 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300021331 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0114516 | Gp0225731 | Ga0210347 |
| Sample Name | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.456 (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 201436191 |
| Sequencing Scaffolds | 61 |
| Novel Protein Genes | 64 |
| Associated Families | 62 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Eukaryota | 8 |
| Not Available | 24 |
| All Organisms → cellular organisms → Bacteria | 2 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 8 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa | 1 |
| All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 3 |
| All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum → Desulforapulum autotrophicum | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris | 2 |
| All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp. | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine → Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | estuarine biome → estuary → sediment |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | USA: Washington | |||||||
| Coordinates | Lat. (o) | 46.286 | Long. (o) | -124.052 | Alt. (m) | N/A | Depth (m) | 0 | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000331 | Metagenome / Metatranscriptome | 1285 | Y |
| F000344 | Metagenome / Metatranscriptome | 1257 | Y |
| F002401 | Metagenome / Metatranscriptome | 563 | Y |
| F004285 | Metagenome / Metatranscriptome | 445 | Y |
| F005564 | Metagenome / Metatranscriptome | 396 | Y |
| F006063 | Metagenome / Metatranscriptome | 382 | Y |
| F007038 | Metagenome / Metatranscriptome | 359 | Y |
| F007352 | Metagenome / Metatranscriptome | 352 | Y |
| F012917 | Metagenome / Metatranscriptome | 276 | Y |
| F016165 | Metagenome / Metatranscriptome | 249 | Y |
| F016540 | Metagenome / Metatranscriptome | 246 | Y |
| F017093 | Metagenome / Metatranscriptome | 242 | Y |
| F018541 | Metagenome / Metatranscriptome | 234 | Y |
| F018950 | Metagenome / Metatranscriptome | 232 | Y |
| F021303 | Metagenome / Metatranscriptome | 219 | Y |
| F023254 | Metagenome / Metatranscriptome | 210 | Y |
| F023896 | Metagenome / Metatranscriptome | 208 | Y |
| F024000 | Metagenome / Metatranscriptome | 208 | Y |
| F024006 | Metagenome / Metatranscriptome | 207 | Y |
| F025483 | Metagenome / Metatranscriptome | 201 | Y |
| F026568 | Metagenome / Metatranscriptome | 197 | Y |
| F027700 | Metagenome / Metatranscriptome | 193 | Y |
| F032659 | Metagenome / Metatranscriptome | 179 | Y |
| F033314 | Metagenome / Metatranscriptome | 177 | Y |
| F036506 | Metagenome / Metatranscriptome | 169 | Y |
| F038546 | Metagenome / Metatranscriptome | 165 | Y |
| F039486 | Metagenome / Metatranscriptome | 163 | Y |
| F042089 | Metagenome / Metatranscriptome | 159 | Y |
| F042669 | Metagenome / Metatranscriptome | 157 | Y |
| F043477 | Metagenome / Metatranscriptome | 156 | Y |
| F047091 | Metagenome / Metatranscriptome | 150 | Y |
| F047495 | Metagenome / Metatranscriptome | 149 | Y |
| F048318 | Metagenome / Metatranscriptome | 148 | Y |
| F052605 | Metagenome / Metatranscriptome | 142 | Y |
| F054544 | Metagenome / Metatranscriptome | 139 | Y |
| F057770 | Metagenome / Metatranscriptome | 136 | Y |
| F062310 | Metagenome / Metatranscriptome | 130 | Y |
| F064269 | Metagenome / Metatranscriptome | 128 | Y |
| F064726 | Metagenome / Metatranscriptome | 128 | Y |
| F068326 | Metagenome / Metatranscriptome | 124 | Y |
| F068850 | Metagenome / Metatranscriptome | 124 | Y |
| F070130 | Metagenome / Metatranscriptome | 123 | Y |
| F071970 | Metagenome / Metatranscriptome | 121 | N |
| F073124 | Metagenome / Metatranscriptome | 120 | Y |
| F074319 | Metagenome / Metatranscriptome | 119 | Y |
| F074406 | Metagenome / Metatranscriptome | 119 | Y |
| F075045 | Metagenome / Metatranscriptome | 119 | Y |
| F075701 | Metagenome / Metatranscriptome | 118 | Y |
| F076350 | Metagenome / Metatranscriptome | 118 | Y |
| F076808 | Metagenome / Metatranscriptome | 117 | Y |
| F078243 | Metagenome / Metatranscriptome | 116 | N |
| F080062 | Metagenome / Metatranscriptome | 115 | Y |
| F087396 | Metagenome / Metatranscriptome | 110 | Y |
| F089622 | Metagenome / Metatranscriptome | 108 | Y |
| F092303 | Metagenome / Metatranscriptome | 107 | Y |
| F094641 | Metagenome / Metatranscriptome | 105 | Y |
| F094642 | Metagenome / Metatranscriptome | 105 | Y |
| F097365 | Metagenome / Metatranscriptome | 104 | Y |
| F098390 | Metagenome / Metatranscriptome | 103 | Y |
| F100201 | Metagenome / Metatranscriptome | 102 | Y |
| F103344 | Metagenome / Metatranscriptome | 101 | Y |
| F104762 | Metagenome / Metatranscriptome | 100 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0210347_1004997 | All Organisms → cellular organisms → Eukaryota | 850 | Open in IMG/M |
| Ga0210347_1015314 | Not Available | 966 | Open in IMG/M |
| Ga0210347_1016023 | All Organisms → cellular organisms → Eukaryota | 1094 | Open in IMG/M |
| Ga0210347_1020110 | Not Available | 547 | Open in IMG/M |
| Ga0210347_1026264 | Not Available | 520 | Open in IMG/M |
| Ga0210347_1028079 | All Organisms → cellular organisms → Bacteria | 1190 | Open in IMG/M |
| Ga0210347_1038852 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 691 | Open in IMG/M |
| Ga0210347_1043642 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 689 | Open in IMG/M |
| Ga0210347_1045641 | All Organisms → cellular organisms → Eukaryota | 506 | Open in IMG/M |
| Ga0210347_1054208 | All Organisms → cellular organisms → Eukaryota | 531 | Open in IMG/M |
| Ga0210347_1057373 | All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium | 716 | Open in IMG/M |
| Ga0210347_1057676 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa | 687 | Open in IMG/M |
| Ga0210347_1077460 | Not Available | 639 | Open in IMG/M |
| Ga0210347_1084265 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila | 791 | Open in IMG/M |
| Ga0210347_1100888 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica | 745 | Open in IMG/M |
| Ga0210347_1103507 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 576 | Open in IMG/M |
| Ga0210347_1115571 | Not Available | 688 | Open in IMG/M |
| Ga0210347_1125558 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 2135 | Open in IMG/M |
| Ga0210347_1133537 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium | 541 | Open in IMG/M |
| Ga0210347_1134964 | Not Available | 531 | Open in IMG/M |
| Ga0210347_1138185 | Not Available | 533 | Open in IMG/M |
| Ga0210347_1144055 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 728 | Open in IMG/M |
| Ga0210347_1153901 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 705 | Open in IMG/M |
| Ga0210347_1154223 | All Organisms → cellular organisms → Eukaryota | 562 | Open in IMG/M |
| Ga0210347_1158586 | Not Available | 549 | Open in IMG/M |
| Ga0210347_1162532 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium | 526 | Open in IMG/M |
| Ga0210347_1168749 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum → Desulforapulum autotrophicum | 1316 | Open in IMG/M |
| Ga0210347_1176595 | Not Available | 711 | Open in IMG/M |
| Ga0210347_1187866 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 583 | Open in IMG/M |
| Ga0210347_1193126 | Not Available | 605 | Open in IMG/M |
| Ga0210347_1193822 | Not Available | 878 | Open in IMG/M |
| Ga0210347_1203582 | Not Available | 534 | Open in IMG/M |
| Ga0210347_1205973 | Not Available | 823 | Open in IMG/M |
| Ga0210347_1213434 | All Organisms → cellular organisms → Bacteria | 898 | Open in IMG/M |
| Ga0210347_1219509 | Not Available | 774 | Open in IMG/M |
| Ga0210347_1228054 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana | 546 | Open in IMG/M |
| Ga0210347_1233562 | Not Available | 1088 | Open in IMG/M |
| Ga0210347_1237970 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris | 506 | Open in IMG/M |
| Ga0210347_1264157 | Not Available | 1036 | Open in IMG/M |
| Ga0210347_1271813 | Not Available | 593 | Open in IMG/M |
| Ga0210347_1274957 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp. | 551 | Open in IMG/M |
| Ga0210347_1282593 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 549 | Open in IMG/M |
| Ga0210347_1293040 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 596 | Open in IMG/M |
| Ga0210347_1308243 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris | 630 | Open in IMG/M |
| Ga0210347_1313434 | Not Available | 620 | Open in IMG/M |
| Ga0210347_1321860 | Not Available | 583 | Open in IMG/M |
| Ga0210347_1324931 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 1630 | Open in IMG/M |
| Ga0210347_1326444 | Not Available | 566 | Open in IMG/M |
| Ga0210347_1340949 | All Organisms → cellular organisms → Eukaryota | 608 | Open in IMG/M |
| Ga0210347_1342355 | All Organisms → cellular organisms → Eukaryota | 500 | Open in IMG/M |
| Ga0210347_1344588 | Not Available | 806 | Open in IMG/M |
| Ga0210347_1348930 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum | 563 | Open in IMG/M |
| Ga0210347_1359717 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 859 | Open in IMG/M |
| Ga0210347_1364609 | All Organisms → cellular organisms → Eukaryota | 530 | Open in IMG/M |
| Ga0210347_1370692 | Not Available | 614 | Open in IMG/M |
| Ga0210347_1370929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 902 | Open in IMG/M |
| Ga0210347_1372290 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 760 | Open in IMG/M |
| Ga0210347_1385871 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium | 700 | Open in IMG/M |
| Ga0210347_1386521 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium | 644 | Open in IMG/M |
| Ga0210347_1394769 | Not Available | 516 | Open in IMG/M |
| Ga0210347_1415721 | Not Available | 809 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0210347_1004997 | Ga0210347_10049971 | F073124 | KMNTYIGTKFGDEAAQEWISGKKIVPTEPTYSLAIKARHAARVKATKDRIDLRLKGLTTEKAAIQAELLASPSDRTLLRELREVEDQMAKAEIELIDEVDMKLTEDEKISHANAWRSHRETTESLKKSRGKVYSLLFGQCTQVLVDKMKQDTDWVTISESFDPTLLFKLIEKFVLKQSDNQYATAVLIAEQLSILSFRQDDHLGNAGYYDRFTMRVEVARQAGVCYYSPALLEDKATQLKLGDYDTLAGDVKKSVVDQVEQEYLAYLFLNNSNAKLHSQLKKD |
| Ga0210347_1015314 | Ga0210347_10153141 | F024000 | FIRMLERKKITEDMLKLTKAVASLKAPVRRLTTAPTGEKPAEKTARLELLKAAVDKLIEANIHEEAKLETVYELFRKTLKEDPELQWDRIVTAMHTKDPWEDLKGAKHDGTRGKSSKSLWECIDFHKRTLYSIDAAEQQRLYILCHLKKPAKSSIRAHVTRMETLNKYLEQLPTIKNSPMAVASTEYGNVPFNESTLASIILSHLPVAWRNQYNLTHQIVPESPRAILLDLENLEKVFAERSNEAARANKAKVAAAAKAGDHVPRKGKREHGGGPSKGTPKKGRTDKFCKWCKAVDGLFTTHITDECRRFNKDGSQKD |
| Ga0210347_1016023 | Ga0210347_10160231 | F062310 | MSGLRKKLNSLDTELGLMEMVLAGIKSALTRQPFSVSQDLRNLAAAQEAIGWTNLFKGRISKQWIERQRHHIGDKATTKNNALNWATTVIDYFFTQWFKVWDQRNLDRHGNDCQGRANKLKDVAFREMTHLYTFEEAVPDDIRWLFQTPLEECLHWPLFRQRAWITNWEHIIKKEYATQMETG |
| Ga0210347_1020110 | Ga0210347_10201101 | F042089 | MSTDKLKLLLAELEVEVVQEALELYVQTRPVPNDRRFEYRYRAARSVLESLRQGTRELGTVPQGDDEEAALIRDERAERRPLRDRVED |
| Ga0210347_1026011 | Ga0210347_10260111 | F078243 | VVDYTNFDGHTYRFSSTSKKENESKYLCNKYKLAGETALWGTRRQSMNAGGTTPGEKCPGSLIVKHEFGMSGGDHPYIKVEHKCVDNREVTSAVARGVKDYRPQLERISPNIENGNFLSRNVIEEVLREFKNAEKNDKNLWQNITGGNTVRKWIPDMYDNNVKRVALKVIVETALKGYITIVQGRYPTLKYFKVGALKSLPGAKSQYVGHGGRLHSDYPQSVEELEPRFRPVSIIV |
| Ga0210347_1026264 | Ga0210347_10262641 | F057770 | GKHYNGYKLECNDDKKNFRFSLNHKMRKSGSVLIRGTTRGGLCYTRPAVPPMPTTEGTAEMSLDMADRAAISMVEDHPKNSYRHEMKLHALSAKAERLLWHQQLAHCGDEQLCQAHMFSDGIPEITRGKDSALDSCPVCLLVAANMKSRNRGDGETRTATEPGQGLSLDFSFA |
| Ga0210347_1028079 | Ga0210347_10280792 | F016165 | MLLKILSGVLGVAGLCWLALLFSSRAILVSERVEAAALHQQLVCTYFTGSGTMRKEYWYSKSDRFGRAACPRWESVREPE |
| Ga0210347_1038852 | Ga0210347_10388522 | F026568 | MHKPSPYKEINDPFYHYTRGVLYFDEEHFTFTAYRVPYQELDNKTWESERAFDRDYRRMVARKYSITETLTH |
| Ga0210347_1043642 | Ga0210347_10436422 | F021303 | VSCIFRGMTERPISTDVAGFRANVLNHSSEFVELVYRDAPTEYRRMMTLERFRRELGQQTRFNHGKLYAYAEFVVFRREFRERFPDASPAACVNAFSSLFLKNDISITNLVDFVEGPDHRGQLQLNQPPRPE |
| Ga0210347_1045641 | Ga0210347_10456411 | F027700 | LKHKLRKSQNLSLIGTVVGGLLYTKSALPPMPLSDSTKEMSLEQADKAGISMIEDHPLNSPSHELKLHQLSARQERLLWHQRLGHCGDEQLSKAHEYCDGVPKISSKAKSVVDECHVCIAANMKARERGDGITRTATISGQGLSIDFSFAGQHSKNALNPERMRINDY |
| Ga0210347_1054208 | Ga0210347_10542081 | F039486 | QVASLPTNPMLNLAAASEHVGLIERNIRFLKEKTRSVRHSLPFERIPAIMLIRMVLHTVQFMNSFPRKGGLKHYPPSAIMNGTRLHMNQLQLKFGSYCQVAEDVTPRNSLAARTRGAISLGPSGNLSGGQRFLTLDTGKLVVRNRWKELPMTSDVIDRVNLLGRSERSLLVFTDRLG |
| Ga0210347_1057373 | Ga0210347_10573731 | F018541 | MRSFWVDFPVTDEQYAKLDLRWRRRDNFYEIKNPPPADIRIRSLCTFGGEDYRIISLEARGDIDDYHHAVKV |
| Ga0210347_1057676 | Ga0210347_10576761 | F033314 | MSAGTVDFVVGVDKKLWIGSGLFKNCKSFFGAQGAVFGSECFDHTDWIALPEDAAGYSTALISWGWIGVIELGCKMFSVGVRLLAFVD |
| Ga0210347_1077460 | Ga0210347_10774601 | F071970 | MISECVSCVPRVFLHASVVYVAHGIEILDVLNIKFVWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM |
| Ga0210347_1084265 | Ga0210347_10842651 | F000344 | MRPIHPHAAESGVGKHTARESESAKACAIGKERVANAHSHKL |
| Ga0210347_1100888 | Ga0210347_11008881 | F094641 | RTPRTYRGIEIVPDTLPEANIAGVDGGRPRRDLKPMPKPFVSTDYLMTESMPDKDMLNKRHRGRMTRAPARMKFGGATWDELEQCHNMFKAPLSETVDQEYNLMQALYIAKVIMEIRNGVSEHGVSFSQNYIYQKGVKKFGERGRKAASKELDQLHQRNCYTPIDVSAMTPEEKAQAMEALMFLQEKKDGTVKGRMVYNGKPTQEWLSREDSANPTAALESTFLTSIIDAKEERDVMSADVPNAFIQ |
| Ga0210347_1103507 | Ga0210347_11035072 | F080062 | VQLTLPRILWFVAALAIAWGLNAWRREAASHGLKAAQRGDRSAAESWVDRALREGECELHEARGYLQSPVTRQYVRRPDYVESFVEKLYAGGAPKLEICDSDLVGFRFAHYLLVTLPEDP |
| Ga0210347_1115571 | Ga0210347_11155711 | F032659 | KADPELSESKHEEEHFRENALPTGKIEPEVTQGRADVGETPTAQTLGTLARHVLSSSRHAGSRELARAVLQLLARWKKQS |
| Ga0210347_1125558 | Ga0210347_11255582 | F000331 | LHFEHLCDSYGIKRKPTTVRNPQANAILERVHQVIGQMLRTAEIDMAKSVVPDDVDVFIDNAAWAIRSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGDYRQSQTDRSAERENSKRIDYDYKLGDKVLIVKDGILRKAESRYGKEPWTITTVHTNGTIRVQCGSKSERINIRRVTPFSEDNI |
| Ga0210347_1133537 | Ga0210347_11335372 | F076808 | MLLASPENFSENGARPVQILGRHGRLIGWARSFSDFMTVTDNTIVGDRPQGRLTRIAGRDVSGPDGHTVGKTFSRKELLECPWKPSPARSAESASNHIPAPSQDRPQSVDPAGPLMHKSSYPQNGARETG |
| Ga0210347_1134964 | Ga0210347_11349641 | F047495 | MAEACYTARATTKQQVLDGIEKLTLHTNEHGQYTHDVILLLQKGIQRVLVSQFNPSDPGKGMVKLLDDGDNILTRIQSTDAITAGSVLKSAKKRADDLSTTTGKTILPTFTTRTEAQEEADRLNVINQSVIGAKEGVVEAVSKLVGSDITDAILRTA |
| Ga0210347_1138185 | Ga0210347_11381851 | F094642 | VAPLAARFVMIVGREDGTFTIEASHLGGADLVDSREEVEATELLSLRNLLGAEAGESSERLEAGEGVRLLRGNMDVAISLSV |
| Ga0210347_1144055 | Ga0210347_11440551 | F092303 | RSVLVGRAFTSGNTLAVAELAAIALLLPVLVLMSRIEDRGRSALIAAALGTWLVAVALAPVLAESHRAVAELPEVGEYLRRNAPPASQLAGKAFSYVALAWLLAGTGLLPHVAAGVTVLFVLLLGLLHVGAVAPAYGWIDLVIAMIAGFMITRWMPRGAGR |
| Ga0210347_1153901 | Ga0210347_11539012 | F025483 | MRTSEIDMANSVEPADSDTSIDNTAHKVLKASSGAAIFERDMLFDI |
| Ga0210347_1154223 | Ga0210347_11542231 | F038546 | AEKKCRKILRPDSDYSPTVQMWYDRIHAYLQLIRLREGKAKNVGNVIRFAVRTSIQSPDKLTMEELKDGLRYCRIRKAELRNQAKGLRKVHLRDCLIDAQTKKQNDRVRDIKQTINREESKRMWYLIKRTVKDPHSPSVLKVQRVLDGETKEYSIQEDVENAIQRECEIRFSLAHSAPIMSTLLGDR |
| Ga0210347_1158586 | Ga0210347_11585861 | F024006 | DYLSGFMYVVERAINDLHQIIRKFFWHPSLGTGCITSSGFLLQPNIQERDFGRYAPYLEDLDPATVRMFYQDFCRVAHDHGIYVPAYEEYRPEATFSQIECGDTRTACVPKFCQSNVQRWATIIHHHLKRDKVVPSTHPHANEIKHNPNGYEALMLLVCPYHPGFTENGILIKPHPQQGRRSL |
| Ga0210347_1162532 | Ga0210347_11625321 | F007038 | TLMTRRIFLDTEWTAPPWSDRAELMWIGLADEQGRSWYGISSEVEIDPSTNDFISGVFRLITPDEPRLTNEEIAAAVIDFCGDVDEFWAWIPTMERFSEWFGLGEEAAELYAKHWDVDLQMVRSLVQPWPDGWPDRLLDLNTAAVEAGVEVPLRAVNHLHPRVHAEWNRELFELI |
| Ga0210347_1164978 | Ga0210347_11649782 | F104762 | VAVAVLTDKLAVIKGQPTSIHLAMTASVNHRDLMKDLKERDVTPVNDEQTPDLV |
| Ga0210347_1168749 | Ga0210347_11687491 | F087396 | DGFVLDEPTLINSRILPYVQMVASVLEGRTISREELLSALRKRMRQRSIGRAPRREYVLRYLNGHPP |
| Ga0210347_1176595 | Ga0210347_11765951 | F036506 | PIKCYYTPDIPNFILSPNSFKALLGKHYNGYKLECDDNKKTFRFSLNHKMRKSGSALLHGTTRGGLCHTRPAVPPMPTTEGTAEMSLDMADRAAILMVEDHPKNSYRHEMKLHALSAKAERLLWHQRLAHCGDEQLCRAHMFSDGVPEITRGKDSALDSCPVCLAANMRSRNRGDGETRTATEPGQGLSLDFSFAGQHSKNATDPKKMRINDYMGIHGETCYLLLYDHATERLDGV |
| Ga0210347_1187866 | Ga0210347_11878662 | F002401 | VSESGGAPRQTAIAYEGKTDALCRKHPEMGPCQYERNACRQGGGRVYAADGTEITWATEAEYDRKVRRVQFRSN |
| Ga0210347_1193126 | Ga0210347_11931261 | F074406 | GKPLHECVTYQMPTAKNIRSPAEPIGYAGLCRAMPAAEVSGFAGLCQALSQLDMPEALSVLDTSTGEFLEHRQLRRDPRYKATWDTSYANELGRLCQGIGSGTTPNSKRVAGTNTFFLIDYHDIPAHKRKEICHTMVVCEVCPEKDNPDRTHITIGGSRICFPGDVGTNTASLELFKVLLNSVLSRKGARFSTIDLKNFYL |
| Ga0210347_1193822 | Ga0210347_11938222 | F068850 | WVLNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLDSGELEGDIREEAEPLERDIFQYELELQRQGYSID |
| Ga0210347_1203582 | Ga0210347_12035821 | F100201 | IKPKIRERRQLLTRLLPAMTSESIKLRALGWAKYEIENRNRFQPHEMRAQVTQSVWELLFGAQGYNLDTTELRNVDVYYQRYKDHVKGYDMKVSPV |
| Ga0210347_1205973 | Ga0210347_12059731 | F018950 | GYRLEPTVDLHHRPHHNQARVVERARLSNVHRLMFSRRQVLLASAALLGTPWTAVAAVSRSFLQLRVEYTATSLIGADARAMPGRLWRTHSALRHEGKRQGRSLTVIARLDRNLCWLVMADPRFAIETDLSALDLPLDVLNGGGDMRQIREGRERANGLDTMRIRVERNVGSGSRFTGHVWATDQGVIARLAGEGESRGRRGRTLMNFRDVRIGPLEPGLFEAPRGVQLVRVEGGDLAALLEGLEAAGRIGQRR |
| Ga0210347_1213434 | Ga0210347_12134341 | F103344 | ESPSKLVSLLTTPTIMPFRQRGSMLGSILGIVVCGVGGGLAAWASVTALGVGGVLGAILAAVIGMVVATALWAGGTTLLRALGWVR |
| Ga0210347_1219509 | Ga0210347_12195091 | F004285 | MSLSWISNRSLRISPKVRLVEDGEVEALRRKLEGLEWRPENGFLKDQVIEKAPPASRAPRAA |
| Ga0210347_1228054 | Ga0210347_12280541 | F000331 | PQANAILERIHAVVMTMLRTAEIDMADSVKPSDIDVFLSDAAWAIRSTYHTVLKASPGAAIFGRDMLFDIPFIADWKKIGEHRQLLTDRNTARENEGRIDYDYQVGQKVLVRNDGILRKAESRYLREPWLITSVHTNGTIRVQCGNKSERMNIRKVKPFDDGTNI |
| Ga0210347_1233562 | Ga0210347_12335621 | F016540 | LTDIVEDDLGAVATIDSTMLFLGELEAHLTAAIHEQADELVHNACREMEALLLEQVSDRLRAQLPALVARIVDEHFHGPARTN |
| Ga0210347_1237970 | Ga0210347_12379701 | F074319 | FSESSISAEEMEMVVQAIQSQAITPAEQAIGRFTRRKLRSLSTWEQWRAGEHKQLDHFHDLKMYGEPVKRPPGAIVLRPHWQYSIKRDGTRRSRNCCDGSPRSAPLLHGIASTYSSCVEQPVQRLFFALAARENYRVYGGDAQDAYAHSPPPETPTFVSIDDAYADWY |
| Ga0210347_1264157 | Ga0210347_12641571 | F012917 | ILFKFLRFPLNDCGYYDKYSSIPEINRAWDKKKHLKRKRWSQE |
| Ga0210347_1271813 | Ga0210347_12718132 | F076350 | LMAQPLQKIIATRYTGRNLPVTLVLPDGGRVPLSSEPEIEIAAR |
| Ga0210347_1274957 | Ga0210347_12749572 | F006063 | LHLAVLLLDLKIRMMQAIDEEMFDLAMTYHLLILVRTDELQAHKWAMSPKAWAIYETIHP |
| Ga0210347_1282593 | Ga0210347_12825931 | F018541 | MYSPKMRSFWVDFPLTDEQYAKLDLRWRRRQNFYEVKNEPPQKVRISSFCTFGGEDYKILSLEARGDIDAYQEALKIMEQWIIDNLGPF |
| Ga0210347_1293040 | Ga0210347_12930401 | F048318 | MATVENVHLDITASTTKPDYSKITYSYELHPSEMDCAWQREYTVSADFWGEDLIDDDLLAWGKDEHRVKFDDSGSCEPIKMERVFEVETKILDEDLFGDDEVYLIVEARSGLGSDAAGEDPVIGRSNTVVGDF |
| Ga0210347_1308243 | Ga0210347_13082431 | F042669 | FKNTTHEKNIYTGKFCGEKVLLVRQVDDFALGCRQESTAKSVYADIGTKLTLHNEAEAPFEYLGLVDSFDGYDVLQTRDYIKLSAESYIRHLLKAHGWDNPSPRESSNKPKPPLHESDVANLFNLAAGPVENAPEHKALEAEQGFGYRSVLGEMLFAYVLCRPDVGYTVTTLAKFSTAPNALHYKSLKHLAICLRQTQDWGIMCWRSEP |
| Ga0210347_1313434 | Ga0210347_13134341 | F023254 | AICSTERATRRKYCGAYITAIDDEEIVTLNQAKEKLKELRNKNVDTFTMILAREPKPSKSTTRKAYDELELPEFDLDENLGEDYFASDGTLEGDSSVTASGETNAFGTDYAPPIGTKISKDFGTKGFFTGTVTSGPHIRDKDGDDATVWKVQYEDGDREDMTASEIAYWKMPTEEVQTSQTKAKSKKPKRTMATKPSGDRSEELED |
| Ga0210347_1321860 | Ga0210347_13218601 | F064726 | MVATQEVVTKATDNERKYRSPNRILARSFRLARDKWKQKYMDTRAALKRARQLATERGDSRDRWRAECDAALQQVRAAEALAQERLQELEQLRARELEVKKTLLTDAS |
| Ga0210347_1324931 | Ga0210347_13249312 | F023896 | MGLRRHLAWLAAALLFAAVALPFLVYLTGEFTLGPYARGGAARFMGDFYADLGRLRPVAWTLLLGPVALVIFWRILVAYAWPRAGE |
| Ga0210347_1326444 | Ga0210347_13264441 | F007352 | ADVRARYLQKMSRKLLSTTIHTPFNCPLDPYNGLRYWVDASLEKTVFADGTIFFHMSIDEKMYMKNPVPCRKDTFASIRRWYNTFQETSMQCGIFVLPLWLFRKHHGGEWGFTVGDTADDDVPTNLRMTCLQSSTIIYQVLSQSAMFPTGSYLHDVVASCYGDGLKALKMILQRAHPAFVDEPATLVT |
| Ga0210347_1340949 | Ga0210347_13409491 | F075701 | LLDMIKELVHNAGGVRNKFVIMQLLNRTLHGRGNTQRPNESLNECGKRFLQQVEVVEAVWGKLVPPCHESDNAKEKESARNQCLASLFLGGTDQARCKAAVNELNNNCVLGKDVCPVDVPAAIMLLTNRRGYNGFRQRRVEDLSDGLSILSFAQESKQGRDRGKVQCYKCDQFGHLSKNLKLTTKSPSAVDLTMIALEVEVE |
| Ga0210347_1342355 | Ga0210347_13423551 | F017093 | NKRENAKRKPHARNACDVAAVKAGKGRKHGSNPHLGPMRIAQAHDNGTVKLVKVADNNGGAVSQTWNIRNVEPRMA |
| Ga0210347_1344588 | Ga0210347_13445881 | F052605 | TKRAAAGKIKVVRFKIIPGDWGKAGSGWLTRLLQTAPSGATEAEFTSSSDGVRTPSNANEGLGSKRR |
| Ga0210347_1348930 | Ga0210347_13489301 | F075045 | IASTTTGQSASVVALTGTDGHSVWMTTDGRVWSGQVPMTGDHFNATFSGHMYEGDHFPDGTNHGTASMMIDHHSASTTSGRYTGSGDEGTFDMVPSPMWTRPTSLGTVAGVYTRTTSNGYTMTMTIGANGQLTGSDSRGCVVNGTVDIPDPTHNMHRIDATVTSCGSLDGHYQGMGTLLDADAMRDW |
| Ga0210347_1359717 | Ga0210347_13597171 | F047091 | MFGFLTPQTKDDADPLVSARTISAWLRHLPTQDVIARQHNVMRVFDGMRQSSRPVDLARVTAIQFLDTALGADRRQMVKQYVENIDRVARVADRAWQAAQEMSQGFVYAYQTSLERALSDGENPRWKPVIPQLFARLLHYHGTDAKLRSFRHERWIPAKWTNVHQLYARALELGVARVPVALASAGPGAMQWSPEQEYIYALLIQQLNMGSLSPVEIDWASAQMRAWGRKLEFEAIPRSTEGFYVDLASKRGLVRRTGGEAG |
| Ga0210347_1360186 | Ga0210347_13601861 | F064269 | VLRLITLLPLSVLMFMIPVLLSVCMVFACVPEVLYWLFGINTKRSTSRKLKSLIPTTLVNVKRYLGSTLHYFLSSTYNVVNTLLLPTKEQRLQRPSKRKALDRMFFMFLLMNHGRVSAKSARRTSYRVRPGLSEIPQAIPQDLSAEMLAPWDNIPQGWSQRLLNGNELKQFDPDNVIPVSETIDPNTGSNNPASWLIQSSPRLPEFQVPKLFILDQCTGATIMCLAGVVEKDSRLSVATFDSDTELVGIDNR |
| Ga0210347_1364609 | Ga0210347_13646091 | F054544 | YLDPMRITQVNDKGTVKLVKVADNNDGAVSQTWNIRNIEPRMA |
| Ga0210347_1370692 | Ga0210347_13706921 | F089622 | PLVPEPTESIKKEDLTAVNLCSDPGDHNLTQVKFMFKGLDGDHETPREILEWRRNVERALTGLDLNPAGAASYNMCKQFMRGSALSSFISKAGAILVTKKAEEIVRRETARDAYPGVAEAGHIAADFTALRVAVTAATTHDALDYLTKAYGPDVVKDSLNEVVKNLLPNKTLQRVKRCLRREARKPMDMTVKQYIMHIYRINTE |
| Ga0210347_1370929 | Ga0210347_13709292 | F005564 | MHKLIIGLMVIFFLGDPSLQTLAWLGEMKTYIVAAAIALVSIPFVVSQLDG |
| Ga0210347_1372290 | Ga0210347_13722901 | F043477 | RECVIALESLERLTSGAQPTSAAEIRRLQETVALNCSTNPAQRREQEEMAARLRVANGPECAEARNRLADMLGPDAAFTRE |
| Ga0210347_1385871 | Ga0210347_13858712 | F070130 | MTSVHEVPDTPARQPDVFVGWWEAVFHIKDGEQTDVTGIIEHIDAAGNFTVFRDGERIGAGHHVEFTVDPDGFTNVQEVAGTHTQTGRGLAVYRFSGDVLEVCKASEHQGRPTSFVSPRGSGWIHVAIRRISDD |
| Ga0210347_1386521 | Ga0210347_13865211 | F097365 | AVEMVYNSSWKEMKKRAIDTFARDGVMNVHELERIVDIGLADGDLDHQEKQVLINIISNLTGAEMTDAMWLKVDELIHKFDLHGDDEAFIEHFDDEQEF |
| Ga0210347_1394769 | Ga0210347_13947691 | F068326 | FYTEIEMNEARNLGVSNVTLRNWVGLNNSSSIIDYTTLQQNISSDEIDLTESERCRTFSNDIPGYHKTLLESSGVKDNVKDLNYSSAHCLHQNIQTLAHYLIDKIDTLQKTQLDIHHIEIITDRVFHNIEKLKNENRVNNSYVQSLENRTRNLEAKIDVLLMQNEIITQKC |
| Ga0210347_1415721 | Ga0210347_14157211 | F098390 | AYDELELLDFDLDKNLGEDYFAPGGNLEGDSSMTASRETRMYGTDYVRAIGTRIHKDFGTKGFFAGTVTSGPHIRNEDGDDVTIWKVQYADGDCEDMTALEIAYWKMPTEEVQTSQTKAKSKKPKQTMATKPSGDRSEELEDAIPTPGRDASAPTHLRRSTRLQQHALETARMNFLDSNPYLPMDSIGMYEAATCRIHLCDDDPYEELLHNVDEVETLLQDPVVLATTHRLLDPDADLNELRVNALQSEAISPEERALPRFSRRALKRL |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |