Metagenome Family F076187

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076187
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	65 residues
Representative Sequence	IICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK
Number of Associated Samples	82
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	83.90 %
% of genes from short scaffolds (< 2000 bps)	76.27 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (72.881 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (30.508 % of family members)
Environment Ontology (ENVO)	Unclassified (81.356 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.051 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.87% β-sheet: 0.00% Coil/Unstructured: 64.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF14947	HTH_45	34.75
PF13599	Pentapeptide_4	11.86
PF00805	Pentapeptide	5.93
PF00459	Inositol_P	2.54
PF12804	NTP_transf_3	1.69
PF02880	PGM_PMM_III	1.69
PF02878	PGM_PMM_I	1.69
PF07992	Pyr_redox_2	0.85
PF10592	AIPR	0.85
PF06418	CTP_synth_N	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	5.93
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	3.39
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	3.39
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.73 %
Unclassified	root	N/A	26.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.73 %
Unclassified	root	N/A	26.27 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	72.88 %
Unclassified	root	N/A	26.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	43.22 %
Unclassified	root	N/A	26.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	43.22 %
Unclassified	root	N/A	26.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	11.86 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	6.78 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples	1.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Candidatus Nitrosotenuis	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	6.78 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	5.93 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples	5.93 %
uncultured marine thaumarchaeote KM3_98_C03	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote KM3_98_C03	0.85 %
uncultured marine thaumarchaeote SAT1000_09_A04	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote SAT1000_09_A04	0.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
uncultured marine crenarchaeote HF4000_APKG6B14	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	5.93 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3.39 %
Nitrosarchaeum	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	1.69 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.85 %
uncultured marine thaumarchaeote KM3_98_C03	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote KM3_98_C03	0.85 %
uncultured marine thaumarchaeote SAT1000_09_A04	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote SAT1000_09_A04	0.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
uncultured marine crenarchaeote HF4000_APKG6B14	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	5.93 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3.39 %
Candidatus Nitrosarchaeum limnium	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Candidatus Nitrosarchaeum limnium	0.85 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.85 %
uncultured marine thaumarchaeote KM3_98_C03	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote KM3_98_C03	0.85 %
uncultured marine thaumarchaeote SAT1000_09_A04	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote SAT1000_09_A04	0.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000157\|LPaug08P261000mDRAFT_c1005319	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2181	Open in IMG/M
3300000196\|LPaug09P162000mDRAFT_c1002358	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2198	Open in IMG/M
3300000261\|LP_A_09_P20_1000DRAFT_1009461	All Organisms → cellular organisms → Archaea	1457	Open in IMG/M
3300000323\|LPaug09P202000mDRAFT_1056431	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	511	Open in IMG/M
3300000999\|JGI12126J13095_100428	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	2110	Open in IMG/M
3300001049\|JGI11855J13214_104171	All Organisms → cellular organisms → Archaea	938	Open in IMG/M
3300001123\|JGI11949J13268_1001895	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Candidatus Nitrosarchaeum limnium	2479	Open in IMG/M
3300001125\|JGI11931J13222_1002647	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1971	Open in IMG/M
3300001568\|JGI12071J15745_105001	All Organisms → cellular organisms → Archaea	983	Open in IMG/M
3300001579\|JGI11834J15748_1004307	Not Available	1161	Open in IMG/M
3300001707\|supr50_101443	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1963	Open in IMG/M
3300005593\|Ga0066837_10020713	All Organisms → cellular organisms → Archaea	2611	Open in IMG/M
3300005945\|Ga0066381_10166404	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300005948\|Ga0066380_10223274	Not Available	574	Open in IMG/M
3300005951\|Ga0066379_10047394	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1281	Open in IMG/M
3300005953\|Ga0066383_10122821	Not Available	777	Open in IMG/M
3300006013\|Ga0066382_10291313	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	561	Open in IMG/M
3300006076\|Ga0081592_1059006	Not Available	1700	Open in IMG/M
3300006076\|Ga0081592_1229296	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	564	Open in IMG/M
3300006304\|Ga0068504_1170516	Not Available	589	Open in IMG/M
3300006306\|Ga0068469_1126210	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1707	Open in IMG/M
3300006306\|Ga0068469_1126214	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	3342	Open in IMG/M
3300006306\|Ga0068469_1284530	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1748	Open in IMG/M
3300006306\|Ga0068469_1318684	All Organisms → cellular organisms → Archaea	723	Open in IMG/M
3300006306\|Ga0068469_1397189	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	554	Open in IMG/M
3300006308\|Ga0068470_1078970	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	23257	Open in IMG/M
3300006308\|Ga0068470_1123679	Not Available	1574	Open in IMG/M
3300006308\|Ga0068470_1127452	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1686	Open in IMG/M
3300006308\|Ga0068470_1154058	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	2818	Open in IMG/M
3300006308\|Ga0068470_1246659	Not Available	882	Open in IMG/M
3300006308\|Ga0068470_1389752	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300006309\|Ga0068479_1126906	All Organisms → cellular organisms → Archaea	880	Open in IMG/M
3300006309\|Ga0068479_1334780	All Organisms → cellular organisms → Archaea	677	Open in IMG/M
3300006310\|Ga0068471_1099916	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	3669	Open in IMG/M
3300006310\|Ga0068471_1272782	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1864	Open in IMG/M
3300006310\|Ga0068471_1604246	Not Available	1264	Open in IMG/M
3300006311\|Ga0068478_1218098	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1802	Open in IMG/M
3300006313\|Ga0068472_10487572	All Organisms → cellular organisms → Archaea	918	Open in IMG/M
3300006316\|Ga0068473_1368481	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1361	Open in IMG/M
3300006316\|Ga0068473_1379923	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1745	Open in IMG/M
3300006324\|Ga0068476_1412909	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1093	Open in IMG/M
3300006325\|Ga0068501_1091401	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	8913	Open in IMG/M
3300006325\|Ga0068501_1335217	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	514	Open in IMG/M
3300006325\|Ga0068501_1416162	Not Available	562	Open in IMG/M
3300006326\|Ga0068477_1443906	All Organisms → cellular organisms → Archaea	563	Open in IMG/M
3300006330\|Ga0068483_1309081	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1048	Open in IMG/M
3300006331\|Ga0068488_1289046	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1613	Open in IMG/M
3300006335\|Ga0068480_1208329	Not Available	632	Open in IMG/M
3300006338\|Ga0068482_1253574	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	4337	Open in IMG/M
3300006338\|Ga0068482_1353299	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1195	Open in IMG/M
3300006339\|Ga0068481_1507640	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1992	Open in IMG/M
3300006341\|Ga0068493_10390537	All Organisms → cellular organisms → Archaea	568	Open in IMG/M
3300006341\|Ga0068493_10453454	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote KM3_98_C03	780	Open in IMG/M
3300006341\|Ga0068493_10773127	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → environmental samples → uncultured marine thaumarchaeote SAT1000_09_A04	1095	Open in IMG/M
3300006347\|Ga0099697_1105031	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2028	Open in IMG/M
3300006347\|Ga0099697_1219013	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1672	Open in IMG/M
3300006347\|Ga0099697_1365409	All Organisms → cellular organisms → Archaea	730	Open in IMG/M
3300006347\|Ga0099697_1458143	All Organisms → cellular organisms → Archaea	877	Open in IMG/M
3300006414\|Ga0099957_1097720	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	5957	Open in IMG/M
3300006414\|Ga0099957_1146930	Not Available	1381	Open in IMG/M
3300006414\|Ga0099957_1313627	All Organisms → cellular organisms → Archaea	892	Open in IMG/M
3300006567\|Ga0099958_1124125	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2101	Open in IMG/M
3300006754\|Ga0098044_1395996	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	520	Open in IMG/M
3300006902\|Ga0066372_10504677	Not Available	711	Open in IMG/M
3300007510\|Ga0105013_1246502	All Organisms → cellular organisms → Archaea	1000	Open in IMG/M
3300007510\|Ga0105013_1278888	All Organisms → cellular organisms → Archaea	907	Open in IMG/M
3300008249\|Ga0105353_1053577	All Organisms → cellular organisms → Archaea	1049	Open in IMG/M
3300008249\|Ga0105353_1097520	All Organisms → cellular organisms → Archaea	713	Open in IMG/M
3300008250\|Ga0105354_1188803	Not Available	774	Open in IMG/M
3300008252\|Ga0105357_10173649	Not Available	924	Open in IMG/M
3300009008\|Ga0115649_1120747	Not Available	2415	Open in IMG/M
3300009052\|Ga0102886_1145921	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300009370\|Ga0118716_1188625	Not Available	986	Open in IMG/M
3300009595\|Ga0105214_110249	All Organisms → cellular organisms → Archaea	655	Open in IMG/M
3300020290\|Ga0211698_1003916	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2083	Open in IMG/M
3300020324\|Ga0211630_1014026	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1651	Open in IMG/M
3300020324\|Ga0211630_1015635	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1560	Open in IMG/M
3300020373\|Ga0211660_10061183	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1557	Open in IMG/M
3300020375\|Ga0211656_10065012	All Organisms → cellular organisms → Archaea	1165	Open in IMG/M
3300020425\|Ga0211549_10313646	All Organisms → cellular organisms → Archaea	636	Open in IMG/M
3300020435\|Ga0211639_10099999	Not Available	1227	Open in IMG/M
3300020449\|Ga0211642_10111085	All Organisms → cellular organisms → Archaea	1186	Open in IMG/M
3300021087\|Ga0206683_10424649	Not Available	662	Open in IMG/M
3300021089\|Ga0206679_10191706	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1145	Open in IMG/M
3300021791\|Ga0226832_10235354	All Organisms → cellular organisms → Archaea	728	Open in IMG/M
3300021792\|Ga0226836_10441635	All Organisms → cellular organisms → Archaea	959	Open in IMG/M
3300021973\|Ga0232635_1005445	Not Available	2861	Open in IMG/M
3300021978\|Ga0232646_1064815	All Organisms → cellular organisms → Archaea	1251	Open in IMG/M
3300025180\|Ga0208835_118545	All Organisms → cellular organisms → Archaea	977	Open in IMG/M
3300025180\|Ga0208835_119639	Not Available	939	Open in IMG/M
3300025192\|Ga0208064_103083	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1822	Open in IMG/M
3300025203\|Ga0208836_105331	Not Available	1505	Open in IMG/M
3300025219\|Ga0208470_1006033	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2240	Open in IMG/M
3300025220\|Ga0208055_1015132	All Organisms → cellular organisms → Archaea	1070	Open in IMG/M
3300025673\|Ga0209494_1017078	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	2673	Open in IMG/M
3300026262\|Ga0207990_1172914	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300026265\|Ga0208765_1021465	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2199	Open in IMG/M
3300028489\|Ga0257112_10229891	All Organisms → cellular organisms → Archaea	639	Open in IMG/M
3300031766\|Ga0315322_10135666	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1758	Open in IMG/M
3300031800\|Ga0310122_10038805	All Organisms → cellular organisms → Archaea	2617	Open in IMG/M
3300031800\|Ga0310122_10460283	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → environmental samples → uncultured marine crenarchaeote HF4000_APKG6B14	533	Open in IMG/M
3300031803\|Ga0310120_10085139	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1823	Open in IMG/M
3300031861\|Ga0315319_10321980	Not Available	778	Open in IMG/M
3300031886\|Ga0315318_10075422	Not Available	1839	Open in IMG/M
3300031886\|Ga0315318_10149268	Not Available	1319	Open in IMG/M
3300032006\|Ga0310344_10852570	All Organisms → cellular organisms → Archaea	770	Open in IMG/M
3300032278\|Ga0310345_10143152	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2128	Open in IMG/M
3300032360\|Ga0315334_11129319	All Organisms → cellular organisms → Archaea	677	Open in IMG/M
3300032360\|Ga0315334_11732924	Not Available	531	Open in IMG/M
3300032360\|Ga0315334_11802991	Not Available	519	Open in IMG/M
3300032820\|Ga0310342_100083795	All Organisms → cellular organisms → Archaea	2877	Open in IMG/M
3300032820\|Ga0310342_100297556	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1704	Open in IMG/M
3300034695\|Ga0372840_144150	All Organisms → cellular organisms → Archaea	711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	71.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.02%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.47%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	5.93%
Coastal	Environmental → Aquatic → Marine → Coastal	3.39%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	30.51%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	27.12%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	13.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.02%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	7.63%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	4.24%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.69%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	30.51%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	13.56%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	10.17%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.47%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	7.63%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.78%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.24%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	4.24%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.39%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.39%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	2.54%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	1.69%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.85%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.85%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.85%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000157	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000m	Environmental	Open in IMG/M
3300000196	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 2000m	Environmental	Open in IMG/M
3300000261	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_1000	Environmental	Open in IMG/M
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental	Open in IMG/M
3300000323	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000m	Environmental	Open in IMG/M
3300000999	Marine microbial communities from the Deep Pacific Ocean - MP1494	Environmental	Open in IMG/M
3300001049	Marine microbial communities from the Deep Pacific Ocean - MP2159	Environmental	Open in IMG/M
3300001123	Marine microbial communities from the Deep Atlantic Ocean - MP2969	Environmental	Open in IMG/M
3300001125	Marine microbial communities from the Deep Atlantic Ocean - MP0204	Environmental	Open in IMG/M
3300001568	Marine microbial communities from the Deep Indian Ocean - MP1374	Environmental	Open in IMG/M
3300001579	Marine microbial communities from the Deep Atlantic Ocean - MP0740	Environmental	Open in IMG/M
3300001707	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr50	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006303	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_1_1000m	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007510	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300008250	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM9B Gulf of Mexico	Environmental	Open in IMG/M
3300008252	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM15B Gulf of Mexico	Environmental	Open in IMG/M
3300009008	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300020290	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556131-ERR599154)	Environmental	Open in IMG/M
3300020324	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555936-ERR599033)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020425	Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021792	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Illium_FS922 150_kmer	Environmental	Open in IMG/M
3300021973	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmer	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300025180	Marine microbial communities from the Deep Indian Ocean - MP1374 (SPAdes)	Environmental	Open in IMG/M
3300025192	Marine microbial communities from the Deep Atlantic Ocean - MP0145 (SPAdes)	Environmental	Open in IMG/M
3300025203	Marine microbial communities from the Deep Atlantic Ocean - MP0627 (SPAdes)	Environmental	Open in IMG/M
3300025219	Marine microbial communities from the Deep Atlantic Ocean - MP0740 (SPAdes)	Environmental	Open in IMG/M
3300025220	Marine microbial communities from the Deep Pacific Ocean - MP2159 (SPAdes)	Environmental	Open in IMG/M
3300025673	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300026265	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203 (SPAdes)	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug08P261000mDRAFT_10053197	3300000157	Marine	SVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL*
LPaug09P162000mDRAFT_10023588	3300000196	Marine	LVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL*
LP_A_09_P20_1000DRAFT_10094611	3300000261	Marine	MPDCINPALTVSVIICPDGLVSLAITHFFEFISIEKFFXNFKXSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
LP_A_09_P04_500DRAFT_100068312	3300000264	Marine	THFFDFTSTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
LPaug09P202000mDRAFT_10564313	3300000323	Marine	SVAITHFFEFISTEKFFENFKTSRNVKSFPXIPLIPDTDIFNASNXDTLFINSERKWLVPR*
JGI12126J13095_1004281	3300000999	Deep Ocean	THFFEFISIEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
JGI11855J13214_1041715	3300001049	Deep Ocean	VAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
JGI11949J13268_10018958	3300001123	Deep Ocean	MPDCINPALTVSVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
JGI11931J13222_10026476	3300001125	Deep Ocean	MPDCINPALTVSVIICPDGLVSLAITHFFEFISXEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
JGI12071J15745_1050015	3300001568	Deep Ocean	LVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
JGI11834J15748_10043071	3300001579	Deep Ocean	MPDCINPALTVSVIICPDGLVSLAITHFFEFISXEKFFENFXTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
supr50_1014437	3300001707	Hydrothermal Vent Plume	VIICPDGLVSVAIKHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
Ga0066837_100207135	3300005593	Marine	MIRPDGLVSVAITHFFELINVEKFFENFNTSRNVKSFPKIPLIPEMDIFNASNLDTLFINSEWN*
Ga0066381_101664043	3300005945	Marine	TVSTIICPDGLVSLAITHFFEFISTEKFFENFKMSRNVKSFPKTPLIPDTDIFNTPT*
Ga0066380_102232743	3300005948	Marine	DSISPALTVSTMICPDGLVSTATTHFFELINVEKFFENFNTSRNVKSFPKIPLIPEMDIFNASNLDTLFINSEWN*
Ga0066379_100473946	3300005951	Marine	MMDDDGLVSLAITHFFDLINVEKLFENFKISYSVRSFPKIPLIPETDIFNASNLDMLFINSKRN*
Ga0066383_101228213	3300005953	Marine	CINPALTVSVIICPDGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFNASNSDTLFINSERKWLVPR*
Ga0066382_102913133	3300006013	Marine	VIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPKTPLIPDTDIFNASNSDTLFINSERK*
Ga0081592_10590064	3300006076	Diffuse Hydrothermal Fluids	VSVIICPDGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL*
Ga0081592_12292961	3300006076	Diffuse Hydrothermal Fluids	VSVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
Ga0068490_11778661	3300006303	Marine	FFDFTSTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068504_11705163	3300006304	Marine	DGLVSAAITHFLELTNTEKFFENFNTSRSVKSFPKIPLIPEIDIFNASNLDTLFINSEWN
Ga0068469_11262106	3300006306	Marine	PVGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0068469_11262149	3300006306	Marine	LSDDITHFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0068469_12845301	3300006306	Marine	ICPVGLVSVAITHFIEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL
Ga0068469_13186841	3300006306	Marine	FTVSTIICPDGLVSLAITHFFDFASTEKIFENFKISSNVKSIPKTPLIPDTDIFYVSNLDTLFIKL*
Ga0068469_13971892	3300006306	Marine	MPDCINPALTVSTIICPDGLVSHAMTHFFDFASTEKFFENFKISSNVKSFPKTPLIPDIDIFNVSNLDTLFIKL*
Ga0068470_10789701	3300006308	Marine	CDILITHFFEFISTEKFFENFKKSRNIKSFPKMPLIPDTDIFNASNLDTLFIKL*
Ga0068470_11236791	3300006308	Marine	AGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0068470_11274528	3300006308	Marine	SIQAITHFFDFASTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068470_11540589	3300006308	Marine	VSVAITHFFEFISTEKFLENFKISRNIKSFPKTPLIPDTDIFNASHSDRLFINSERKCLVPR*
Ga0068470_12466591	3300006308	Marine	LVSLAITHFFDFTSTEKLFVNFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068470_12998936	3300006308	Marine	DFTSTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068470_13897521	3300006308	Marine	TICPVGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKMPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068479_11269063	3300006309	Marine	MIRPDGLVSAAITHFFELISAEKFFENFNTSRNTKSFPKTPLIPEIDIFNASNLDTLFINSEWN*
Ga0068479_13347805	3300006309	Marine	ATICPVGLVSEEMTQFFEFISTEKYFENFKISRNIKSFPKMPLIPDTDIFIASNLATLFIKL*
Ga0068471_10999167	3300006310	Marine	MPDCINPALTVSAIICPDGLVSLAITHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068471_12727824	3300006310	Marine	MPHCINPALTVSATICPVCLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL*
Ga0068471_13074281	3300006310	Marine	FTSTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068471_16042464	3300006310	Marine	MIRPDGLVSAATTHFFELTNTEKFFENFNTSRNVKSFPKIPLIPEIDIFNASNLDTLFINSEWN*
Ga0068478_12180986	3300006311	Marine	STIICPDGLVSLAITHFFEFISTEKFFVNFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068472_104875725	3300006313	Marine	TASVIIRPVGLVSLAITHFFEFISTEKFFENFKMSRNVKSFPKIPLIPDTDIFNAPT*
Ga0068473_13684816	3300006316	Marine	LITVNFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFLNSERKWLVPR
Ga0068473_13799233	3300006316	Marine	MTVSVIICPDGLVSHAITHFFEFISIEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068476_14129091	3300006324	Marine	PHCISPALTVSAIIFLDSLVSVPTTHFFDFIRTEKLFENFKTSFNIRSFPKIPLMPEMDIFTV*
Ga0068501_10914011	3300006325	Marine	NPALTVSATICPVGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL*
Ga0068501_13352174	3300006325	Marine	DDDGLVSLAITHFFDLIRAEKLFENFKISYSVRSFPKIPLIPETDIFNASNLDMLFINSKRN*
Ga0068501_14161621	3300006325	Marine	AITQFFEFISTEKFFENFKISRSIKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0068477_14439065	3300006326	Marine	AITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL*
Ga0068483_13090816	3300006330	Marine	IICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
Ga0068488_12890461	3300006331	Marine	SIIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068480_12083291	3300006335	Marine	ALTVSTIICPDGLVSLAITHFFDFASTEKFFVNFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068482_12535741	3300006338	Marine	GLVSAAITHFFEFISTEKFFENFKISRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068482_13532996	3300006338	Marine	TMYPDGLVSLAITHFFEFISAEKLFENFKMSRNVKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0068481_15076407	3300006339	Marine	STIMCPDGLVSLAITHFFDFASTEKFFVNFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068493_102592475	3300006341	Marine	THFFDFASTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0068493_103905373	3300006341	Marine	GLVSLAITHFFEFISIEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0068493_104534541	3300006341	Marine	MIRPDGLVSAAITHFFELIYTEKFFENFNTSRSVKSFPKIPLIPEIDIFNASNLDTLFINSEWN*
Ga0068493_107731271	3300006341	Marine	GLVSLAITHFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSEWN*
Ga0099697_11050316	3300006347	Marine	LTVSATICPVGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL*
Ga0099697_12190131	3300006347	Marine	NPALTVSVIICPDGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKMPLIPDTDIFNASNLDTLFIKL*
Ga0099697_13654093	3300006347	Marine	VSAIICPVGLVSVAMTHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR*
Ga0099697_14581431	3300006347	Marine	LAITHFFEFISIEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0099957_109772014	3300006414	Marine	SLALTVSTMTRPDGLVSVATTHFFELTNTEKFFENFNTSRNVKSFPKIPLIPDTDIFNASNLDTLFIKL*
Ga0099957_11469301	3300006414	Marine	ICPDGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFIASNLDTLFIKL
Ga0099957_13136274	3300006414	Marine	VSVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDNFNDSNLDTLFIKL*
Ga0099958_11241257	3300006567	Marine	ISPALTVSTMIRPDGLVSVAITHFFELINTEKFFENFNTSRSVKSFPKIPLIPEIDIFNASNLDTLFINSEWN*
Ga0098044_13959963	3300006754	Marine	INPALTVSAIICPVGLVSVAITHFFEFISTEKFFENFKISSNVKSFPKIPLIPDTDIFNVSNLDTLFIKL*
Ga0066372_105046771	3300006902	Marine	TSIPDSISPALTVSTMIRPDGLVSVAITHFFELINTEKFFENFNTSRNVKSFPKIPLIPEIDIFNASNLDMLFINSEWN*
Ga0105013_12465021	3300007510	Marine	STIICPDGLVSLVITHFFDFASTEKFFENFKILSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL*
Ga0105013_12788884	3300007510	Marine	STIICPDGLVSLVITHFFDFASTEKFFENFKISSNVKSFPKTPLIPDIDIFNVSNLDTLFIKL*
Ga0105353_10535774	3300008249	Methane Seep Mesocosm	TICPVGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL*
Ga0105353_10975201	3300008249	Methane Seep Mesocosm	ICPVGLVSVAITHFFEFTSTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFIKL
Ga0105354_11888031	3300008250	Methane Seep Mesocosm	SIPDSISPALTVSTMICPDGLVSTATTHFFELINVEKFFENFNTSRNVKSFPKIPLIPEIDIFNASNLDTLFINSEWN*
Ga0105357_101736493	3300008252	Methane Seep Mesocosm	VAITHFFEFISTEKFFENFKISRNIKSFPKMPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0115649_11207471	3300009008	Marine	STIICPDGLVSLVITHFFDFANTEKFFENFKISSNVKSFPKMPLIPDTDIFNVSNLDTLFIKL*
Ga0102886_11459211	3300009052	Estuarine	ICPVGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL
Ga0118716_11886255	3300009370	Marine	DCINPALTVSTIICPDGLVSLVITHFFDFASTEKLFENFKISSNVKSFPKIPLIPDIDIFNVSNLDTLFIKL*
Ga0105214_1102494	3300009595	Marine Oceanic	LATTHFFEFISIEKFFENFNTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0211698_10039161	3300020290	Marine	NPALTVSTIICPDGLVSLAITHFFDFASTEKFFVNFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL
Ga0211630_10140266	3300020324	Marine	LVSLAITHFFDFTSTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL
Ga0211630_10156351	3300020324	Marine	GLVSVAITHFFEFISTEKFFENFKISRNIKSFPKMPLIPDTDIFNASNLDTLFIKL
Ga0211660_100611831	3300020373	Marine	SLAITHFFDFASTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL
Ga0211656_100650121	3300020375	Marine	VAITHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0211549_103136461	3300020425	Marine	IPHCIKPAFAVSAMMDDDGLVSLAITHFFDLIRAEKLFENFKISRSVKSFPKIPLIPETDIFNASNLDMLFINSKRN
Ga0211639_100999993	3300020435	Marine	ITHFFEFISTEKFFENFKISRNIKSFPTTPLIPDTDIFIASNLDTLFINSERKWLVPR
Ga0211642_101110851	3300020449	Marine	VSVAITHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0206683_104246491	3300021087	Seawater	SVIICPVGLVSLAITHFFEFISTEKFFENFKMSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0206679_101917061	3300021089	Seawater	GLVSVAITHFFEFISTEKFFENFKISRSIKSFPKIPLIPDTDIFNASNLDTLFIKL
Ga0226832_102353541	3300021791	Hydrothermal Vent Fluids	VAITHFFEFINTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0226836_104416351	3300021792	Hydrothermal Vent Fluids	DCINPALTVSVIICPDGLVSLATTHFFEFISIEKFFENFNTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0232635_10054455	3300021973	Hydrothermal Vent Fluids	ICPVGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFIASNLDTLFIKL
Ga0232646_10648151	3300021978	Hydrothermal Vent Fluids	IICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPKTPLIPDTDIFNASNSDTLFINSERK
Ga0208835_1185454	3300025180	Deep Ocean	PDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSER
Ga0208835_1196391	3300025180	Deep Ocean	PALTVSVIICPDGLVSLAITHFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0208064_1030836	3300025192	Deep Ocean	THFFEFISIEKFFENFNTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0208836_1053311	3300025203	Deep Ocean	SLAITHFFEFISTEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVP
Ga0208470_10060331	3300025219	Deep Ocean	INPALTVSVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK
Ga0208055_10151321	3300025220	Deep Ocean	SVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK
Ga0209494_10170781	3300025673	Methane Seep Mesocosm	ALTVSATICPVGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFNASNLDTLFIKL
Ga0207990_11729141	3300026262	Marine	STMICPDGLVSAATTHFFELANVEKFFENFNTSRNVKSFPKIPLIPEMDIFNASNLDTLFINSEWN
Ga0208765_10214657	3300026265	Marine	DCINPALTVSATICPVGLVSVAITHFFEFISTEKFFENFKISRNIKSFPKTPLIPDTDIFNASNLDTLFIKL
Ga0257112_102298911	3300028489	Marine	INPALTVSVIICPDGLVSVAITHFFEFISTEKFFENFKISRNIKSFPNIPLIPDTDIFNASNSDTLFINSERKWLVPR
Ga0315322_101356661	3300031766	Seawater	ICPDGLVSLAITHFFDFASTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL
Ga0310122_100388051	3300031800	Marine	VSVIICPDGLVSVAITHFFEFISTEKFFENFKTSRNVKSFPKTPLIPDTDIFNASNSDTLFINSERK
Ga0310122_104602833	3300031800	Marine	NPALTVSVIICPDGLVSLAITHFFEFISIEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0310120_100851391	3300031803	Marine	PALTVSVIICPDGLVSLAITHFFEFISIEKFFENFKTSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0315319_103219801	3300031861	Seawater	DCINTALTVSVIICPVGLVSLAITHFFEFISTEKFFENFKMSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0315318_100754223	3300031886	Seawater	VSVIICPVGLVSLAITHFFEFISTEKFFENFKMSRNVKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0315318_101492683	3300031886	Seawater	TVSTIICPDGLVSLAITHFFEFASTEKFFENFKISSNVKSFPKTPLIPDTDIFNVSNLDMLFIKL
Ga0310344_108525703	3300032006	Seawater	VGLVSVAITHFFEFINVEKFFENFNISRSVRSFPTTPLIPDIDIFNISNLDTLFIKL
Ga0310345_101431528	3300032278	Seawater	AITGPDGLVSVAITHFFEFISTEKFLENFKISRNIKSFPKTPLIPDTDIFNASHSDRLFINSERKCLVPR
Ga0315334_111293194	3300032360	Seawater	DGLVSVAITHFFEFISTEKFLENFKISRNIKSFPKTPLIPDTDIFNASHSDRLFINSERKCLVPR
Ga0315334_117329241	3300032360	Seawater	TVSTMICPDGLVSAAITHFFELINTEKFFENFNTSRSVKSFPKIPLIPEIDIFNASNLDTLFINSEWN
Ga0315334_118029912	3300032360	Seawater	SISPALTVSAMICPDGLVSVDTTHFFELTNTEKFFENFNTSRNVKSFPKIPLIPEIDIFNASNLDTLFINSEWK
Ga0310342_1000837954	3300032820	Seawater	TIICPDGLVSLAITHFFEFISTEKFFVNFNISSNVKSFPKTPLIPDTDIFNVSNLDTLFIKL
Ga0310342_1002975566	3300032820	Seawater	MPDCINPALTVSAIICPDGLVSLAITHFFEFISTEKFFENFKISRNIKSFPKIPLIPDTDIFNASNLDTLFINSERKWLVPR
Ga0372840_144150_454_678	3300034695	Seawater	MPDCINPALTVSATICPVGLVSVAITHFFEFTSTEKFFENFKISRSIKSFPKMPLIPDTDIFNASNLDTLFIKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076187

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences