Sample 3300008417

3300008417: Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12T

Overview

Basic Information
IMG/M Taxon OID	3300008417 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111382 \| Gp0136557 \| Ga0115363
Sample Name	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12T
Sequencing Status	Permanent Draft
Sequencing Center	Shell Corporation
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	902097346
Sequencing Scaffolds	71
Novel Protein Genes	78
Associated Families	62

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Predicted Viral	8
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
Not Available	38
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED67	2
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	3
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1
All Organisms → cellular organisms → Archaea	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → Viruses → environmental samples → uncultured virus	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations
Type	Environmental
Taxonomy	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment → Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine cold seep biome → cold seep → marine sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Gulf of Mexico
Coordinates	Lat. (^o)	27.4	Long. (^o)	-93.2	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000161	Metagenome / Metatranscriptome	1845	Y
F000352	Metagenome / Metatranscriptome	1247	Y
F001135	Metagenome / Metatranscriptome	767	Y
F001487	Metagenome	686	Y
F001740	Metagenome / Metatranscriptome	643	Y
F002344	Metagenome / Metatranscriptome	568	Y
F003492	Metagenome / Metatranscriptome	483	Y
F005351	Metagenome / Metatranscriptome	403	Y
F005454	Metagenome / Metatranscriptome	400	Y
F008424	Metagenome / Metatranscriptome	333	Y
F008795	Metagenome	328	N
F008944	Metagenome / Metatranscriptome	325	Y
F009067	Metagenome	323	N
F009424	Metagenome / Metatranscriptome	318	Y
F009959	Metagenome / Metatranscriptome	310	Y
F010686	Metagenome / Metatranscriptome	300	Y
F012984	Metagenome / Metatranscriptome	275	Y
F013647	Metagenome / Metatranscriptome	269	Y
F015413	Metagenome / Metatranscriptome	255	Y
F015742	Metagenome / Metatranscriptome	252	Y
F016667	Metagenome / Metatranscriptome	245	Y
F017160	Metagenome / Metatranscriptome	242	Y
F018527	Metagenome	234	Y
F022979	Metagenome / Metatranscriptome	212	Y
F023598	Metagenome / Metatranscriptome	209	N
F024951	Metagenome	203	Y
F026898	Metagenome	196	Y
F036784	Metagenome	169	Y
F039177	Metagenome	164	Y
F040581	Metagenome / Metatranscriptome	161	N
F041287	Metagenome / Metatranscriptome	160	Y
F045770	Metagenome / Metatranscriptome	152	Y
F046978	Metagenome	150	Y
F050306	Metagenome	145	N
F052600	Metagenome	142	Y
F054974	Metagenome	139	Y
F056035	Metagenome / Metatranscriptome	138	Y
F056621	Metagenome	137	Y
F058199	Metagenome / Metatranscriptome	135	N
F059466	Metagenome / Metatranscriptome	134	Y
F060828	Metagenome	132	Y
F060833	Metagenome	132	N
F069692	Metagenome	123	Y
F074900	Metagenome	119	Y
F077318	Metagenome	117	Y
F077934	Metagenome	117	Y
F078263	Metagenome / Metatranscriptome	116	N
F078600	Metagenome / Metatranscriptome	116	Y
F078608	Metagenome	116	Y
F080156	Metagenome / Metatranscriptome	115	Y
F082876	Metagenome / Metatranscriptome	113	Y
F084100	Metagenome	112	Y
F084258	Metagenome	112	Y
F090258	Metagenome / Metatranscriptome	108	Y
F091889	Metagenome / Metatranscriptome	107	Y
F092078	Metagenome / Metatranscriptome	107	Y
F092715	Metagenome / Metatranscriptome	107	N
F093218	Metagenome / Metatranscriptome	106	Y
F096221	Metagenome	105	Y
F099322	Metagenome / Metatranscriptome	103	Y
F103292	Metagenome	101	Y
F103884	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0115363_10001657	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
Ga0115363_10002703	All Organisms → Viruses → Predicted Viral	1680	Open in IMG/M
Ga0115363_10005070	All Organisms → Viruses → Predicted Viral	1278	Open in IMG/M
Ga0115363_10005430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1241	Open in IMG/M
Ga0115363_10005895	All Organisms → Viruses → Predicted Viral	1879	Open in IMG/M
Ga0115363_10007508	Not Available	1089	Open in IMG/M
Ga0115363_10008043	Not Available	1066	Open in IMG/M
Ga0115363_10008379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	1047	Open in IMG/M
Ga0115363_10008529	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
Ga0115363_10009454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED67	1002	Open in IMG/M
Ga0115363_10009667	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1001	Open in IMG/M
Ga0115363_10012470	Not Available	909	Open in IMG/M
Ga0115363_10014050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	917	Open in IMG/M
Ga0115363_10015617	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	842	Open in IMG/M
Ga0115363_10018493	Not Available	797	Open in IMG/M
Ga0115363_10019220	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
Ga0115363_10019422	Not Available	829	Open in IMG/M
Ga0115363_10019582	Not Available	782	Open in IMG/M
Ga0115363_10022320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	750	Open in IMG/M
Ga0115363_10024995	Not Available	727	Open in IMG/M
Ga0115363_10033165	All Organisms → Viruses → Predicted Viral	1655	Open in IMG/M
Ga0115363_10037899	Not Available	634	Open in IMG/M
Ga0115363_10041268	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	807	Open in IMG/M
Ga0115363_10042767	Not Available	609	Open in IMG/M
Ga0115363_10043045	Not Available	608	Open in IMG/M
Ga0115363_10045280	Not Available	598	Open in IMG/M
Ga0115363_10048851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas	583	Open in IMG/M
Ga0115363_10048922	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	711	Open in IMG/M
Ga0115363_10051742	Not Available	573	Open in IMG/M
Ga0115363_10051949	Not Available	572	Open in IMG/M
Ga0115363_10053183	Not Available	568	Open in IMG/M
Ga0115363_10054457	All Organisms → cellular organisms → Archaea	937	Open in IMG/M
Ga0115363_10054519	Not Available	564	Open in IMG/M
Ga0115363_10055363	Not Available	562	Open in IMG/M
Ga0115363_10056994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED67	558	Open in IMG/M
Ga0115363_10057252	Not Available	557	Open in IMG/M
Ga0115363_10068803	Not Available	991	Open in IMG/M
Ga0115363_10071068	Not Available	530	Open in IMG/M
Ga0115363_10076966	Not Available	520	Open in IMG/M
Ga0115363_10077859	Not Available	519	Open in IMG/M
Ga0115363_10079028	Not Available	517	Open in IMG/M
Ga0115363_10088262	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	505	Open in IMG/M
Ga0115363_10093698	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	500	Open in IMG/M
Ga0115363_10175884	Not Available	526	Open in IMG/M
Ga0115363_10221323	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523	Open in IMG/M
Ga0115363_10237096	Not Available	591	Open in IMG/M
Ga0115363_10316468	Not Available	868	Open in IMG/M
Ga0115363_10323285	Not Available	629	Open in IMG/M
Ga0115363_10408291	All Organisms → Viruses → environmental samples → uncultured virus	508	Open in IMG/M
Ga0115363_10432526	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	521	Open in IMG/M
Ga0115363_10448168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	570	Open in IMG/M
Ga0115363_10448436	Not Available	819	Open in IMG/M
Ga0115363_10448572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → environmental samples → uncultured Woeseiaceae bacterium	581	Open in IMG/M
Ga0115363_10462065	Not Available	516	Open in IMG/M
Ga0115363_10462743	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
Ga0115363_10465437	Not Available	848	Open in IMG/M
Ga0115363_10466320	All Organisms → Viruses → Predicted Viral	1233	Open in IMG/M
Ga0115363_10476146	Not Available	664	Open in IMG/M
Ga0115363_10483186	Not Available	588	Open in IMG/M
Ga0115363_10485064	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	573	Open in IMG/M
Ga0115363_11479737	Not Available	504	Open in IMG/M
Ga0115363_11669178	Not Available	589	Open in IMG/M
Ga0115363_11682042	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
Ga0115363_11682263	Not Available	731	Open in IMG/M
Ga0115363_11685262	Not Available	670	Open in IMG/M
Ga0115363_11693446	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	505	Open in IMG/M
Ga0115363_11698784	Not Available	533	Open in IMG/M
Ga0115363_11700085	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
Ga0115363_11705213	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	649	Open in IMG/M
Ga0115363_11705918	Not Available	590	Open in IMG/M
Ga0115363_11710631	Not Available	765	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0115363_10001657	Ga0115363_100016571	F008424	MEKKINILERLLYLTLIAGICFFTGVFYTYYKIDQRLWNEEILKARDIETRYMNYPTKRNYKKDDLERIIYGTN*
Ga0115363_10002703	Ga0115363_100027032	F077318	MIAEVIKILRESDFYGAGEYTEIAKGXREMVTSWKGIKRKVKRQYKSR*
Ga0115363_10005070	Ga0115363_100050703	F026898	MYLDWGLEILDPSGESVYXNPHCIASDXVGFYNEDXDGNELEEGIPWSDNDWSXYLAFEADFXIEAFVHEGT*
Ga0115363_10005430	Ga0115363_100054301	F001740	MYNPNNPSNWSWSKAFDEMAKTVNQAELTQQSINHVLDYSGEANGVFMTLSKSQQDDVYEILNQIL*
Ga0115363_10005895	Ga0115363_100058952	F040581	LKKKINMEFLENGNFNGIKFMGNGNVYNGYLNQEQTWKEYRQWALENIY*
Ga0115363_10005895	Ga0115363_100058953	F003492	MAELLTDEIIIEKLNEDGIMQEPDGPWLLEYIYENYGGQLDTTSDFVDDKWTLKIYSEMTYDGYDIFWCTFEDRPYVSQDGYYYEDYSDWSTKALEELVNGSNVWVENHIWDSMEWDFNAEAEQWWQDVYEELFDEKKEELLDSGDYYIEKED*
Ga0115363_10007508	Ga0115363_100075083	F009959	VTEQEVIDKICDRVVTVLYNELDYYMFEELGYTETDDKYVEDADKLLVKIIKELTQF*
Ga0115363_10008043	Ga0115363_100080433	F046978	MAKTKKVTVSMTEETKHKALDLSVLILGTENISGYISYLINKAHLEAKN*
Ga0115363_10008379	Ga0115363_100083792	F041287	MEVCHKCARPADYICPVCGTKSCRSHMELRYSGQYRGLKSRYMCPKCWKTKQVMLNQNMINARRYRPKKYVFYKVPIIGK*
Ga0115363_10008529	Ga0115363_100085292	F005351	MYNPNNPSNWTWSKAFDEMAKTVHKAEMTQQVINHLHGYKAEGKYLDLSKKQQDQVYEILAQIL*
Ga0115363_10008529	Ga0115363_100085293	F009959	MTEQEVIEKICDRLVTVLYNELDYYMFEELGYTETDDKYVEDADKLITKVINELIK*
Ga0115363_10009454	Ga0115363_100094544	F016667	MKINKNLRRVVVTLVLIGAGFVYGKQTGEQEILNRWENRWFESDWYDTRSIEDFLYDTDYSIQLGE*
Ga0115363_10009667	Ga0115363_100096672	F059466	MWKNVKNELPHNTYECIVKMWNKFSDTWETGIGIYDIPTKQWEIQDNGVVVNYPVRFWFQTPELV*
Ga0115363_10012470	Ga0115363_100124701	F018527	NDKAFEKTKEKLEKLLSVKTTTPEEHREGLYEQIEKVVDHLSLLHRRGGFYEYKKTNNNKQKH*
Ga0115363_10014050	Ga0115363_100140501	F056621	LNNKERFALAERIQKRVQEKHPHFRLIKRRDEIEKELKEKNENRGS*
Ga0115363_10015617	Ga0115363_100156173	F056035	MSLLYKPKEEQTVSVEFEFVEDGKIQIDFTSNCGKFGTDEMIDGYVLTPERLLQILQDRDDYTDDEL*
Ga0115363_10018493	Ga0115363_100184931	F036784	MAIIYTYPTVIPEASDILLGTEQNATLRKPTKNFKISDIAKYIID
