAILMPLVAPVIVELGRLQMDCIAVREDVPRSVGYHERWFGSILVRARPGAFLLYNALAAGYPVLTLSRNCSPVRYVKPETQMDRKSSKPYGRR*
Ga0073353_1049376	Ga0073353_10493762	F104114	MERLRLWLSLTQDEKFAAAEKELKDAIVVRYDEFADEWSLVRSVEDFSPGTLAEIIIQTVEALLGLQWQLEWDYDADADDMVWSSGATAYWFKVSDPETGYVLTHKTSGMTGERLRYFKLIETFRDAVQAVVDLADIIAEKLPVVRSQVPLIKEVK*
Ga0073353_1049509	Ga0073353_10495091	F096328	MKDAAYFWSKDAEIILAPYVQVLVGSEKPPQISSPLFAESWDYSFEGLLVDLKLACKARVYGRISDRTLADIRASLVKGVMVALLVPPYLYLLFPQDITWDGRLEALWNRPSILLPKSVL
Ga0073353_1053160	Ga0073353_10531601	F093431	QHGDEYEYVITGTAFYQNAPWQVTGSRVERFRSVGAGVYQWIIETQFVLRRGSLTQTFNEDIVWYITQDRETRQVSVIGYGDTPDSPRIDAELPYQPILPGVIHQNSNFSTTITFEDESQYTKSWQIGGWEDVSTYAGSVGCYRIREEGSWSRPLPFTEATVAATAWFSPQLMNYARIETRESGWIGANPV
Ga0073353_1058668	Ga0073353_105866810	F069506	MQLEQLTYTEEQIKQAIEEVWQELLQEADAENYSLEEYLEDYRKYWDDTCFPNDIPELIMRTVEKIIGRPLSWYCELVRDPAGFTGEYSFVVVDPKTQKCLTYREYTSDGVNVHRFINVAGTVVYYEDIVRLVIKLLDQIQSALADA*
Ga0073353_1058668	Ga0073353_105866811	F100012	MDREKVLQALKEAQAEYNIKNLDRLVREAWEEGDVLYAEIVVELTERAVEILFNQHFLWVHIVESEDCEEWIPDGWYSFVAVHPETGQCLTFLNDPVYRCKSASFRARIRSADDAVDAVMRLAELIERNLKSRAVE*
Ga0073353_1058668	Ga0073353_105866814	F080678	MFVRKVDAKTTPISEVYDDWERIWMGEKEIRRFLAYTGLSAPPYNLRVEHFLKFPFLRGISAGKFMRKLQKLGVTWSFNRDVVRHGVLQAVGYKWRDIEEFEHMRVLVARR*
Ga0073353_1058668	Ga0073353_105866815	F088087	MKASDGSVWLPVTVSSAPCEVCKRKSKSVVYECTEGKWAGVRVVACPEHAEKAIEQFIAGGDE*
Ga0073353_1058668	Ga0073353_105866818	F092976	MMVQEILHWKQELRQVKQEFLQVWQKCPRCGARWVDISWDAESDHEFLLVECRSGHLFRADEQFWLFDCDDYSDAGVYVPSEETETTEVSAYAG*
Ga0073353_1058668	Ga0073353_10586684	F104114	MERLRLWRSMTQDEKFAAAERELKDAVVARYDEFADEWSISRSVEAIAPSALAEIVIQTVEALLGLQWQLEWDYDADADDMELDSGATAYWFKVSDPETGYVLTHKTSGMTGERLRYFKLIETFRDAVQAVVDLADIIAKKLPVVRSQVSLIKEVK*
Ga0073353_1058668	Ga0073353_10586689	F086364	MEREKIIAALETAFAEISGAEYEDEPETFAEFLESFKKFRDPDFPVYWIPWTVEEAVEELTGRKFGWHEDAFKDEWNYTGEFGFICVDPETLRCLTAERTDDERCAVSVVFPILSIDDAVQAVEYFLRLVQQA*
Ga0073353_1061688	Ga0073353_10616882	F104114	MERLRLWLSLTQDEKFTAAEKELKDAVVARYNEFADEWSPSRSIEDIAPGALAEVVIQTVEALLGLQWRLEWDYDADADDMELDSGATTYWFKVSDPETGYVLTHKTSGMTGERLRYFKLIETFRDAVQAVIDLADIIAKKLPVVRGQVSLIKEVK*
Ga0073353_1065923	Ga0073353_10659231	F043237	KRLEYDGFVFYLCRLQTKKEVIAYCLERAQGTFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQRSFINDCLNAIEKASSLTYPSPKLYIAQVNKALRQLYSVLAYTYNDRERLKAIKKKVKHWVVEALKRHGVKPKDAMLDYSRYVLKFSDVLKKKRQSPSPRTAH*
Ga0073353_1067420	Ga0073353_10674203	F080678	MFVKKVDAKTTPIAEVYDDWERIWMGEKEIRRFLAYTGLSAPPYNLRVEHFLKFPFLRGISAGKFMRKLQKLGVTWSFNSDVVRRGVLQAVGYKWRDIEEFEHMRVFGRKEVSAHAGI*
Ga0073353_1067420	Ga0073353_10674204	F088087	MKASDGSVWLPVTVSSAPCEICKRKSRSVVYECTKGKWAGVRVVACPEHAEKAIEQFIAGGEE*
Ga0073353_1067420	Ga0073353_10674207	F092976	MTVQEILHWKHELRQVLQEFLQVWQKCPRCGAKWADTAWDAESDHEWLIVECKAGHLFKADEEFWLFDYNGSGVYVPSEETEMTEVSAHAG*
Ga0073353_1068231	Ga0073353_10682317	F063403	MMHLITIKEAMLIMEQTFDRQEALRALRVAIRSVRRTPIRIPFGDDERFFIEIRIPRFAERLDMQMAAELFLGGYESSERLLKSLPSVITAFRLPAEDDDGNFAQAIYNAEPLPDIPVINLTPTDLFSDDSAFNATPALMTVIITTLMTFSGRTQAVASGVNALLELFPGTNQNSADLLEQGSSGMPGDQ*
Ga0073353_1070680	Ga0073353_10706802	F028182	LRYNVSNMPKVSISEAARRLETTEEVIREWIRLGLLDVELPSAKPRRTRELNLAFQPTSAVPEPKVDLEQLYEVAEREGWLLLSLEAWDAADSEP*
Ga0073353_1083266	Ga0073353_10832661	F043237	AQLSRHGYKYAVLGELSNYNRELVKKIDLEGFVFYLCRLPSKKEVITYCLQKTDKPFKVYCLSSKPLEIPHMPLKLHYDEKTGRLRLLAQKSFINACLNAIEKASEVKYPSPKLFTGHINRILRQLFEVLAYTYNDRERLRAIKRKVKHLFVSALKENYGIEPKKAMEEYRRFVVKFSDVLKRKQRANSSTS*
Ga0073353_1083798	Ga0073353_10837982	F075804	VGLVFVKMLKHISGSLKNTKKYQLWQEAYWLVWLKQALETFTEQHLQLKNPEIRAFVRLQGQVLHIKIAAKEPTVLAALKIAQKALLNFLHQNLPQKAQSFTQLKISFLVK*
Ga0073353_1083999	Ga0073353_10839991	F102748	MMNSLRAICCGRYNRPAVGFSPKPSVLSKLVVVLLVYTLTLLCGQPTVADSASQHTQDVRVYKIRVDYTATIRYTDARGEVQEKSVQRACEFVFDTPISFEEALSLIDGAFVTGVSSHDSLIHDVTEACSEPCCGVWCCWLGRNSKEWAWKPDGIWLASLY*
Ga0073353_1084683	Ga0073353_10846832	F086282	MLIIDQINSLSKRLCSNLVIYRHCPVCDGHGAHRHGVYRRTLPDSAVQKVRVPRFLCLNCRKTFSCLPFCLVRRLGISLSDLIRCAASTEPWAALEETLMIARSTLWRWRHIGKKLLAVMPELVVLAEYSWIEASHKISRIQYPSLLVKPHPTQAGN*
Ga0073353_1086632	Ga0073353_10866321	F020181	QKDDPNWAVYNPPNPQVVYTWLNLDRSFSYSNANAILDADILLRLPTLYRRDYKPLPSGARLPIHIAPDVQDLAKARWNVWRFGQFVADGIKVPTIEAWSRTRQLRAVTYRPLPKLHSGDPIPHRVDSLRYGTMRIPVLNYSPDMIAGYPCPPGGEPREAAGELPRVW
Ga0073353_1093373	Ga0073353_10933735	F040513	MNALIQFLDYLVRELEFHYALKRMDSLIDYLDYLDTAISLEQIRSSEEYRKLQ*
Ga0073353_1093373	Ga0073353_10933736	F015070	MGELERLGLIGVANYIDCQESWVSPEWKSLNREFHTVVVDNLLEFLWEYYMPL*
Ga0073353_1095088	Ga0073353_10950883	F043237	MELERTARYIAQLSSRGYKYAVVGKLARYDKKLVKRLEYEGFVFYLCRFQTKKEVVEYCLERTEGTFRVYCLSAKPLEFPNAPLKLHYDEKTKRLRLLAQRSFINECLRVIERASNLKYPNHKLYTIKVNEALRNLYSILAYTYNDRERLRAIKRKVKHLFVSALKENYGIEPKKAMEDYRRFVVKFSDVLKRKQRANSSTS*
Ga0073353_1096292	Ga0073353_10962922	F015070	MEELEQSGFIGVADYIDRQESWVSPEWKELNQEFYTVVVDNLLDFLWDYYLPL*
Ga0073353_1100007	Ga0073353_11000071	F101227	MTPKSVSAYYVAILFTTVLFQLDGLRWLVISIQQWLISGIQSVTTLSITATVYWIVLFLVTAIITSLFKFFIIDPLELHANDDQTRDWWVWLFALLVFGLFIYTLNLNFDQSMPLELPKFLVKIFQGSRNTPGAEINSLAESNFYSIFPWIWQVGPVIFMYYYASQEKNKKASSS*
Ga0073353_1104273	Ga0073353_11042733	F019254	MPSEKIQEALSYLQDDWPLRVLLSALAERVAELAALLGKAEAQKLPPEFLTGIRAIEEEMHELSRLCQNPPRPEMGNRRKVDSLPLF*
Ga0073353_1109581	Ga0073353_11095811	F104561	PGGDSGYPPVDVLVKVLKHCLEHLGLDVDSNYLQQAQVDSNYLEQAKDLMLFAAALAHIIDVMQARCFDERAYNQNTTRPLPTKLQFGSQGSDTSGTVQFGSQTSDTGGKKSQKLMDDFLKSLYDWICKKAFSDLNKLNPNGHFTVSAYYLIYQAILNQQIPDSEQNLGSALNSMMMNYGSIIKESLAQLGISSR*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300005225: Hotspring Microbial Communities from Lower Geyser Basin, Spring Unknown 43 (Mound Spring), Yellowstone National Park, Wyoming, USA ? Sample 3, bulk metagenomes as controls for mini-metagenomic methods

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences