Sample 3300005275

Basic Information
IMG/M Taxon OID	3300005275 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0060837 \| Gp0052109 \| Ga0065719
Sample Name	Hot spring sediment microbial communities from Great Boiling Spring, Nevada - Cellulolytic enrichment CS 85C
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	93642314
Sequencing Scaffolds	32
Novel Protein Genes	32
Associated Families	7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota	1
Not Available	4
All Organisms → cellular organisms → Archaea	5
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	18
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfitobacterium → Desulfitobacterium dichloroeliminans	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon	1
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → unclassified Methanomassiliicoccales → Methanomassiliicoccales archaeon	1

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Great Boiling Spring, Nevada
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring → Hot Spring Microbial Communities From Great Boiling Spring, Nevada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Great Boiling Spring, Nevada
Coordinates	Lat. (^o)	40.67	Long. (^o)	-119.37	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F019254	Metagenome	231	Y
F027047	Metagenome	196	Y
F063403	Metagenome / Metatranscriptome	129	N
F080678	Metagenome	115	N
F084856	Metagenome / Metatranscriptome	112	N
F088087	Metagenome	109	N
F089858	Metagenome	108	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0065719_100415	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota	14300	Open in IMG/M
Ga0065719_100649	Not Available	8633	Open in IMG/M
Ga0065719_100966	All Organisms → cellular organisms → Archaea	4211	Open in IMG/M
Ga0065719_103267	All Organisms → cellular organisms → Archaea	1882	Open in IMG/M
Ga0065719_106590	All Organisms → cellular organisms → Archaea	51092	Open in IMG/M
Ga0065719_107677	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	2794	Open in IMG/M
Ga0065719_108724	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	2852	Open in IMG/M
Ga0065719_109252	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1256	Open in IMG/M
Ga0065719_109322	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1041	Open in IMG/M
Ga0065719_109419	All Organisms → cellular organisms → Archaea	1206	Open in IMG/M
Ga0065719_109791	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1266	Open in IMG/M
Ga0065719_110511	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	702	Open in IMG/M
Ga0065719_110611	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	947	Open in IMG/M
Ga0065719_111914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfitobacterium → Desulfitobacterium dichloroeliminans	506	Open in IMG/M
Ga0065719_114791	Not Available	1656	Open in IMG/M
Ga0065719_120509	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1403	Open in IMG/M
Ga0065719_120699	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1367	Open in IMG/M
Ga0065719_120935	Not Available	1331	Open in IMG/M
Ga0065719_121037	All Organisms → cellular organisms → Archaea	1317	Open in IMG/M
Ga0065719_121328	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon	1260	Open in IMG/M
Ga0065719_122516	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1129	Open in IMG/M
Ga0065719_123054	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1076	Open in IMG/M
Ga0065719_123834	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1010	Open in IMG/M
Ga0065719_124040	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	991	Open in IMG/M
Ga0065719_124152	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	978	Open in IMG/M
Ga0065719_125616	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	888	Open in IMG/M
Ga0065719_130527	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → unclassified Methanomassiliicoccales → Methanomassiliicoccales archaeon	692	Open in IMG/M
Ga0065719_130693	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	681	Open in IMG/M
Ga0065719_131166	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	679	Open in IMG/M
Ga0065719_134093	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	614	Open in IMG/M
Ga0065719_141361	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	505	Open in IMG/M
Ga0065719_141453	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0065719_100415	Ga0065719_1004156	F084856	MSGTFNLTIVTHIYTSQHAEALKETLPEWVRLSPSQILVGYYQKXFQPSDFQCLETYDGVELVPVDSSSYGAAYDVLLERVVGKPILILAPYVIPKDWFVGSVSKWFESYAIIGHYKQPRILVADAILMPLIAPVVVELGRLQMDCIAVREDVPRSVGYHEWWFGSILVRARPGAFLLYNALAAGYPVLTLPYNCKPVRYVRNPERQSSKAHKK*
Ga0065719_100649	Ga0065719_1006492	F063403	MEGNINRTEALRELRAAIRSVRRTPIKIPFGNSDKFFIEIRIPKFSERLDIQMAAELFLGGFDSSERLVKSLPPLITSFRLPAEDEEGNLMQAVYNAEPLPDLPVLQLEPSDLFSDESAFNATPVLMTLIITTXLTLSGRTQNVAAGMNELLELFPGTNQNATDLLDKGSSRVSGSE*
Ga0065719_100966	Ga0065719_1009664	F089858	MEWVEYLVRLRFHVNGFYPEKLTKEYVEREIRRKLSIPELEEEGLMEVIVSEVGVDGLLNIPVKQGELWVEELKDGRFALNLDDPDEPKITCAEVQLVHEGLEEETIKVRDVKYVILGDIPDMGRARLIRIRKGVREVEEAFNTND*
Ga0065719_103267	Ga0065719_1032673	F089858	MEWVEYLVRLRFHVDGFYAEKLTREXVEREVRXKLSIPEFEESGLMEIIVSKVGVDGLLNIPVKRGELWVEELDDGRFAINLDDPDDPKITCAEVQVVHEDLEEEAIKVKGVKYAILGDIPDMGKARLVRVRKGVREVEEE*
Ga0065719_106590	Ga0065719_10659021	F027047	LSSLGIAVLSAVVYSLSMYVKKHLNTDNPQSFDATKFLTTLIWGAVIGVILQLSGVPITEQSVEEQFIAYAGLIAITENIIKAIIRAVDR*
Ga0065719_107677	Ga0065719_1076773	F089858	MEWVEYLVRLRFHVDGFYAEKLTKEYVEREVRRKLSVPELEEEGLMEIIISKKGFDGLLNIPVKRGELWVEELEDGRFAINLDDPDDPKITCVEVQVVHEDLEEETIKAKGVKYVIIGDVPDMGKARLVRVRKGVREIEEEGGE*
Ga0065719_108724	Ga0065719_1087245	F089858	MEWVEYLARLRFHVNGFYPEKLTREYVEREVRRKLSIPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLEDPDDPKITCAEVQVVHEDLEEETIKTKDVKYVIIGDIPGMGRARFVRIRKGVREIEEEGE*
Ga0065719_109252	Ga0065719_1092521	F089858	MEWVEYLVRLRFHVDGFYPEKLTKEYVEREVRRKLSIPEFEESGLMEIIVSEVGVDGLLNIPVKRGEIWVKELDDGRFAINLDDPDDPKFTCAEVQAVHEGLEEETIKAKGVKYVIIGDIPDMGRARFVRVRKGVREIEEEGGE*
Ga0065719_109322	Ga0065719_1093221	F089858	FHVDGFYAEKLTREYVEREVRRKLSIPEFEESGLMEIIVSETGVDGLLNIPVKRGEXWIKELDDGRFAINLDDPDDPKITCAEVXXVREDLEEETIKAKDVKCVIIGDIPDMGRARFVRIREDVREVEEE*
Ga0065719_109419	Ga0065719_1094192	F089858	MEWVEYLARLRFHVDGFYPERLTRGYVEGEVRRKLSVPELEEEGLMEIIVSKKGFDGLSNIPVKHGELWVEELEDGRFAINLDDPDDPKITCAEVQVVHEDLEEETIKAKGVKYVIIGDIPGMGRARFVMMRRSWGG*
Ga0065719_109791	Ga0065719_1097913	F089858	MEWVEYLVRLRFHVDGFYPERLTKEYVEREVRRRLSIPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLDDPDDPKITCVEVQVVHEDLEEETIKAKGVKYVIIGDIPGMGRARFVRMRKGVREVEEE*
Ga0065719_110511	Ga0065719_1105112	F089858	MEWVEYLVRLRFHVDGFYAEKLTKEYVEREVRRKLSIPEFEESGLMEIIVSEVGVDGLLNIPVKRGELWVRELEDGRFAINLDDPDDPKITCVEVQVMREDLEEETIKAKDVKCVILGDIPGMGRARFVRMREGVREVEEE*
Ga0065719_110611	Ga0065719_1106112	F089858	MEWVEYLVRLRFHVDGFYAEKLTKEYVEREVRRKLSVPELEEEGLMEIMVSDVGVDGLLNIPVKRGEIWIKELDDGRFAINLDDPDDPKITCAEVQVAHEDLEEETIKARGVKYVIIGDIQDMGRARFMRVRRGVREIEEEGE*
Ga0065719_111914	Ga0065719_1119141	F089858	MEWVEYLVRLRFHVDGFYAEKLTREYVEREVRXKLSXPELEEEGLMEIIVSEVGVDGLLNIPVKHGELWVKELEDGRFAINLEDPDDPKITCAEVQVVHEDLEEETIKAKGVKYVIIGDIQDMGRARFV
Ga0065719_114791	Ga0065719_1147912	F088087	MMMLEVTDGSVWREVGVSKSSCEICGRKGSARIYECVEGKWVGVRVVACPEHRERAIEKFISGGEE*
Ga0065719_120509	Ga0065719_1205092	F089858	MGWVEYLVRLRFHVDGFYPEKLTREYAEREVRRKLSIPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELEDGRFAINLDDPDDPKITCAEVQVVREDLEEETIKAKDVKYVIIGDILDMGRAGFVRMRKGVKEVEEEGGE*
Ga0065719_120699	Ga0065719_1206993	F027047	MDLSSLGIAVLSAVVYSLSMYVKKHLNPDNPQSFDVTKFLTTLIWGAAIGVVLQLSGVPITEQNVEEQFIAYTGLIAITENIVKAILRALSR*
Ga0065719_120935	Ga0065719_1209354	F080678	MFVKKVDVRTVPITQAYENWECIWLGEREIRRFLAYTGLTAPPYNLRVENFLKFPFLRGMTARRFVQKLRRLGVTWNNDVMRRSILLAIGYRLLEIEEFEHYRIFGRKEVSVNV*
Ga0065719_121037	Ga0065719_1210372	F089858	MEWVEYLVRLRFHVDGFYAEKLTREYVEREVRRKLSVPELEEEGLMEIIVSDVGVDGLLNIPVKRGEIWIKELDDGRFAINLDDPDDPKITCAEVQVMHEDLEEETIKAKDVKCVIIGDIPGMGRARFVKIRKGVREIEEEEEEGGE*
Ga0065719_121328	Ga0065719_1213281	F027047	VDLSSLGIAILSAVVYSLSMYVKKHLNPDNPQSFDTVKFLTTLIWGIIVGAILQFSGLPITEQSVEEQFIAYAGLIAITENIVKAIVRALSR*
Ga0065719_122516	Ga0065719_1225162	F089858	MEWVEYLVRLRFHVDGFYPEKLTREYVEREVRRKLSIPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLEDPDDPKITCVEVQVVHEDLEEETIKAKDVKCVIIGDIPDMGRARFVRMREGVREVEEGE*
Ga0065719_123054	Ga0065719_1230541	F089858	GLMEWVEYLVRLRFHVDGFYAEKLTREYVEREVRRKLSIPELEEEDLMEIIVSETGVDGLLNIPVKRGELWVRELEDGRFAINLDDPKITCVEVQVVREDLEEETIKAKGVKYVIIGDVPDTWGRLDS*
Ga0065719_123834	Ga0065719_1238343	F089858	MEWVEYLVRLRFHVDGFYAEKLTKEYVEREVRRKLSVPELEEEGLMEIIVSEVGVDGLLNIPVKHGELWVRELEDGRFAINLDDPDDPKITCAEVQMVREDLEEETIKAKGVKYVILGDIQDMGRARFVRMREGVREVEEE*
Ga0065719_124040	Ga0065719_1240401	F089858	REYVEREVRRKLSIPELEEEGLMEIIVSEVGVDGLLNIPVKHGELWIRELEDGRFAINLEDPDDPKITCVEVQVVHEDLEEEMIKAKGVKYVILGDIPGMGRARFVRIREGVREVEEE*
Ga0065719_124152	Ga0065719_1241521	F089858	VDGFYAEKLTREYVEREVRRKLSIPEFEESGLMEIMVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLEDPDDPKITCAEVQVVREDLEEETIKAKGVKYVIIGDIQDMGRARFVRIREGVREVEEE*
Ga0065719_125616	Ga0065719_1256162	F089858	MEWVEYLVRLRFHVDGFYPERLTKEYVKREVRRKLSVPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLDDPDDPKITCAEVQVVHEDLEEETIKAKDVKCVILGDIPDMGRARFVRMREGVREVEEE*
Ga0065719_130527	Ga0065719_1305273	F019254	PLRVLLSALAERVAELAALLGRAEAQNLPPEFLTRIRAIEEEMRELSLLCQRPPAPEGRRKRKKVEDLPLF*
Ga0065719_130693	Ga0065719_1306931	F089858	MEWVEYLVRFRFHVDGFYPEKLTKEYVEREVRRKLSIPELEGEGLMEIIVSEVGVDGLLNIPVKHGELWIKELEDGRFTINLDDPDDPKITCVEVQVVHEDLEEETIKARGVKYVIIGDIQDMGRARFVRMREGVREVEEG*
Ga0065719_131166	Ga0065719_1311661	F089858	MEWVEYLVRLRFHVDGFYAEKLTREYVEREVRRKLSVPELEEEGLMEIIVSDVGVDGLLNIPVKHGELWVKELEDGRFAINLDDPDDPKITCVEAQIVHEGLEEETIKAKGVKYVILGDIPGMGRARFVRMR
Ga0065719_134093	Ga0065719_1340932	F089858	EWVEYLVRLRFHVDGFYAEKLTKEYVEREVRRKLSIPELEEEGLMEIIVSEVGVDGLLNIPVKHGELWVRELEDGRFAINLDDPDDPKITCVEVQVVHEDLEEETIKAKGVKYVILGDIPGMGRARFVRIREGVREVEEGE*
Ga0065719_141361	Ga0065719_1413612	F089858	MEWVEYLVRLRFHVDGFYPEKLTKEYVEREVRRKLLIPELEEEGLMEIIVSETGVDGLLNIPVKRGEIWIKELDDGRFAINLEDPDDPKITCAEVQVVHEDLEEETIKAKGVKYVI
Ga0065719_141453	Ga0065719_1414532	F088087	VIKASDSSVWRSVGVSSSSCEICRKKGRAQIYECVEGKWAGVRVVACPEHAQKAVEVFIAGGEE*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300005275: Hot spring sediment microbial communities from Great Boiling Spring, Nevada - Cellulolytic enrichment CS 85C

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences