Sample 3300007239

3300007239: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B2 RNA (Eukaryote Community Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007239 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114511 \| Gp0116021 \| Ga0075171
Sample Name	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B2 RNA (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	206365719
Sequencing Scaffolds	42
Novel Protein Genes	46
Associated Families	34

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar	2
Not Available	17
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	2
All Organisms → cellular organisms → Eukaryota	4
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia australis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. B-jedd	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Adinetida → Adinetidae → Adineta → Adineta steineri	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida → Stentoridae → Stentor → Stentor coeruleus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration
Type	Engineered
Taxonomy	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent → Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Milwaukee, Wisconsin, USA
Coordinates	Lat. (^o)	43.023	Long. (^o)	-87.895	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003009	Metagenome / Metatranscriptome	513	Y
F003657	Metagenome / Metatranscriptome	474	Y
F007408	Metagenome / Metatranscriptome	351	Y
F010447	Metagenome / Metatranscriptome	303	Y
F013276	Metagenome / Metatranscriptome	272	Y
F022892	Metagenome / Metatranscriptome	212	Y
F024036	Metagenome / Metatranscriptome	207	Y
F026814	Metagenome / Metatranscriptome	196	Y
F027186	Metagenome / Metatranscriptome	195	Y
F030999	Metagenome / Metatranscriptome	183	Y
F033437	Metagenome / Metatranscriptome	177	Y
F036109	Metagenome / Metatranscriptome	170	Y
F039671	Metagenome / Metatranscriptome	163	Y
F040484	Metagenome / Metatranscriptome	161	Y
F040485	Metagenome / Metatranscriptome	161	Y
F044934	Metagenome / Metatranscriptome	153	Y
F051728	Metagenome / Metatranscriptome	143	Y
F051950	Metagenome / Metatranscriptome	143	Y
F051952	Metatranscriptome	143	N
F057918	Metagenome / Metatranscriptome	135	Y
F057919	Metagenome / Metatranscriptome	135	Y
F059886	Metagenome / Metatranscriptome	133	Y
F061006	Metagenome / Metatranscriptome	132	Y
F065810	Metagenome / Metatranscriptome	127	Y
F070166	Metatranscriptome	123	N
F073141	Metagenome / Metatranscriptome	120	Y
F085200	Metagenome / Metatranscriptome	111	N
F085201	Metagenome / Metatranscriptome	111	Y
F087278	Metagenome / Metatranscriptome	110	Y
F091427	Metagenome / Metatranscriptome	107	Y
F093339	Metagenome / Metatranscriptome	106	Y
F100471	Metagenome / Metatranscriptome	102	Y
F101221	Metatranscriptome	102	N
F102609	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0075171_1005532	All Organisms → cellular organisms → Eukaryota → Sar	1107	Open in IMG/M
Ga0075171_1023234	Not Available	544	Open in IMG/M
Ga0075171_1024760	Not Available	568	Open in IMG/M
Ga0075171_1026915	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1249	Open in IMG/M
Ga0075171_1030005	Not Available	571	Open in IMG/M
Ga0075171_1038316	Not Available	678	Open in IMG/M
Ga0075171_1039810	Not Available	638	Open in IMG/M
Ga0075171_1045382	All Organisms → cellular organisms → Eukaryota	1024	Open in IMG/M
Ga0075171_1071522	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia australis	508	Open in IMG/M
Ga0075171_1075772	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	679	Open in IMG/M
Ga0075171_1128659	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	501	Open in IMG/M
Ga0075171_1251598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. B-jedd	559	Open in IMG/M
Ga0075171_1259758	Not Available	628	Open in IMG/M
Ga0075171_1259907	All Organisms → cellular organisms → Eukaryota	516	Open in IMG/M
Ga0075171_1345097	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	956	Open in IMG/M
Ga0075171_1345999	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Adinetida → Adinetidae → Adineta → Adineta steineri	754	Open in IMG/M
Ga0075171_1359430	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1600	Open in IMG/M
Ga0075171_1377414	Not Available	759	Open in IMG/M
Ga0075171_1378384	Not Available	802	Open in IMG/M
Ga0075171_1381618	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1064	Open in IMG/M
Ga0075171_1383327	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	821	Open in IMG/M
Ga0075171_1383541	Not Available	788	Open in IMG/M
Ga0075171_1384087	Not Available	1097	Open in IMG/M
Ga0075171_1389865	Not Available	559	Open in IMG/M
Ga0075171_1390875	All Organisms → cellular organisms → Eukaryota	522	Open in IMG/M
Ga0075171_1399435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	506	Open in IMG/M
Ga0075171_1402782	All Organisms → cellular organisms → Eukaryota → Opisthokonta	584	Open in IMG/M
Ga0075171_1407235	Not Available	829	Open in IMG/M
Ga0075171_1425439	All Organisms → cellular organisms → Eukaryota → Sar	500	Open in IMG/M
Ga0075171_1426136	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	553	Open in IMG/M
Ga0075171_1429018	Not Available	582	Open in IMG/M
Ga0075171_1435740	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida → Stentoridae → Stentor → Stentor coeruleus	554	Open in IMG/M
Ga0075171_1436710	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1306	Open in IMG/M
Ga0075171_1439456	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1879	Open in IMG/M
Ga0075171_1442411	All Organisms → cellular organisms → Eukaryota	2059	Open in IMG/M
Ga0075171_1449729	Not Available	665	Open in IMG/M
Ga0075171_1454406	Not Available	853	Open in IMG/M
Ga0075171_1455338	Not Available	1020	Open in IMG/M
Ga0075171_1456343	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	986	Open in IMG/M
Ga0075171_1457180	Not Available	772	Open in IMG/M
Ga0075171_1467684	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1229	Open in IMG/M
Ga0075171_1481663	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2097	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0075171_1005532	Ga0075171_10055322	F093339	MNLSSTLFNNLADKLKFEVSLLQKEKVYVKNLLTQVTYLKKLKENDFKNLSVTKYILNNDKKINPQDFMIMYIINISFSKANTVINVSDIQGNLKIFYSAGSVQLSGKQKRKRRIAILKLISLVLKKATFLGRKPIALHLNNVNFYKNLIVRKLKRNLHIRVLKIFNQISYNGCRTSYFFRSKTDCITFK*
Ga0075171_1023234	Ga0075171_10232341	F061006	GQSPKERANDIDNVLQWMRNRGVDQPEFKDEPFQTAKQMPLPDRRSPEQKAKDLDDVLQWVRNPRDSDSPSTEAFKRIDQLLPEKPGQSPEDRAKDLDNALTWVRNRGVDRPEFEATPTFDKLNSLPFDRRTPEQKARDVDDILNWKRDPRDIESPETEPFKRIDQMLPEKPGQSPKERA
Ga0075171_1024760	Ga0075171_10247601	F057918	MPKLSKKAIYIKEYETVVASRVRKACIRFYLDDEDSFEDEIDECMLRELAVLKEARYILQGSHRQWETTWERVLYDGKYLTDDEFLSHFRMDRSCVMQLNSLIENDQEFRSVAGKLGKRSSILHVMVLLKFLGSYGNDATLAKLGLMLGISKGAVNDYVRRACNAILKHRDTVIKWPS
Ga0075171_1026915	Ga0075171_10269151	F024036	DAFLKEIQDAYTMFVFIYFLHHFNPSTVNYFFFERNIAELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMGLFFVLLAFLPIIYNYNVYNKHIPTIPMQNSLIQTSAFIIFMLSLFCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYLAFVHHLDLIDHFIFQFFQIFIRKSLRLYKKNMRAAKKYLSRFAYYDIKQKNYDSLLFTNKIYLINKNSNFQK
Ga0075171_1030005	Ga0075171_10300051	F061006	NPKANDSPETEPFKKIDQLLPKKPGQTLEDRAKDIDNVLTWMRNGGVDEPKFGPNEPFRPTKNIDMPDKRSPIEKARDIENITNWVRNPKDNDGPETEPFKKIDQLLPKKPGQSPEDRAKDIDSALTWVRNRGVDQPLFDSPSSFTPLSNLPIDRRTPEQKARDVENILNWKRNPKANDSPETEPFKKID
Ga0075171_1038316	Ga0075171_10383162	F022892	ANNIGVFKTIEPPHKVANQENIFIPVGTAIIIVAAVK*
Ga0075171_1039810	Ga0075171_10398101	F051952	FEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0075171_1045382	Ga0075171_10453823	F027186	MVANLDFNFKKNNDNLTLELPFSEHVEELRQRISHIFWVILLLTCVAFF
Ga0075171_1071522	Ga0075171_10715221	F087278	ARDVEDILNWKRNPKEHDSPKTEPFKKIDQLLPEKPGQSPKERANDIDNTLTWLRNRGVDEPQFGPEEPFKKTKNLPMPDTRSPDQKAKDLDDIMNWIRNPKEHDSPKTEPFKKIDQLLPEKPGQSPEDRAKDIDNALTWVRNRGVDQPSMEPTSPFDKLNSLPIDRR
Ga0075171_1073895	Ga0075171_10738951	F087278	PGQTPEDRAKDIDSALTWVRNRGVDQPLDESLSPFKPLNSLPIDHRTPEQKARDVENILNWKRNPKEHDGPETEPFKKIDQLLPDKPGQTPKDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPTKSIDMPDKRSPTEKARDVENITNWVRNPKDNDRPETEPFKKIDQLLPKKPGQTPEDRAKDIDSALTWVRNRGVDQPLDESLSPFKPLNS
Ga0075171_1075772	Ga0075171_10757723	F024036	FFILLAFLPLIYNLYNNSNKHIPTIPMQNSLLQTFAFITFMMSLFCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYLAFIHHLDLIDHYLFQFFQTFIRKCLKLYNKNLEHLKTSNLKFINFNVTKKNYFNLIFNNKVYSVNLRK*
Ga0075171_1128659	Ga0075171_11286591	F085201	ECYVQTSKHAPYGLSNAQKQVAIDLLLHGKDGELDRKDVVYDSDELLENRVFEKDQKIDCLDTDLNWLNALVFDTHPQKGVYVKYDGWSDKWNEWLPVTSPRIAKFGSMTQFNPPKKQKQKNT*
Ga0075171_1251598	Ga0075171_12515981	F010447	NMLTRRSFVIVYLNILLLAAVATLCVVQVMSNTKTIEKRQYFDTLGLLCSSDDDCGDNGQCVSLNEGDDQFGERYCSCNDGYTHLQKICDHKRVPQFNAFLASFFGGMVGADWFFLYQQGETKFTNGGYIAAGIFKLLTGGGFSIWIIVDWIRVLTMTFPDAHGMALYENLTNTDL*
Ga0075171_1259758	Ga0075171_12597581	F040485	ALAFAATPSTPVWPAAFAANILASDNQGNQRFFRWVYSSTLAKERIEGMVPWNDQQYYAEQIRDYASDNQYDIFYQQEYASCFTHPINGTVPHPNFSQFTYMGQALVQYDTVYHWGFYDKTNNFTMNYFDVQSTREPKRFDLSDLNRGWSETWVYMGFDDEPQDPSLFTVPSQLLPLCNAVTVPPKKF*
Ga0075171_1259907	Ga0075171_12599071	F026814	AVAANPSAPTWPRSFSATAIFHESGARRPGFSRWFYSAAQNIDRLDGLTEWEGELYFAERFFNHNTQREYNVFYQRDTVSCFSRPLNNPLPKPDFTNWTYVGESLIDYVPVYHWIYRRGRDFFQFFDSVSSRVPVRFDAEIDRRPAIQIIYAEFDSAPQNPAIYVIPQAIL
Ga0075171_1304164	Ga0075171_13041641	F102609	SLTAGVVIEPSTLEFSKSQLSDPVQSFSIKHTNPRVFTTKRQYALQWLLRYAGTPTSSAVDITSIVSQDAQNVLLSRYQIIPKFPHVLSYNWQKASFNLSHIPVAHVSFTPRIPPVDGDSDVRGATTPAGRVDFEPPVLVAAPGQQIIEFKVKAQPGIDRDNLYYRVDWEVHGHADDLVNWVEWLQDGATGFNNGDQITFATWHLAPASATTVSVALIMIVCVLALARN
Ga0075171_1345097	Ga0075171_13450971	F051950	MWGCISTEASYQLNFNTGFSTTKSDVLIHLAQQY*FFAFLSFYYLVISKIVRYRTLKMRPKIVTSYRPHGKGDFLAAIIPGICLNILTNSNFILRLVEQNESSLFLVRIRARQWYVYKFELKNFTDILIAPKNLGRNKWQLNTFGDLSTTDDYLHVLQLRSQNRIKSY*DSVISRAGKVKQNHSLTPVELFRFHLNNSKNLSEVNSILIEKLNPTLTPYISSTYFSRLLSKKLSFSSTFDYNSNYLFSFDSFISSKFLTHFSSSSKSLIELNCNLFNNFLQL
Ga0075171_1345999	Ga0075171_13459991	F003657	FKSLGTKQIQRTMSYEPLNRRLAILASVFAFLGVVLGVIALGTNYWTHNYTVAPSVFNDTGMAVRSYNGTTWNGLFKTCYADLPCESNFLALTFILCLLGLLFLLAGGIFSVLDVPKASDRRFITPLLIFIGCVLLTSGLFDYASMRFLNYHSSRAMIAALVFCYTALPISAFVAGRYSALERSVLINNDAHGTQKYSATNGNGL*
Ga0075171_1359430	Ga0075171_13594302	F091427	MLITGVYYAGISTTISLTNLLVTRRTLAMPGLRNRRILLPFTSITILLMLRALAIITPVLGSAMLMLLLDRH*
Ga0075171_1377414	Ga0075171_13774141	F073141	NYVTELYNLNNISQEEIKLWNDAYSYKGFDRTKVMKDLMRKVPDVKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGLKGSDGVSCQRITAATADLCAYLLKQANVPKRMNVPLPGWLQFPSAGSIKMPQELRLMHIDFAKRFSTVIGGQFNEQIYDQMAANSYLNDNLNLFNNIEMYLQQSATTTVLPVAAVTFNPARGDVNPPRTVDSSKVKPSGR*
Ga0075171_1378384	Ga0075171_13783841	F100471	MSKPGATPLPSAGNEPGIRTRNPRNVPLNTSLPQDVGSVPAAATTIPEVKEDVLNAFMIELYNVNNITNEDLLSIYEALRYKGFDRKEVLKQLAVVTKSTRLSTEIIIAVALQGPQRASRAKLTNGLTPIQMGIPASGGQGTKTLTLNKILSATADLAAFFMKKLNVPKRMLNDLPGWLQFPSAGSIKMPEAYRQMHIQFSKNFSELIGGSFNEQIYATMQANAYLEPSLSLFD*
Ga0075171_1381618	Ga0075171_13816181	F003009	NKGPYYTLGVKSIYQYFAVLAVSFHDINSLFGFFTFLVIASQLISGTMLAFSLLPEPMLIPMVRDEEDSEDLYTEDFF*
Ga0075171_1383327	Ga0075171_13833271	F044934	FITPFSSNLKYTGYGAQDLAVLGVIFAGVSTTISFTNLLITRRTLSMPGLRHRKSLIPFLSLALFLTMRMLALITPVLGAAMIMLSMDRH*
Ga0075171_1383541	Ga0075171_13835411	F100471	IDILKEDKMSKPGATPLPISGNEPGNRTRNPRNIPLNTSVPQDVGSVPAAATTVPEIKEDILNAFMTELYNVNNITNDELANIYEALRYKGFNRTEVIKQLAVVTKNTRLSTEIIIAVALQGPQRASRTKLTNGMTPIQMGIPASGGQGTKTLTLNKILSATADLAAFFLKRLNVPKRMLSDLPGWLQFPSAGSIKMPDNYRQLHIQFSKNFSELIGGFFNEQIYATMQANAYLEPGLKLFE*
Ga0075171_1384087	Ga0075171_13840871	F007408	RKKQEGKEVEEEKDTKAKIGDVVHKWKFQKTEIGKTLYDNLVKMPTVDAVKSTSDEITSKLRDAVRKPLDAIVEVLCGTVFVQDYWVQWQIWWMARKITNLICEITTLDGFLEAAQKLADAVQKHVNEEGGKCIGKKEELDKFVEGASAALWKALADQAVGLWTKIYKLSENINNLFSEQSEEVTEPLIELLSHIFEVQVRGFNAIRVTYTTKLKESIGEAKDHDALKAASSEAIRHAIFENVNILAEEFWVKTHEAVVEASKAYVRERFLKDIWPSIKSGLDDLLSLLPEELKSLGVDVAGMVLKVAIIIINKGVTWALTKIGMRMENAIFEQEE*
Ga0075171_1389865	Ga0075171_13898651	F087278	PFHVLNSIPIDRRTPEQKARDVEDILNWKRNPKEHDSPLTEPFKKIDQLLPEKPGQSPEARANDIDNTLTWLRNRGVDEPKFGPEEPFKTTKNVRMPDNRTPEQKAKDLDDILSWVRNPRDTESPETEPFKKIDQLLPKKDGQSPEDRAKDIDNALNWVRNRGVDQPSFEPTSPFHVLNSIPIDRR
Ga0075171_1390875	Ga0075171_13908751	F085200	YNMKKQAEDEKPQGAEGARFGNGKQGFKKRHNNKHKSQEPNTAGEFFKGFGVSIGPHRPEMYQKTVQKVGLYTSMQFKNGSDITICLLEEKLVKPEVPVLEEEHTAHEKRLWEYRMNELMKTEKLLEGNLRSLFMVLMSLCDSTTKNKIENTSEYPKLMKRLNSLGLLSVIKK
Ga0075171_1399435	Ga0075171_13994351	F003009	NLKKVNEMLLLYFSTLSVSFHDFMSLFGFFTFLIIANQLVSGTMLAFSLVPEPMMIPLVRDEEDSEDLFIDDFF*
Ga0075171_1402782	Ga0075171_14027821	F030999	LIILGLVALSSVAIAENSYLIFAPKLFKVGWDNQLSVFIAAASQPVEVKYILTVGPKTVEGKITVNAGETRNATLALPTDFPIGPGELIMTGTGGIRFEERRDLIVYDNRHVILVQTSSSTYRPGDNMEVRVVVTSDELMPVEKGEVLVEIYDAALKLIGRFPQLAIKSGMTENIRFPINEHCNIGTWLVSATV
Ga0075171_1407235	Ga0075171_14072351	F073141	PLKIKSIHNLNMSSIDNKSNEDELLRNYVTELYNLNNISQEEIKLWNDAYSYKGFDRTKVMKDLMRKVPDVKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGLKGSDGVSCQRITAATADLCAYLLKQANVPKRMNIPLPGWLQFPSAGSIKMPQELRLMHVDFAKRFSTVIGGQFNEQIYDQMAANAYLNDNLNLFNNIDAYMQQSGMATSLPMPAVTFNPARGDVNPPKTIDSSKVKPTGR*
Ga0075171_1425439	Ga0075171_14254391	F065810	SIHQQSNKLCSKNNLYPNPTELTSKTFQIKYEKPLSSVAKFLLNSFQNKYLYYAIDDLLYLLNSNVSERDNLLALLYSPVLSLQNNLSINFFDIWIQEIYINEIVNTNKFLNNNTQNFESVNYIIIKLLYRTKIPVKKQESLW
Ga0075171_1426136	Ga0075171_14261361	F013276	EVKMKALLFLALFFTLSFCQIQLLSPHGRGYSEFYSHYAPCGQGSTEVGSSIQFEHGTVHQIQVQVIGAGGGGVIFDRWSCVLNGDDENNLGPVFPIEGAMKVSVPYADFQIYNLFVQAPGYRCVGQATMQLVYATNNGQEYYQCQDVIITNTNGSSMLAANLVFVLLAIAGVLLL*
Ga0075171_1429018	Ga0075171_14290181	F101221	NHTMVQLNKNINLYKERAWRVITYNAHLSENGSTGLYTLSTGSDQRYLTFATLLSSDEFVNMAIPYNEFRIHKAVFTSLSPQRSDRIPYLYVNVEPSNTAANPNNVRVCAADTSRIMSPRSLLPEAVEYDLRGVGTTTNIWIDTGSTNIPGQFNIGNYINGTLPVSINWEVKFQLIVEFTNPK*
Ga0075171_1435740	Ga0075171_14357401	F051728	LEGLKNKSFFDNIRSLKVKSSLEGIVKRTMRDASQRVIGGGNKVKGAMQSLINGLNNIPKKALRRWSKVVDDIKNKRLFDNARSAKLQNSLERIQRRTLKEAAERLKGLIFASAAVKATIKRLDGLLKRKPKQAFDKWRKYVQAVNNKEVLDGVKSRELKAKLDKVTRRTLRDATERILGDGSK
Ga0075171_1436710	Ga0075171_14367102	F003009	NRGPYYSFSIKSIFQYFAILSVSFHDIHSLFGFFTFLVVVSQLVSGTMLSFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075171_1439456	Ga0075171_14394562	F036109	CMPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075171_1442411	Ga0075171_14424113	F039671	MNEPLGIITLITPPTVSIPKLNGVASIITISFEPSSDSSPQITPPWTAAP*
Ga0075171_1449729	Ga0075171_14497291	F070166	VQIHKRTKRITLQRFLVSKIAYGKDFSLVELAALFHNQLWLQTKCSTDAQFRERYGNTLEALAKILKDCNFSRGLQPGTIKSVKAKLLAQEWDFLFPQRNMQNMEAQLRNSIFTTWRKPQGVETSKLPPKKHIGKGYRDHGTAPKPELDGSPSWQEVGSEFSNLEREDTENLLFLQKVVSGEIVYEPGTNKEIISRIKRTIQVKEAIKRIDPNWRNTQIAE
Ga0075171_1454406	Ga0075171_14544061	F073141	PHSPRLNSNSIHIQNMTSIDNKTNEDELLRNYVTELYNLNNITPEEIKLWNDTYSYKGFDRIKVMKDLMKKVPDIKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGMKGSEGVSCQRITAATADLCAFLLKQANVPKRMNIPLPGWLQFPSAGSIKMPQELRQMHIDFAKRFSTVIGGQFNEQIYEQMAANSYLNENLNLFSNIEAYMQQPAQSNVLPVPAPTFNPARGDVNPPKTADSSKVKPAGRGM*
Ga0075171_1455338	Ga0075171_14553381	F040484	PTTDMALAFKRAVSEAQTAVDAANKSIQGWYKPPMDPALVFDFEAMKAIEGVSKQNPNSVEGPKNITCVNWVKENCSNFHSVWGDVQYKDKKYALAIINKHLDKVVVHVDDKGVAGKYNSYNVEWKGKELHITVHLDFTNYPQRLNLTDEKAGAGHVDWQVWDHLDEVGNITYEIRKSTMIDYEHSPLNKYKKDLAAKVKKDIPLDVDWDSVFALTGKSCEYANKPDVPNRARGVNLLGDDGKALYNTYYAIETLVKDAMGMEAFLETFDKVLVVIQPGVHADFSGESVIVTKEGKTLKFAFKFATINLANARFDYSKMAKMIEAML*
Ga0075171_1456343	Ga0075171_14563431	F036109	NLLITRRTLCMPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075171_1457180	Ga0075171_14571801	F059886	VIYASRAASAILRGGRHQLSPTIPRSPGIIPAVLSVAPFRPLRFDCS
Ga0075171_1457180	Ga0075171_14571802	F033437	ALAFAGGVLPDATLRGMRMSRSHGGTVLTVAGRDLSSEASAPGSDAPCREHRAGRGADTPATNISRVGTLTTGTAPACDRPLAPRYGSDLLPLRLHFAFAAG*
Ga0075171_1460463	Ga0075171_14604631	F057919	FFTFLVVASQLVSGTMLSFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075171_1467684	Ga0075171_14676842	F036109	MPGLRNRRILLPFVSIGLFLALRMLAIITPVLAAAMIMMALDRH*
Ga0075171_1481663	Ga0075171_14816632	F044934	LIIAVILAGVSTTISFTNLLITRRTLSMPGLRNRRVLLPFLTITLFLTMRMLTLITPVLGGAMIMLYLDRH*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007239: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B2 RNA (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences