NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076251

Metagenome / Metatranscriptome Family F076251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076251
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 78 residues
Representative Sequence MTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE
Number of Associated Samples 95
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.36 %
% of genes near scaffold ends (potentially truncated) 26.27 %
% of genes from short scaffolds (< 2000 bps) 75.42 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.746 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen
(15.254 % of family members)
Environment Ontology (ENVO) Unclassified
(33.898 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.610 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.21%    β-sheet: 0.00%    Coil/Unstructured: 45.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF02233PNTB 40.68
PF12769PNTB_4TM 34.75
PF01262AlaDh_PNT_C 5.08
PF03054tRNA_Me_trans 3.39
PF05222AlaDh_PNT_N 1.69
PF13193AMP-binding_C 1.69
PF01048PNP_UDP_1 1.69
PF03466LysR_substrate 1.69
PF04940BLUF 0.85
PF02540NAD_synthase 0.85
PF00501AMP-binding 0.85
PF06993DUF1304 0.85
PF02913FAD-oxidase_C 0.85
PF08335GlnD_UR_UTase 0.85
PF00990GGDEF 0.85
PF07769PsiF_repeat 0.85
PF03480DctP 0.85
PF13298LigD_N 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG1282NAD/NADP transhydrogenase beta subunitEnergy production and conversion [C] 40.68
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 3.39
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 1.69
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 1.69
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 1.69
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.85
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.85
COG2844UTP:GlnB (protein PII) uridylyltransferaseSignal transduction mechanisms [T] 0.85
COG3759Uncharacterized membrane proteinFunction unknown [S] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.75 %
UnclassifiedrootN/A15.25 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002705|JGI25156J39149_1000141All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales53180Open in IMG/M
3300002772|JGI25164J39214_1006557All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1216Open in IMG/M
3300003316|rootH1_10004042All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300003752|Ga0055539_1001306All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4873Open in IMG/M
3300003761|Ga0055535_1010658All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1496Open in IMG/M
3300005327|Ga0070658_10334987All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1293Open in IMG/M
3300005327|Ga0070658_12003917All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales500Open in IMG/M
3300005329|Ga0070683_101191191All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales732Open in IMG/M
3300005336|Ga0070680_101566037All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300005456|Ga0070678_101353563All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300005459|Ga0068867_102016093All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005519|Ga0077119_10021710All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae5634Open in IMG/M
3300005519|Ga0077119_10056753All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2580Open in IMG/M
3300005519|Ga0077119_10072985All Organisms → cellular organisms → Bacteria2086Open in IMG/M
3300005539|Ga0068853_100851365All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300005543|Ga0070672_101014071All Organisms → cellular organisms → Bacteria → Proteobacteria736Open in IMG/M
3300005563|Ga0068855_100002302All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales23614Open in IMG/M
3300005616|Ga0068852_102013405All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005617|Ga0068859_103000162All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005843|Ga0068860_100267568All Organisms → cellular organisms → Bacteria1667Open in IMG/M
3300006195|Ga0075366_10004026All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales7858Open in IMG/M
3300006353|Ga0075370_10003936All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales7132Open in IMG/M
3300009093|Ga0105240_10079175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4044Open in IMG/M
3300009098|Ga0105245_10252851All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1713Open in IMG/M
3300009148|Ga0105243_10398000All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1279Open in IMG/M
3300009176|Ga0105242_13137161All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales513Open in IMG/M
3300009551|Ga0105238_10005052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria13041Open in IMG/M
3300009551|Ga0105238_12848425All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009660|Ga0105854_1034736All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1572Open in IMG/M
3300009787|Ga0116226_11259851All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales697Open in IMG/M
3300010371|Ga0134125_11634430All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales701Open in IMG/M
3300010877|Ga0126356_11128560Not Available664Open in IMG/M
3300012515|Ga0157338_1010205All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales944Open in IMG/M
3300013296|Ga0157374_10698629All Organisms → cellular organisms → Bacteria → Proteobacteria1027Open in IMG/M
3300013297|Ga0157378_10248294All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1703Open in IMG/M
3300014969|Ga0157376_11936951All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales627Open in IMG/M
3300014969|Ga0157376_12062568Not Available608Open in IMG/M
3300021403|Ga0210397_10309366All Organisms → cellular organisms → Bacteria → Proteobacteria1162Open in IMG/M
3300021475|Ga0210392_10185036All Organisms → cellular organisms → Bacteria → Proteobacteria1445Open in IMG/M
3300021861|Ga0213853_11266660All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300022908|Ga0247779_1004794All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax5218Open in IMG/M
3300025226|Ga0209674_100067All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales253824Open in IMG/M
3300025231|Ga0207427_100250All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales42521Open in IMG/M
3300025242|Ga0209258_100442All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales46898Open in IMG/M
3300025246|Ga0209646_1000012All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales573300Open in IMG/M
3300025256|Ga0209759_1006745All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3808Open in IMG/M
3300025256|Ga0209759_1022630All Organisms → cellular organisms → Bacteria → Proteobacteria1401Open in IMG/M
3300025903|Ga0207680_11283821Not Available521Open in IMG/M
3300025909|Ga0207705_10048626All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3051Open in IMG/M
3300025913|Ga0207695_10086076All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3171Open in IMG/M
3300025919|Ga0207657_10306686Not Available1257Open in IMG/M
3300025924|Ga0207694_11274870Not Available622Open in IMG/M
3300025927|Ga0207687_11075317All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales691Open in IMG/M
3300025932|Ga0207690_11834981Not Available506Open in IMG/M
3300025935|Ga0207709_10741635All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales789Open in IMG/M
3300025935|Ga0207709_11067804Not Available662Open in IMG/M
3300025942|Ga0207689_10934729All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales732Open in IMG/M
3300025944|Ga0207661_11521482All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales613Open in IMG/M
3300025949|Ga0207667_10002877All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales21376Open in IMG/M
3300026121|Ga0207683_10929221All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales808Open in IMG/M
3300026142|Ga0207698_11719983Not Available643Open in IMG/M
3300026142|Ga0207698_12266883All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales555Open in IMG/M
3300028562|Ga0302151_10068174Not Available1267Open in IMG/M
3300028573|Ga0265334_10083532All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1173Open in IMG/M
3300028666|Ga0265336_10000011All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales275816Open in IMG/M
3300028765|Ga0302198_10062433Not Available2195Open in IMG/M
3300028783|Ga0302279_10001810All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales29613Open in IMG/M
3300028783|Ga0302279_10362696All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales617Open in IMG/M
3300028813|Ga0302157_10217546All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1084Open in IMG/M
3300028813|Ga0302157_10258033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales970Open in IMG/M
3300028813|Ga0302157_10588464All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales574Open in IMG/M
3300028861|Ga0302259_1193685Not Available511Open in IMG/M
3300028882|Ga0302154_10130275All Organisms → cellular organisms → Bacteria → Proteobacteria1328Open in IMG/M
3300029951|Ga0311371_10018892All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales12904Open in IMG/M
3300029951|Ga0311371_10526259All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1549Open in IMG/M
3300029954|Ga0311331_10606403All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1035Open in IMG/M
3300029984|Ga0311332_10873842All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales719Open in IMG/M
3300029987|Ga0311334_10133524All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1859Open in IMG/M
3300029987|Ga0311334_10753175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae799Open in IMG/M
3300029987|Ga0311334_11804882Not Available522Open in IMG/M
3300029987|Ga0311334_11925019All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae506Open in IMG/M
3300030000|Ga0311337_11116468Not Available689Open in IMG/M
3300030002|Ga0311350_10696862All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales912Open in IMG/M
3300030114|Ga0311333_10547668All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales953Open in IMG/M
3300030225|Ga0302196_10022613All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4773Open in IMG/M
3300030294|Ga0311349_10719360All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales942Open in IMG/M
3300030294|Ga0311349_11073976All Organisms → cellular organisms → Bacteria → Proteobacteria753Open in IMG/M
3300030294|Ga0311349_11679956All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales587Open in IMG/M
3300030520|Ga0311372_10024836All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales12452Open in IMG/M
3300030520|Ga0311372_10256696All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2822Open in IMG/M
3300030520|Ga0311372_12031687All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales671Open in IMG/M
3300030521|Ga0307511_10428386All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300030688|Ga0311345_10386587All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1264Open in IMG/M
3300030746|Ga0302312_10224774All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales717Open in IMG/M
3300031232|Ga0302323_100411829All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1431Open in IMG/M
3300031232|Ga0302323_101132625All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales873Open in IMG/M
3300031232|Ga0302323_102237285All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fynbosensis623Open in IMG/M
3300031640|Ga0318555_10497635Not Available661Open in IMG/M
3300031716|Ga0310813_10256062All Organisms → cellular organisms → Bacteria → Proteobacteria1459Open in IMG/M
3300031722|Ga0311351_10422449All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1010Open in IMG/M
3300031730|Ga0307516_10003970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales18575Open in IMG/M
3300031736|Ga0318501_10177268All Organisms → cellular organisms → Bacteria → Proteobacteria1107Open in IMG/M
3300031765|Ga0318554_10538593All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales659Open in IMG/M
3300031902|Ga0302322_100430698All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1520Open in IMG/M
3300031912|Ga0306921_10125379All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2995Open in IMG/M
3300031918|Ga0311367_11329188All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales710Open in IMG/M
3300031938|Ga0308175_100856630All Organisms → cellular organisms → Bacteria → Proteobacteria997Open in IMG/M
3300031939|Ga0308174_11836127All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales521Open in IMG/M
3300031996|Ga0308176_10671985All Organisms → cellular organisms → Bacteria → Proteobacteria1072Open in IMG/M
3300031996|Ga0308176_12054544Not Available610Open in IMG/M
3300032064|Ga0318510_10230712All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae756Open in IMG/M
3300032065|Ga0318513_10070058All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1604Open in IMG/M
3300032066|Ga0318514_10200155All Organisms → cellular organisms → Bacteria → Proteobacteria1046Open in IMG/M
3300032074|Ga0308173_11859639Not Available567Open in IMG/M
3300032074|Ga0308173_12213301Not Available519Open in IMG/M
3300033290|Ga0318519_10429188All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales790Open in IMG/M
3300034170|Ga0370487_0000138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales23200Open in IMG/M
3300034820|Ga0373959_0030324Not Available1089Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen15.25%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog9.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.63%
Arabidopsis RootHost-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root5.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.08%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.08%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.08%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.24%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.24%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root3.39%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.39%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.69%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.69%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.69%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.85%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.85%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.85%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.85%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.85%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.85%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002705Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMSHost-AssociatedOpen in IMG/M
3300002772Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMSHost-AssociatedOpen in IMG/M
3300003316Sugarcane root Sample L1Host-AssociatedOpen in IMG/M
3300003752Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2Host-AssociatedOpen in IMG/M
3300003761Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005519Combined assembly of arab plate scrape CL_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022908Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5EnvironmentalOpen in IMG/M
3300025226Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025231Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025242Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025246Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)Host-AssociatedOpen in IMG/M
3300025256Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028562Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3EnvironmentalOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028861Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030225Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3EnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1EnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25156J39149_1000141463300002705Arabidopsis RootMTTPPRSPFWRVLQLIAGIALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE*
JGI25164J39214_100655733300002772Arabidopsis RhizosphereMNTFVPESPPRSPFWRVLQLIAGVALFLYALRLLSPMPDDRAGFILLVAILAAGSMALTDSIVGVLLAALDKMQKKGNE*
rootH1_1000404233300003316Sugarcane Root And Bulk SoilMTMPVPQTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRPGFVLLVAILAAGSMALTDSIVGLVIAALDKMQKKGNE*
Ga0055539_100130633300003752Arabidopsis RootMTMLVPETVPRSPFWRVLQLIAGVALFLYSLRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLAIAALDKMQKKGNE*
Ga0055535_101065813300003761Arabidopsis RootMTTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLVVAGLDKMHKKGNE*
Ga0070658_1033498723300005327Corn RhizosphereMSILVPETPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVAMLDKMHKKGNE*
Ga0070658_1200391723300005327Corn RhizosphereMTILVPDTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSLVGLLVATLDKMHKKGNE*
Ga0070683_10119119113300005329Corn RhizosphereRSPFWRVLQLIAGIALFLYALRLLSPMPGDRTGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE*
Ga0070680_10156603723300005336Corn RhizosphereMSILVPETPPRNPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVAMLDKMHKKGNE*
Ga0070678_10135356323300005456Miscanthus RhizosphereTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE*
Ga0068867_10201609313300005459Miscanthus RhizosphereMTILVPDTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE*
Ga0077119_1002171033300005519Arabidopsis RootMTAPLPETPPRSAFWRVVQFVTGVALFLYALRLVAPMPNDRAGFILLVALLAVGSMALTDSIVGLILAVFEKMQKKGNE*
Ga0077119_1005675323300005519Arabidopsis RootMTILVPEAAPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFEKMQKRRDE*
Ga0077119_1007298533300005519Arabidopsis RootMTTPPRSPFWRVLQLIAGVALFLYALRLVAPMPNDRTGFILLVALLAAGSMALTDSIVGLLAAAFDKTQKRENE*
Ga0068853_10085136523300005539Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE*
Ga0070672_10101407133300005543Miscanthus RhizosphereMTALVPEASPRSPFWRVVQFVAGVALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFDKMQKRRDE*
Ga0068855_100002302123300005563Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVATLDKMHKKGNE*
Ga0068852_10201340523300005616Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE*
Ga0068859_10300016213300005617Switchgrass RhizosphereMTTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE*
Ga0068860_10026756823300005843Switchgrass RhizosphereMTILVPDTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQRKGNE*
Ga0075366_1000402643300006195Populus EndosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVAALDKMHKKGNE*
Ga0075370_1000393623300006353Populus EndosphereMTPLVPEPPPRSPFWRVVQFVAGVALFLYALRLVAPMPNDRAGFVLLVALLAAGSMALTDSIVGLILAVFDKMQKKGNE*
Ga0105240_1007917523300009093Corn RhizosphereMTPPPRSPFWRVLQLIAGIALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE*
Ga0105245_1025285123300009098Miscanthus RhizosphereMNTFVPESPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE*
Ga0105243_1039800033300009148Miscanthus RhizosphereMNALVPQSPPRSPFWRVLQLIAGVALFLYALRLLSPMPDDRAGFILLVAILAAGSMALTDSIVGVLLAALDKMQKKGNE*
Ga0105242_1313716113300009176Miscanthus RhizosphereVPQEGTSGRGQGPGMTILVPDTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE*
Ga0105238_10005052103300009551Corn RhizosphereMTTPPRSPFWRVLQLIAGIALFLYALRLLSPMPGDRTGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE*
Ga0105238_1284842513300009551Corn RhizosphereMTTLVPEASPRSPFWRVVQFVAGGALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFDKMQKRRDE*
Ga0105854_103473623300009660Permafrost SoilMMTLVPETTPAVSARSPFWRVVQVIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ*
Ga0116226_1125985123300009787Host-AssociatedMMTLVPETPPPAARSPFWRVVQVIAGVSLFLYALRLLAPMPSDRSGFVLLVALLAVGSMALADSVVGLVASLFEKLQKGPQP*
Ga0134125_1163443023300010371Terrestrial SoilMNTLVPETPPRSPFWRVLQLIAGVALFLYALRLLSPMPDDRAGFILLVAILAAGSMALTDSIVGVLATALDKMQKKGNE*
Ga0126356_1112856023300010877Boreal Forest SoilMMTLVPEPAPTARSPFWRVLQLIAGAALFLYALRLLPPMPVERVGFVVIVAVLAAGSMALADSIVGLIATAFENLQKGGKQ*
Ga0157338_101020513300012515Arabidopsis RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVAALDKMHKKG
Ga0157374_1069862913300013296Miscanthus RhizospherePFWRVLQLIAGIALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVAALDKMHKKGNE*
Ga0157378_1024829433300013297Miscanthus RhizosphereMTTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQRKGNE*
Ga0157376_1193695113300014969Miscanthus RhizosphereGMTTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE*
Ga0157376_1206256823300014969Miscanthus RhizosphereMNALVPQSPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE*
Ga0210397_1030936623300021403SoilMMTLVPESPAPARSPFWRVLQLIVGAALFLYALRLLPPMPLERVGFVVIAALLAAGSMALSDSVVGLIATVFENLQKGGKQ
Ga0210392_1018503623300021475SoilMSVLVPETPPRSPFWRVVQLVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALSDSIVGVIVAIFEKTQKRNNE
Ga0213853_1126666023300021861WatershedsMTTLVPEAPPRSPFWRVLQLVAGVALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFEKMQKRRDE
Ga0247779_100479433300022908Plant LitterMTPPEPSRRGPFWRVVQLVGGIALFLCALRLLSPMPGDRAGFVLLVALLAAGSMALADSIVGLIIAILDKMHGRGNQ
Ga0209674_100067163300025226Arabidopsis RootMTMLVPETVPRSPFWRVLQLIAGVALFLYSLRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLAIAALDKMQKKGNE
Ga0207427_10025083300025231Arabidopsis RhizosphereMNTFVPESPPRSPFWRVLQLIAGVALFLYALRLLSPMPDDRAGFILLVAILAAGSMALTDSIVGVLLAALDKMQKKGNE
Ga0209258_100442123300025242Arabidopsis RootMTTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLVVAGLDKMHKKGNE
Ga0209646_1000012343300025246Arabidopsis RootMTTPPRSPFWRVLQLIAGIALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE
Ga0209759_100674523300025256Arabidopsis RootMTAPLPETPPRSAFWRVVQFVTGVALFLYALRLVAPMPNDRAGFILLVALLAVGSMALTDSIVGLILAVFEKMQKKGNE
Ga0209759_102263023300025256Arabidopsis RootMTILVPEAAPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFEKMQKRRDE
Ga0207680_1128382123300025903Switchgrass RhizosphereMTTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE
Ga0207705_1004862623300025909Corn RhizosphereMSILVPETPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLLVAALDKLHKKGNE
Ga0207695_1008607653300025913Corn RhizosphereMTPPPRSPFWRVLQLVAGIALFLYALRLLSPMPGDRTGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE
Ga0207657_1030668633300025919Corn RhizosphereMTTLVPAKPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVAMLDKMHKKGNE
Ga0207694_1127487023300025924Corn RhizosphereMTTLVPEASPRSPFWRVVQFVAGGALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFDKMQKRRDE
Ga0207687_1107531723300025927Miscanthus RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE
Ga0207690_1183498123300025932Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIG
Ga0207709_1074163523300025935Miscanthus RhizosphereMNALVPQSPPRSPFWRVLQLIAGVALFLYALRLLSPMPDDRAGFILLVAILAAGSMALTDSIVGVLLAALDKMQKKGNE
Ga0207709_1106780423300025935Miscanthus RhizosphereMTALVPEASPRSPFWRVVQFVAGVALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFDKMQKRRDE
Ga0207689_1093472913300025942Miscanthus RhizosphereMTTPPRSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQK
Ga0207661_1152148223300025944Corn RhizosphereGMTTPPRSPFWRVLQLIAGIALFLYALRLLSPMPGDRTGFILLVAILAAGSMALTDSIIGLVVAGLDKMHKKGNE
Ga0207667_10002877113300025949Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVATLDKMHKKGNE
Ga0207683_1092922123300026121Miscanthus RhizosphereMTTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIVGLLVATLDKMHKKGNE
Ga0207698_1171998333300026142Corn RhizosphereMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILQVAILAAGSMALADSIIGLLVATLD
Ga0207698_1226688323300026142Corn RhizosphereSPFWRVLQLIVGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLIVAGLDKMQKKGNE
Ga0302151_1006817423300028562BogMMTLVPDSPPAAARSPFWRVVQLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0265334_1008353223300028573RhizosphereMMALLPGSPPAAPRSAFWRVLQVIAGVALFLYALRLLSPMPFERAGFVLIAALLAAGSMALTDAVVGLIASIFENLQKGGKQ
Ga0265336_10000011743300028666RhizosphereMMALLPGSPPSAPPRSAFWRVLQVIAGVALFLYALRLLAPMPFDRVGFVLIAALLAAGAMALTDSLVGLIAAVFENMQKGGKQ
Ga0302198_1006243333300028765BogMMTLVPDSSPAAARSPFWRVVQLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0302279_10001810133300028783BogMMTLVPESPAAAPRSPFWRVLQVIAGVALFLYALRLLSPMPFDRAGFVLIAALLAAGSMALTDAIVGLMASVFEKLHDKGDRP
Ga0302279_1036269623300028783BogPAAVRSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0302157_1021754613300028813BogMMTLVPDSPPAAVRSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFE
Ga0302157_1025803323300028813BogMMTLVPDSPPAAARSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESMQKGGKQ
Ga0302157_1058846413300028813BogTQGREAMMTLVPDSSPAAARSPFWRVVQLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0302259_119368523300028861FenMMTLVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFIVIAALLAAGSMAVSDSVVG
Ga0302154_1013027513300028882BogAARSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESMQKGGKQ
Ga0311371_1001889233300029951PalsaMMAIEPPPGAQRSAFWRVVQLVAGVALFLYALRLLSPMPSDPLGFILLVALLAAGSMGLADSVVGLVASLFEKMQKGGKQ
Ga0311371_1052625933300029951PalsaMMAVVDDTPAARSPFWRVVKLVAGVALFLCALRLLPPMPLERGAFVLIAALLAAGAMAVSDSVVGMLANVFETLQKGR
Ga0311331_1060640323300029954BogMMALVPDSPPAAARSPFWRVVQLVAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFERMQKGGKQ
Ga0311332_1087384223300029984FenMMTLVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGSMALSDSAVGVIASVFENLQKGGKQ
Ga0311334_1013352423300029987FenMMAVVDEAPLARSPFWRVVQLVAGVALFLCALRMLPPMPLERAGFVLIAALLAAGAMAVSDSAVGIVATVFENLHKGRKS
Ga0311334_1075317523300029987FenMMALVPDSAPPVAARSPFWRVLQLIVGASLFLYALRLLPPMPQERVGFVVIAALLAAGAMALSDSVVSLVATVFENLQKGGRQ
Ga0311334_1180488223300029987FenMMTLVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFIVIAALLAAGSMAVSDSVVGLIASVFE
Ga0311334_1192501923300029987FenMMTLVPEPSPPPVRSPFWRVLQLIVGAALFLYALRLLPPMPLERIGFVVIAALLAAGSMALSDSVIGLIATAFENLQKGGKQ
Ga0311337_1111646823300030000FenMMTLVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFIVIAALLAAGSMALTDTAVGVIASVFENLQNGGKQ
Ga0311350_1069686223300030002FenMMTLVPEAPASVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGSMALSDSAVGVIASVFENLQKGGKQ
Ga0311333_1054766823300030114FenMMTLVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGAMALSDSVVSLVATVFENLQKGGRQ
Ga0302196_1002261373300030225BogMMTLVPDSPPAAVRSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESMQKGGKQ
Ga0311349_1071936023300030294FenMMTLVPETPPPVRSPFWRVVQLVAGAALFLYALRLLPPMPLERVGFVVIAALLAAGSMALSDSVVGLLATVFENLQKGGKQ
Ga0311349_1107397623300030294FenSPFWRVLQLIVGASLFLYALRLLPPMPQERVGFVVIAALLAAGAMALSDSVVSLVATVFENLQKGGRQ
Ga0311349_1167995623300030294FenVPEAPAPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGSMALSDSAVGVIASVFENLQKGGKQ
Ga0311372_1002483623300030520PalsaMMTLVPDSPPAAVRSPFWRVVQLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0311372_1025669613300030520PalsaMMAVADDAPAARSPFWRVVQLVAGVALFLCALRLLPPMPLERGAFVLIAALLAAGAMAVSDSVVGMLANVFETLQKGR
Ga0311372_1203168723300030520PalsaMSMLVPETPPRSPFWRVVTLVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLIAAVFEKTQKRDNE
Ga0307511_1042838613300030521EctomycorrhizaMTTLVPEAPPRSPFWRVLQLVAGIALFLYALRLLSPMPGDRAGFILLVALLAAGSMALTDSIVGVLVAVFEKMQKRRGE
Ga0311345_1038658723300030688BogMMTLVPDSPPAAVRSPFWRVVKLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0302312_1022477413300030746PalsaPDSPPAAVRSPFWRVVQLIAGVALFLYALRLLAPMPFDRFGFVLIAALLAAGSMAVADSVVGLIASVFESLQKGGKQ
Ga0302323_10041182923300031232FenMMLLVPDPAPPVAARSPFWRVLQLVVGASLFLYALRLLPPMPQERIGFAVIAALLAAGAMALSDSVVGLVATLFENLQKGGHQ
Ga0302323_10113262523300031232FenMMAVVDDAPLARSPFWRVVQLVVGVALFLYALRMLPPMPLERAGFVLIAALLAAGAMAVSDSAVGLMATVFENLQKGRRS
Ga0302323_10223728523300031232FenMMTLAPESPPVLRSPFWRVLQLVAGAALFLYALRLLPPMPLERVGFVVIAALLAAGAMALSDSVVGLLATVFENLQKGGKQ
Ga0318555_1049763513300031640SoilMTTLVPQTPPRSAFWRVVQFVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0310813_1025606223300031716SoilSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVAALDKMHKKGNE
Ga0311351_1042244923300031722FenMMTLVPEAPTPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGSMALSDSAVGVIASVFENLQKGGKQ
Ga0307516_1000397073300031730EctomycorrhizaMMTLVPEPSPPPVRSPFWRVLQLIAGAALFLYALRLLPPMPLERIGFIVIAALLAAGSMAVSDSVIGLIATVFENLQKGGKQ
Ga0318501_1017726823300031736SoilGREGMTTLVPQTPPRSAFWRVVQFVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0318554_1053859323300031765SoilMTTLVPETPPRSAFWRVVQFVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0302322_10043069823300031902FenMMALVSDSAPPVAARSPFWRVLQLIVGASLFLYALRLLPPMPQERVGFVVIAALLAAGAMALSDSVVSLVATVFENLQKGGRQ
Ga0306921_1012537933300031912SoilMTDATVSTTGRGPFWRVLQLVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0311367_1132918823300031918FenMMTLVPEAPTPVRSPFWRVLQLIAGAALFLYALRLLPPMPYERVGFVVIAALLAAGSMALSDSAVGVIASFFENLQKGGKQ
Ga0308175_10085663023300031938SoilMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRSGFILLVAILAAGSMALADSIIGLLVATLDKMHKKGNE
Ga0308174_1183612713300031939SoilGMTRLVPETAPRNPFWRVVQLVAGVALFLYALRLLSPMPDDRAGFILLVALLAAGAMALADSVVGLVVAAIDKIQRRGIE
Ga0308176_1067198513300031996SoilMTTLVPDTPPRSPLWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVATLDKMHKKGNE
Ga0308176_1205454423300031996SoilMMTLVPESPSPARSPFWRVLQLIAGAALFLYALRLLPPMPLERVGFVVIAGLLAAGSMALSDSIVGLVAALFANLQKGDKQ
Ga0318510_1023071213300032064SoilMTTLVPQTPPRSAFWRVVQFVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNERASTSLRCC
Ga0318513_1007005833300032065SoilMTTLVPQTPPRSAFWRVVQFVAGVALFLYAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0318514_1020015523300032066SoilTRRSAFWRVVQFVAGVALFLYALRLVAPMPNDRAGFILLVAVLAAGSMALTDSIVGLILAVFDKMQKKGNE
Ga0308173_1185963923300032074SoilMTRLVPETAPRNPFWRVVQLVAGVALFLYALRLLSPMPDDRAGFILLVALLAAGAMALADSVVGLVVAAIDKIQRRG
Ga0308173_1221330123300032074SoilMTTLVPDTPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALTDSIIGLLVATLDKMHKKGNE
Ga0318519_1042918813300033290SoilMTTLVPETPPRSPFWRVLQLVGGVALFLYALRLLSPMPGDRSGFILLVAILAAGSMALSDSIVGLLVAVLDKMQKKGNE
Ga0370487_0000138_13879_141213300034170Untreated Peat SoilMMAVIDDAPPARSAFWRVVQLVAGVTLFLYALRVLPPMPFERVGFVLIAALLAAGAMAVSDSAVGIAAAFFENLQKGRRS
Ga0373959_0030324_810_10493300034820Rhizosphere SoilMTTLVPATPPRSPFWRVLQLIAGVALFLYALRLLSPMPGDRAGFILLVAILAAGSMALADSIIGLLVAALDKMHKKGNE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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