Ga0115363_10018659	Ga0115363_100186592	F009067	MKDKSKQVWYLYAHDIKELKRQCYDVISTLYFQLGQAPEAEIIVQMTNLFCNDLATNYGSMELEEVRFALNKHIRENDGPHFVNVPMWNEALRSYKMSKALKRQTNQIDQYELYKKRVESFSKAIDKREIKKIGNANNNK*
Ga0115363_10019220	Ga0115363_100192202	F092078	MAHVQEALLASAEAQQRMGKPFDLFRPIRETPLSVFFDTASPNGFEEGRLNPNLPTIWKHRYNMRIGDEARGNMRIGGXDLKETVSVPNTLSALKIADEILEGAEPWSDWKQYARLIDMDAPKVNVPLTKYTDTVGGDPTQQKGLEIYTEAGGVPPPIGGKVTTVE
Ga0115363_10019422	Ga0115363_100194222	F090258	MKKFNKMESNLICDALDYYVAHLEADIKAIEESGRTSIFAPGFYPMIKDELVNKIKKDMTKKQTF*
Ga0115363_10019582	Ga0115363_100195822	F058199	MGMGYPVPCSFTFSFEVFIMFKLTLITVEACHDGYYNDTTIAFGKSPKACWAKMRGRNHGQRINRGGHPLGYGGTPVI
Ga0115363_10022320	Ga0115363_100223201	F074900	MAAKIVNMANPDEDETLCATAEEAEQALAAMVEKFKSQGYRVDKRRFPNEDYPQYTVYDRNDAWIGSYTIFLQ*
Ga0115363_10024995	Ga0115363_100249951	F002344	MLYDKLKPHIKAKMKENAQEYPSVNWLIDKIKTKDYYSDLTIDELRSICTFGDVWYHDLTQKELIW
Ga0115363_10024995	Ga0115363_100249952	F008944	MNKFNGMESKLIVDALDYYVTQVEKDILELEKDGKRSIFAPGFYTNISNELKDKVKSMTKKQITN*
Ga0115363_10033165	Ga0115363_100331652	F040581	MEFLENGNFNGIKFIGNGNVYNGYLNQEQTWKEYRQWALENIY*
Ga0115363_10037899	Ga0115363_100378991	F022979	DTFFLRTVLTSSTTDYVSDNIDISAYTDPARGRVLVVDKAFITFETDNGGGVLQTDIDGAIGHRTMTAQACSEKQTALVSLNDNSVXCKETIYASNTVNDAGGVGTMGLINFTSALNPANFMGGFIIPTDAIHCGIDTQIGWTAELKVGFMFEVHTEKLSLQRIQELLVSLTAN*
Ga0115363_10041268	Ga0115363_100412681	F078600	NPNNPSNWSWQKAFDEMEKTVNISELTQQIINHLADYPGESYGEYVKLSKKKQDDLYEILGEIL*
Ga0115363_10042767	Ga0115363_100427671	F015413	LLAAPKFEQSPEFEQLLPKGILGKDMLIGSAGTALSVQMGNIVGKFLPIGGLPSGTSSILAGILLQKFMGSNSNIKKLSEGIIQGGIATAMTPFTSGLIPQQFSQEKKVEHTEELNPIVEGVMW*
Ga0115363_10043045	Ga0115363_100430451	F023598	PILDPQFGDKVLGSNTVDSAGNPVEGNPTVQYTLSSVKTLVDQNFIQQLETENTSSVALLQSGDALIFGGVDVTGNNVTYTANTGKVTFVTKGTYYIEQQYCVSGTPPGQIFPVFKTMANGSDQVGPTIIERYSPGASTDRKIISISNIVNVLGGTYYIFHGLWDSQGAQPTLQPQLINNNWATAVPSAYLKISKLI*
Ga0115363_10045280	Ga0115363_100452802	F012984	VLRVVVMDQSTYEPLSELQKEQYLRELGLEPVLSYYNNEIKKHNCVCFKSLELIEKRNRCFKIMREEYQELC*
Ga0115363_10048851	Ga0115363_100488512	F054974	MTNFQLIISRFAFGIVLVGIAVLMSLFAKEDYSPAGAIGIGMLGLLRIAILR*
Ga0115363_10048922	Ga0115363_100489222	F084258	MDSEIVLKNKIQKAQRADELLNDPLIQEFIISLRGDLLNKFESTSLEDEKERLAAWNQSQVLNQFLDKFTKLIKEG
Ga0115363_10051742	Ga0115363_100517422	F039177	MKLIVLLLLASEPLYFPFDSTLSCGEQGEEIMESIATYQGPGTNQGWYTDHGALIYGFYCE*
Ga0115363_10051949	Ga0115363_100519491	F017160	MDYNYTIKNGRLINNAPPLESGISQAARLKKQMKRAEKVRMIAEGNELANANINLFKKL*
Ga0115363_10053183	Ga0115363_100531831	F005454	IKHFNPHFPNRETYKCTIRHTTKFGTLDEITAWRDDQLKNEDYYKSLEESNTKAAGEFYKTLNYKGD*
Ga0115363_10054457	Ga0115363_100544572	F040581	MSYXXQXXXTKTKINMEFLENENFNGIKFMGNGNVYNGYLNQEQTWKEYRQWALENIYE*
Ga0115363_10054519	Ga0115363_100545192	F052600	MRITNYKSNQTLVETPEYTAHLSYGVPQVVVFHRGSALENTVIHNNVKYSTTTSKHKNAYLRTLCTDSYTFIPASPAEIQEVTGLETPQSV*
Ga0115363_10055363	Ga0115363_100553632	F060833	MRDTNAEIEPSLTEFIVTESYYIKARTREEAYQMVADNDFKYDGIRKHNVNIEVNF*
Ga0115363_10056994	Ga0115363_100569943	F016667	MKINKNLRRVLVTVALVSTSFYFGTRNGEQNILDRWENRWFESDWYDTRSIEDFLYDTDYIIELGE*
Ga0115363_10057252	Ga0115363_100572522	F009424	MVLGGHMSKDTASGKIPANGLSSKEDVSKETLASLALASHGPNQMPMGVVHKKISTDRGKFSFD*
Ga0115363_10057252	Ga0115363_100572523	F013647	MSRSINEVTAYVFGKPKPTSPKEAYGHSNAAGRGYYTMKEMSDERTDEFMRSQKRSNNMVNVEGDMVGSWNLEF*
Ga0115363_10068803	Ga0115363_100688033	F000352	MRTIKLTENDCIFVHYVLRMYAQQTPGLDQEDKDEIMEVAVKFK*
Ga0115363_10071068	Ga0115363_100710682	F069692	LRXTVDGKEVREFEDKTEVYPLRENISTWLRSVGIFKTSEDIAEAVSVAKQIRDCTADSIELDEREVGVLKQAVNRLVEFTAEGKANPGLGGEVHEEAIVRIVKMEEVK*
Ga0115363_10076966	Ga0115363_100769661	F045770	MANLSRDNSLRFEGEAVTEEWVLDSSAAQTIYRGQPMILDISEDTIYVRGFVDATVVAADDIFIGIAMSGATVATTDTDTDATKQKRIKIAIEPSIVGIPGTTFTDADVGDTMYMSDSSTLSGTAADNPMLGKLKRVHSGYQFVRLVS
Ga0115363_10077859	Ga0115363_100778591	F080156	MNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSI
Ga0115363_10079028	Ga0115363_100790282	F016667	MKINKNLKTALITLAVIGTSYSLGKQQGEQTIIDRWENRWFESDWYDTQSIEDILLDTDYSIELGN*
Ga0115363_10088262	Ga0115363_100882621	F077934	SKWGWYNVLYSLANNILDIEKITRIPILETLTYLAFTQDHNNKQRNNYDNI*
Ga0115363_10093698	Ga0115363_100936981	F078263	MELLHDSSGLVGSLDCQLKRLEEKIDTNRPVELMKDLRRLDDEIRHFKDVEITTNTVVSSVKELGETIKELEERTRNKFTVMTSQIKATEAMVADKHKDLISKINDISSRIDNLEKKIDI
Ga0115363_10175884	Ga0115363_101758842	F082876	MKLPAYGVFLITSKVLDARRRGATTEAYGSXRRXEERSKATPQMXP*
Ga0115363_10221323	Ga0115363_102213231	F077318	MRAEITNIIDVLKSADFYGAGECVEIAKGKYEYVSSWVDFKRKIKRLWLSSKK*
Ga0115363_10237096	Ga0115363_102370963	F015742	MDSKKAYEQMQDEMIDRESAYLCTEVERALNRIIDYTDMLDDRSFTKIKASAIKLLQEWHL*
Ga0115363_10316468	Ga0115363_103164681	F093218	SCKYLGASLAIVLVKRKLGRRPNDWTLWLTLGRLYGVGYQWPQAIDALKKARKLDPHNEIIAQQLSQTKEATKQDSPTKR*
Ga0115363_10323285	Ga0115363_103232853	F015742	MNTKKAYELEKEEIVDRESAYLCTELERALDRIITWTDPLDETMFRDIKESAIKLLKEWHL*
Ga0115363_10408291	Ga0115363_104082911	F001487	MKQFRIDVSHASPGQLQTIAAELKXMSHGWTRFGP
Ga0115363_10408291	Ga0115363_104082912	F001135	HSSAMVKRTNGQSGQSIDLPCFAACVYDYTMYKTMEMEQLDKATKQQPGFSDNQDGWQIVRNGLNFFRQYFAKEYMVLLD*
Ga0115363_10432526	Ga0115363_104325263	F000161	MKQFKIDVSHASPGQLLTIAAELKIMSNNWERFGPKIFINGQKLQAPSLHEPSRKRQASSNKRHNMARFI*
Ga0115363_10448168	Ga0115363_104481681	F103292	QLPYGRFVAVVSEDGDGFSAEIEGEFLVSPRTGVFRIRDRIITDQHYGPELVHAHSLEALRRAVDEKIENHIGPVNKWTADPG*
Ga0115363_10448436	Ga0115363_104484362	F084100	MEVYKNWQIRKSDYAVGYYEATNLNDCDAFMKHAKSIEQIKIEIDEEE*
Ga0115363_10448572	Ga0115363_104485722	F074900	LAAKIINLANPGEDETLCATVEEAEQTLAAMVERFKSQGYRVNEQHSPDEDYPQYAVYDRDDAWVGTYTIEPQ*
Ga0115363_10462065	Ga0115363_104620651	F009067	MKDKSKQVWYLYAHDIKELKKQCYDVISTLYVQLGQAPEAEIIVQMTNXFCNDLATNYGSMELEEVRFALNQHIRENDGPHFVNVPMWNEALRSYKMSKALKRQTNQIDQYQLYKKRVESFS
Ga0115363_10462065	Ga0115363_104620652	F050306	IDYLDIKERKDVTVKKMFEIYKTDNKYRNRITWDAHYLITGWKHIQQTKDERQK*
Ga0115363_10462743	Ga0115363_104627434	F003492	MAELLTDEIIKEKLEMDGFMEEPDGPWLLEYITTEYGGKLDNTSDYVDDKYTLKIYSESTSDCYDIYWCTHEDRPYISQDGYYYEDYSDWSDRAVDELTSGGDVWIENHIWCDMEYDFNHRLEEWWQDVYEEL
Ga0115363_10465437	Ga0115363_104654372	F091889	MRERAIKTILDLTDKYSRQELESIKDTLELVALSYDVKKILS*
Ga0115363_10466320	Ga0115363_104663201	F092715	MKTNKDFDKLLKVFFKVGWKNITHQQILSLAYKEIDRLLPLDDYWESDEHYKISNLIYDWCLGNRVITQDWLDSTLKHLDDERLMELLPIL*
Ga0115363_10476146	Ga0115363_104761462	F096221	MKKKLKYICPECRAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKDLSEKTKSLKEDEIWTTYYN*
Ga0115363_10483186	Ga0115363_104831861	F015742	MDSKKKYEMMKEDIIDRESAYLCTELERALDRIVSYTDPLDDAMFNKIKASAIKLLKEWHL*
Ga0115363_10485064	Ga0115363_104850641	F008795	LAFETSKKRFIGNLKMGKAFSYGYEKGMKGELYDSFLGCLGEIAYAKASNTFFNGSYSDNLERYTDSDFQDNIEVRTQDIKKDRSNFLLIRPGEKHGKYYYSRPCRKAA*
Ga0115363_11479737	Ga0115363_114797371	F078608	MPSKNKIMQIKKVAVNITERDITSMIETICKETQSTKKSNDIADLFTELLLKSTEASTLFVQIMLGNGLPEALRDGDVIRCKWDRLKVGLTNADEILEQLHENNLINGDDEVVCMIKSFRGYTEYF
Ga0115363_11669178	Ga0115363_116691781	F103884	CNAVIYDTITGDDCPLVEDFEPPVNDDYLYIGGYVEDKVIALMVYHKYLDGNKCHVQVLPEYRKEYAKTFGEQVLLFKGTLPLYAEIPDLYKNVLNFALMNGFNVINVKENDYMKNGETYNVNVLEYT*
Ga0115363_11682042	Ga0115363_116820424	F092715	MKTNKDFDKLLKVFFKVGWKNITHQQILSLAYKEIDRLLPLDDYWESDEHYKISNLIYDWCLGNRVITQDWLDSTLKHLDDERLMELLPILFKNYRRHITSSVTEELMNT*
Ga0115363_11682263	Ga0115363_116822633	F000352	MATRNIKLTEGDCTFVHYVLRMYAMGTPGLDSNDKEEIYEVAAKFK*
Ga0115363_11685262	Ga0115363_116852621	F005351	MSYNPNNPSNWSWSKAFDEMNKTVHQAEMTQQIINHLHNYDGGEKEFKQLDKENQEEMYN
Ga0115363_11693446	Ga0115363_116934462	F010686	LDSCGQATKGAWGMSWRQEALKGVEDCEKPGGVVKRALIPGFLNWRALNP*
Ga0115363_11698784	Ga0115363_116987841	F099322	PLNRSVKMARRASKYGDGSVRMVLDGVSLIRYSDGAWCRVAPPSAHDLKDNWYRSSPSLLIRWLDAVGKVTE*
Ga0115363_11700085	Ga0115363_117000852	F024951	MRKVTVKLEMRLVMMVDEGVEISDVVNELDYKVEDTTTAADILDIEITGYEVIDSK*
Ga0115363_11705213	Ga0115363_117052131	F015742	MLDNMDSKKKYEMMKEDIIDRESAYLCTELERALDRIVSYTDPLDDAMFNKIKASAIKLLKEWHL*
Ga0115363_11705918	Ga0115363_117059181	F060828	PMDNYNMNKFNGHEAYIISAAVDSYVTKMNESIKQAESEGKRPIFTVDYFPQLAKDIKAKLNLNTIKDYGDME*
Ga0115363_11710631	Ga0115363_117106312	F058199	MFKLTLITVECCVDGYHNDTEITFGKSPKECWAKMRGPNHGQRINRGGCPLGYGGTPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008417: Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12T

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences