Metagenome / Metatranscriptome Family F088355

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	43 residues
Representative Sequence	MKNLTNKLNVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR
Number of Associated Samples	49
Number of Associated Scaffolds	66

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.57 %
% of genes near scaffold ends (potentially truncated)	14.68 %
% of genes from short scaffolds (< 2000 bps)	61.47 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (26.605 % of family members)
Environment Ontology (ENVO)	Unclassified (86.239 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (45.872 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.66% β-sheet: 0.00% Coil/Unstructured: 56.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 66 Family Scaffolds
PF03321	GH3	9.09
PF01656	CbiA	4.55
PF13529	Peptidase_C39_2	3.03
PF07690	MFS_1	3.03
PF04020	Phage_holin_4_2	3.03
PF13614	AAA_31	1.52
PF17137	DUF5110	1.52
PF00155	Aminotran_1_2	1.52
PF01168	Ala_racemase_N	1.52
PF00578	AhpC-TSA	1.52
PF00950	ABC-3	1.52
PF00005	ABC_tran	1.52

COG ID	Name	Functional Category	% Frequency in 66 Family Scaffolds
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	3.03
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	1.52
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	1.52
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	1.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.07 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	88.07 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	82.57 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	76.15 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	76.15 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Anaerolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea	2.75 %
Unclassified	root	N/A	2.75 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Anaerolinea thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	2.75 %
Unclassified	root	N/A	2.75 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0418221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	589	Open in IMG/M
3300000032\|Draft_c0418221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	589	Open in IMG/M
3300000504\|M940CN_1000151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	4456	Open in IMG/M
3300000504\|M940CN_1007716	Not Available	666	Open in IMG/M
3300000504\|M940CN_1007716	Not Available	666	Open in IMG/M
3300000504\|M940CN_1007716	Not Available	666	Open in IMG/M
3300000568\|Draft_10017066	All Organisms → cellular organisms → Bacteria	55279	Open in IMG/M
3300000568\|Draft_10763238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	843	Open in IMG/M
3300001567\|Draft_10156084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	600	Open in IMG/M
3300001567\|Draft_10156084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	600	Open in IMG/M
3300002498\|TOLCLC_10050218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6133	Open in IMG/M
3300002498\|TOLCLC_10050218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6133	Open in IMG/M
3300002703\|draft_11081691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6873	Open in IMG/M
3300002703\|draft_11081691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6873	Open in IMG/M
3300002703\|draft_11081691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6873	Open in IMG/M
3300002821\|Iso3TCLC_10055216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1148	Open in IMG/M
3300002821\|Iso3TCLC_10055216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1148	Open in IMG/M
3300002821\|Iso3TCLC_10055216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1148	Open in IMG/M
3300002821\|Iso3TCLC_10078845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1153	Open in IMG/M
3300002821\|Iso3TCLC_10078845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1153	Open in IMG/M
3300005144\|Ga0068711_1000115	All Organisms → cellular organisms → Bacteria	102628	Open in IMG/M
3300005144\|Ga0068711_1007127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	4263	Open in IMG/M
3300005144\|Ga0068711_1011307	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300005144\|Ga0068711_1045072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1027	Open in IMG/M
3300005144\|Ga0068711_1045072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1027	Open in IMG/M
3300005144\|Ga0068711_1045072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1027	Open in IMG/M
3300005145\|Ga0068713_1000353	All Organisms → cellular organisms → Bacteria	86311	Open in IMG/M
3300005325\|Ga0074199_1058488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	818	Open in IMG/M
3300005325\|Ga0074199_1078691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	651	Open in IMG/M
3300005325\|Ga0074199_1078691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	651	Open in IMG/M
3300006965\|Ga0102601_105195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	758	Open in IMG/M
3300006967\|Ga0102599_111308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	508	Open in IMG/M
3300007351\|Ga0104751_1029438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	3212	Open in IMG/M
3300009566\|Ga0130025_1164618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1461	Open in IMG/M
3300009707\|Ga0116195_1001551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	13547	Open in IMG/M
3300009707\|Ga0116195_1001551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	13547	Open in IMG/M
3300009707\|Ga0116195_1001551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	13547	Open in IMG/M
3300009707\|Ga0116195_1001551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	13547	Open in IMG/M
3300009707\|Ga0116195_1100776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	561	Open in IMG/M
3300009707\|Ga0116195_1100776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	561	Open in IMG/M
3300009708\|Ga0116194_1029923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1577	Open in IMG/M
3300009775\|Ga0116164_10431229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	541	Open in IMG/M
3300009778\|Ga0116151_10490422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	548	Open in IMG/M
3300010235\|Ga0136247_10000265	All Organisms → cellular organisms → Bacteria	25361	Open in IMG/M
3300010235\|Ga0136247_10001233	All Organisms → cellular organisms → Bacteria	8298	Open in IMG/M
3300010344\|Ga0116243_10700666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	598	Open in IMG/M
3300010346\|Ga0116239_10057782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3562	Open in IMG/M
3300010346\|Ga0116239_10917722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	542	Open in IMG/M
3300010348\|Ga0116255_10453062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	854	Open in IMG/M
3300010348\|Ga0116255_10453062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	854	Open in IMG/M
3300010349\|Ga0116240_10760152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	627	Open in IMG/M
3300010350\|Ga0116244_10991656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	535	Open in IMG/M
3300010411\|Ga0136993_10113796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	518	Open in IMG/M
3300014205\|Ga0172380_10077526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2737	Open in IMG/M
3300014205\|Ga0172380_10077526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2737	Open in IMG/M
3300014656\|Ga0180007_10098069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1965	Open in IMG/M
3300019861\|Ga0206388_1159920	All Organisms → cellular organisms → Bacteria	27880	Open in IMG/M
3300019861\|Ga0206388_1159920	All Organisms → cellular organisms → Bacteria	27880	Open in IMG/M
3300019861\|Ga0206388_1159920	All Organisms → cellular organisms → Bacteria	27880	Open in IMG/M
3300021603\|Ga0226659_10524934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	504	Open in IMG/M
3300022177\|Ga0228536_1014298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1805	Open in IMG/M
3300022177\|Ga0228536_1014298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1805	Open in IMG/M
3300022177\|Ga0228536_1018358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1496	Open in IMG/M
3300022181\|Ga0228535_1000282	All Organisms → cellular organisms → Bacteria	163991	Open in IMG/M
3300025393\|Ga0208041_1004189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	5648	Open in IMG/M
3300025393\|Ga0208041_1004189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	5648	Open in IMG/M
3300025393\|Ga0208041_1004189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	5648	Open in IMG/M
3300025408\|Ga0208462_1031795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1021	Open in IMG/M
3300025408\|Ga0208462_1031795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1021	Open in IMG/M
3300026385\|Ga0232081_103924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2269	Open in IMG/M
3300026385\|Ga0232081_103924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2269	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027051\|Ga0209269_1008979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2858	Open in IMG/M
3300027640\|Ga0209347_1120097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	733	Open in IMG/M
3300027640\|Ga0209347_1120097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	733	Open in IMG/M
3300027958\|Ga0209749_1090629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	913	Open in IMG/M
3300027958\|Ga0209749_1090629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	913	Open in IMG/M
3300027958\|Ga0209749_1090629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	913	Open in IMG/M
3300027958\|Ga0209749_1193652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	545	Open in IMG/M
3300027958\|Ga0209749_1193652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	545	Open in IMG/M
3300028168\|Ga0268277_1053890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1128	Open in IMG/M
3300028168\|Ga0268277_1135733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	616	Open in IMG/M
3300028168\|Ga0268277_1135733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	616	Open in IMG/M
3300028730\|Ga0307363_1012240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1553	Open in IMG/M
3300028730\|Ga0307363_1012240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1553	Open in IMG/M
3300028730\|Ga0307363_1039054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	663	Open in IMG/M
3300028760\|Ga0307362_104590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2487	Open in IMG/M
3300028760\|Ga0307362_104590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2487	Open in IMG/M
3300028760\|Ga0307362_104590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2487	Open in IMG/M
3300028760\|Ga0307362_104590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2487	Open in IMG/M
3300028760\|Ga0307362_116417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1057	Open in IMG/M
3300028883\|Ga0272443_10289425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	785	Open in IMG/M
3300028883\|Ga0272443_10289425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	785	Open in IMG/M
3300028903\|Ga0302250_1017497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1709	Open in IMG/M
3300028903\|Ga0302250_1022079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1370	Open in IMG/M
3300028903\|Ga0302250_1022079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1370	Open in IMG/M
3300028916\|Ga0310376_1096356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	500	Open in IMG/M
3300028920\|Ga0272441_10674732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	815	Open in IMG/M
3300029799\|Ga0311022_15040032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	576	Open in IMG/M
3300029826\|Ga0134619_1140272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	525	Open in IMG/M
3300031111\|Ga0272444_11042590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	564	Open in IMG/M
3300033169\|Ga0334887_1053252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1484	Open in IMG/M
3300033817\|Ga0373875_000145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	141234	Open in IMG/M
3300033817\|Ga0373875_000145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	141234	Open in IMG/M
3300033817\|Ga0373875_025759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	79.82%
Environmental	Environmental	20.18%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	37.61%
Lab Enrichment	Engineered → Lab Enrichment	22.02%
Aquatic	Environmental → Aquatic	12.84%
Bioremediation	Engineered → Bioremediation	10.09%
Terrestrial	Environmental → Terrestrial	7.34%
Modeled	Engineered → Modeled	5.50%
Bioreactor	Engineered → Bioreactor	2.75%
Solid Waste	Engineered → Solid Waste	1.83%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	29.36%
Defined Media	Engineered → Lab Enrichment → Defined Media	22.02%
Marine	Environmental → Aquatic → Marine	8.26%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	8.26%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	7.34%
Simulated Communities (Microbial Mixture)	Engineered → Modeled → Simulated Communities (Microbial Mixture)	5.50%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.67%
Oil Reservoir	Environmental → Terrestrial → Oil Reservoir	3.67%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.75%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.75%
Persistent Organic Pollutants (Pop)	Engineered → Bioremediation → Persistent Organic Pollutants (Pop)	2.75%
Landfill	Engineered → Solid Waste → Landfill	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Unclassified	Environmental → Aquatic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	29.36%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	18.35%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	8.26%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	7.34%
Unclassified	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified	5.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.67%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified	3.67%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified	3.67%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.75%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.75%
Unclassified	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified	2.75%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	1.83%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	1.83%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	29.36%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	18.35%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	8.26%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	7.34%
Unclassified	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified	5.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.67%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.67%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified	3.67%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.75%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.75%
Unclassified	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	1.83%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	26.61%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	11.93%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	8.26%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	7.34%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	6.42%
Defined Medium	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified → Defined Medium	5.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.67%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	3.67%
Anaerobic Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Anaerobic Enrichment Culture	3.67%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.75%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	2.75%
Anaerobic Enrichment Culture	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified → Unclassified → Anaerobic Enrichment Culture	2.75%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	1.83%
Oil Sands	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands	1.83%
Produced Fluid	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Produced Fluid	1.83%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.92%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.92%
Aquatic	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Aquatic	0.92%
Deep Subsurface Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer	0.92%
Aquifer Solids	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Aquifer Solids	0.92%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.92%
Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Sludge	0.92%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000504	Microbial Communities from Little Sippewissett Salt Marsh, Woods Hole, MA that are anoxygenic and photosynthetic, Marine photosynthetic community that grows at 940nm	Environmental	Open in IMG/M
3300000568	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300001567	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300002498	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300002703	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5	Engineered	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300005145	Enrichment culture microbial communities om Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS2 (Arthur Kill Sulfidogenic replicate 2) MetaG	Engineered	Open in IMG/M
3300005325	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47	Engineered	Open in IMG/M
3300006965	T0 (3) T34 (live) enrichments of Methanogenic microbial communities using Athabascan oil sands	Environmental	Open in IMG/M
3300006967	T0 (1) T34 (live) enrichments of Methanogenic microbial communities using Athabascan oil sands	Environmental	Open in IMG/M
3300007351	Combined Assembly of Gp0115775, Gp0115815	Environmental	Open in IMG/M
3300009566	Methanogenic o-xylene degrading microbial communities from aquifer solids in Pensacola, Florida - enrichment culture X8-AB	Environmental	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG	Engineered	Open in IMG/M
3300009775	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG	Engineered	Open in IMG/M
3300009778	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC117_MetaG	Engineered	Open in IMG/M
3300010235	Terrestrial oil reservoir microbial community from Schrader Bluff Formation, Alaska - SB2	Environmental	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010348	AD_HKYLca	Engineered	Open in IMG/M
3300010349	AD_HKTAca	Engineered	Open in IMG/M
3300010350	AD_HKSTca	Engineered	Open in IMG/M
3300010411	Aquatic microbial communities from North Sea petroleum storage tank - Cell3b	Environmental	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300019861	Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA - DGG1A 1	Engineered	Open in IMG/M
3300021603	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spades	Engineered	Open in IMG/M
3300022177	Enriched culture of PCE-dechlorinating microbial communities from Ithaca, New York, USA - SJ1.S	Engineered	Open in IMG/M
3300022181	Enriched culture of PCE-dechlorinating microbial communities from Ithaca, New York, USA - SJ1	Engineered	Open in IMG/M
3300025393	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025408	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026385	Metatranscriptome of enriched culture of PCE-dechlorinating microbial communities from Ithaca, New York, USA - SJ1.36 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027958	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47 (SPAdes)	Engineered	Open in IMG/M
3300028168	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_50m	Environmental	Open in IMG/M
3300028730	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_RA_Asp2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300028760	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_RA_Asp1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300028883	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Acet-12	Environmental	Open in IMG/M
3300028903	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_RA_Asp	Engineered	Open in IMG/M
3300028916	Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA. Combined Assembly of Gp0220779, Gp0324998	Engineered	Open in IMG/M
3300028920	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6N	Environmental	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300029826	Marine sediment microbial communities from Jimmy Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - N0247	Environmental	Open in IMG/M
3300031111	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-13	Environmental	Open in IMG/M
3300033169	Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands - Granular Sludge_18_07-R1	Engineered	Open in IMG/M
3300033817	Laboratory-enriched microbial communities from a contaminated site in Ontario, Canada - KB1_TCB MSP	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_04182211	3300000032	Hydrocarbon Resource Environments	MKNLTTKLNLFAGQKGQLILAILTIALFVLAAGAPNATIGIGR*
Draft_04182213	3300000032	Hydrocarbon Resource Environments	MKNLTTKLNLFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
M940CN_10001518	3300000504	Salt Marsh	MKNLSNKISVFAGKKGQLILAILTIALFVLAAGAPNATLGIGR*
M940CN_10077162	3300000504	Salt Marsh	MKNLTNKISVFVGRKGQLVLAILTIAIFVLAAGAPNATLGIGR*
M940CN_10077163	3300000504	Salt Marsh	MKNLSNKISVFVGRKGQLVLAILTIALFVLAAGAPNATLGIGR*
M940CN_10077164	3300000504	Salt Marsh	MKNLTNKISVFAGKKGQLVIAILTIALFVLAAGAPNATLGIGR*
Draft_1001706673	3300000568	Hydrocarbon Resource Environments	MKNLTNKINIFAGQKGQLVLVILTIALFVLAAGAPNATIGIGR*
Draft_107632382	3300000568	Hydrocarbon Resource Environments	MKNLTNKINIFAGQKGQLVIAILTIALFVLAAGAPNATIGIGR*
Draft_101560842	3300001567	Hydrocarbon Resource Environments	MKNLTNKISVLAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
Draft_101560843	3300001567	Hydrocarbon Resource Environments	MKNLPNKLNIFAGQKGQLILAILTIALFVLAAGAPNATIGIGR*
TOLCLC_1005021811	3300002498	Hydrocarbon Resource Environments	MKNLSNKLNVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
TOLCLC_100502187	3300002498	Hydrocarbon Resource Environments	MKNITNKISVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
draft_1108169111	3300002703	Hydrocarbon Resource Environments	MKNLTNKLNVFAGQKGQLVLAILTIALFVLAAGAPNATLGIGR*
draft_110816918	3300002703	Hydrocarbon Resource Environments	MKNLTNKLSVFAGQKGQLIFAILTIALFVLAAGAPNATLGIGR*
draft_110816919	3300002703	Hydrocarbon Resource Environments	MKNITTKLSVFAGQKGQLVLAILAIALFVLAAGAPNATLGIGR*
Iso3TCLC_100552161	3300002821	Hydrocarbon Resource Environments	MKNLSNKLNVFAGQKGQLVVAILTIALFVLVAGAPNATIGIGR*
Iso3TCLC_100552162	3300002821	Hydrocarbon Resource Environments	MKNLTNKISVLAGQKGQLVVAILTIALFVLVAGAPNATIGIGR*
Iso3TCLC_100552165	3300002821	Hydrocarbon Resource Environments	MKNLISKINLFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
Iso3TCLC_100788451	3300002821	Hydrocarbon Resource Environments	MKDIKNKVSVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Iso3TCLC_100788453	3300002821	Hydrocarbon Resource Environments	MKNIKNKVSVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0068711_100011568	3300005144	Enrichment Culture	MKDIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR*
Ga0068711_10071272	3300005144	Enrichment Culture	MKNLTNKISVFAGRKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0068711_10113072	3300005144	Enrichment Culture	MKNMTNKIGVLVGRKGQLILAILTIALFVLAAGAPNATLGIGR*
Ga0068711_10450723	3300005144	Enrichment Culture	MKNLTNKVSVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0068711_10450724	3300005144	Enrichment Culture	MKNLNNKISVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0068711_10450725	3300005144	Enrichment Culture	MKNLSNKINVFVGRKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0068713_100035387	3300005145	Enrichment Culture	LEKQLSGEKIMKNIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR*
Ga0074199_10584883	3300005325	Bioremediated Contaminated Groundwater	MKDIKNKVGVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0074199_10786911	3300005325	Bioremediated Contaminated Groundwater	MKNLTNKLNVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0074199_10786913	3300005325	Bioremediated Contaminated Groundwater	MKNLSNKLNIFAGQKGQLVLAILVIALFVLAAGAPNATIGIGR*
Ga0102601_1051952	3300006965	Oil Sands	MKNIKNKISVFAGQKGQLVLAILTIALFVLAAGAPYATIGVGR*
Ga0102599_1113081	3300006967	Oil Sands	LNKSLSTLGEKIMKNIKNKISVFAGQKGQLVLAILTIALFVLAAGAPNATIGVGR*
Ga0104751_10294384	3300007351	Deep Subsurface Aquifer	MKNIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR*
Ga0130025_11646181	3300009566	Aquifer Solids	LTTKLNLFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0116195_100155110	3300009707	Anaerobic Digestor Sludge	MKNLTNKANLFVGDKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0116195_100155112	3300009707	Anaerobic Digestor Sludge	MKNTINNIRLFASHKGQLVLAILTIALFVLAAGAPNATLGIGR*
Ga0116195_100155113	3300009707	Anaerobic Digestor Sludge	MKSIINKINLFASHKGQLILAILTIALFVLAAGAPNATLGIGR*
Ga0116195_100155114	3300009707	Anaerobic Digestor Sludge	MKNTISLFVGRKGQLILAILTIALFVLAAGAPNATLGIGR*
Ga0116195_11007761	3300009707	Anaerobic Digestor Sludge	IKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR*
Ga0116195_11007763	3300009707	Anaerobic Digestor Sludge	MKNIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGI
Ga0116194_10299235	3300009708	Anaerobic Digestor Sludge	MKNIKNKLSVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0116164_104312291	3300009775	Anaerobic Digestor Sludge	QRRNQIMKNLTNKISTFAGQKGQLLLVILSIALFVLAAGAPNDTIGIGR*
Ga0116151_104904222	3300009778	Anaerobic Digestor Sludge	MKNLTNKISTFAGQKGQLLLVILSIALFVLAAGAPNSTIGIGR*
Ga0136247_1000026528	3300010235	Produced Fluid	MKNLTNKISIFAGQKGQLLLVILTIAMFVLAAGAPNSTVGIGR*
Ga0136247_1000123311	3300010235	Produced Fluid	MKNLTTKLNLFAGQKGQLVLAILTIALFVLAAGAPN
Ga0116243_107006663	3300010344	Anaerobic Digestor Sludge	MKHLTHKINLFVAILTIALFVLAAGAPNATIGIGR*
Ga0116239_100577826	3300010346	Anaerobic Digestor Sludge	MKHLITKISSFATTKGKLVLAILTIALFALAAGAPNATIGIGR*
Ga0116239_109177222	3300010346	Anaerobic Digestor Sludge	MKKLTSKINLLIAILTIALFVLAAGAPNATIGIGR*
Ga0116255_104530622	3300010348	Anaerobic Digestor Sludge	MKNLISKISLFVDKKSQLILVILTITLFVLAAGAPNATLGIGR*
Ga0116255_104530623	3300010348	Anaerobic Digestor Sludge	MKNLTNQINLFVSKKGQLILAILIIALFVLAAGAPNATLGIGR*
Ga0116240_107601523	3300010349	Anaerobic Digestor Sludge	IYQRRNQIMKNLTNKISTFAGQKGQLLLVILSIALFVLAAGAPNSTIGIGR*
Ga0116244_109916562	3300010350	Anaerobic Digestor Sludge	MKNLTNKISTFVGQKGQLLLVILSIALFVLAAGAPNDTVGIGR*
Ga0136993_101137962	3300010411	Aquatic	MKNKLSIFAGEKGQLILAILTIALFVLAAGAPNALGSVGR*
Ga0172380_100775263	3300014205	Landfill Leachate	MKNLTNKINIFAGQKGQLVLAILVIALFVLAAGAPNATIGIGR*
Ga0172380_100775265	3300014205	Landfill Leachate	MKNLTTKLNVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR*
Ga0180007_100980695	3300014656	Groundwater	MKNLTNKISTFAGQKGQLVLVILSVALFVLAAGAPNSTIGIGR*
Ga0206388_115992020	3300019861	Anaerobic Enrichment Culture	MKNLTNKLSVFAGQKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0206388_115992021	3300019861	Anaerobic Enrichment Culture	MKNITTKLSVFAGQKGQLVLAILAIALFVLAAGAPNATLGIGR
Ga0206388_115992023	3300019861	Anaerobic Enrichment Culture	MKNLTNKLSVFAGQKGQFILTILTIALFVLAAGAPNATLGIGR
Ga0226659_105249341	3300021603	Granular Sludge	IMKNIKNKLSVFAGQKGQFVLAILTIALFVLAAGAPNATIGIGR
Ga0228536_10142983	3300022177	Defined Medium	MKNLTNKANLFASHKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0228536_10142985	3300022177	Defined Medium	MKNTINNIRLFASHKGQLVLAILTIALFVLAAGAPNATL
Ga0228536_10183583	3300022177	Defined Medium	MKNLTSKVSLFVSHKGQFVLAILAIALFVLAAGAPNATLGIGR
Ga0228535_100028234	3300022181	Defined Medium	MKNTINNIRLFASHKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0208041_10041894	3300025393	Anaerobic Digestor Sludge	MKNLTNKANLFVGDKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0208041_10041897	3300025393	Anaerobic Digestor Sludge	MKSIINKINLFASHKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0208041_10041898	3300025393	Anaerobic Digestor Sludge	MKNTISLFVGRKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0208462_10317952	3300025408	Anaerobic Digestor Sludge	MKDIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR
Ga0208462_10317954	3300025408	Anaerobic Digestor Sludge	MKNIKNKLSVFAGQKGQLVLAILTIVLFVLAAGAPNATIGIGR
Ga0232081_1039244	3300026385	Defined Medium	MKNTINLFVGRKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0232081_1039245	3300026385	Defined Medium	MKSTINKINLFASHKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0209269_100897910	3300027051	Enrichment Culture	MKNLTNKISVFAGRKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0209269_10089793	3300027051	Enrichment Culture	MKNMTNKIGVLVGRKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0209269_10089795	3300027051	Enrichment Culture	MKNLSNKISVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0209269_10089796	3300027051	Enrichment Culture	MKNLSNKINVFVGRKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0209269_10089797	3300027051	Enrichment Culture	MKNLNNKISVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0209269_10089798	3300027051	Enrichment Culture	MKNLTNKVSVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0209347_11200972	3300027640	Deep Subsurface	MKNLTTKLNIFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR
Ga0209347_11200973	3300027640	Deep Subsurface	MKNITTKLNVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR
Ga0209749_10906293	3300027958	Bioremediated Contaminated Groundwater	MKDIKNKVSVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR
Ga0209749_10906294	3300027958	Bioremediated Contaminated Groundwater	MKDIKNKVGVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR
Ga0209749_10906295	3300027958	Bioremediated Contaminated Groundwater	IKNKVSVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR
Ga0209749_11936521	3300027958	Bioremediated Contaminated Groundwater	MKNLTNKLNVFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR
Ga0209749_11936523	3300027958	Bioremediated Contaminated Groundwater	NVFAGQKGQLVLAILVIALFVLAAGAPNATIGIGR
Ga0268277_10538901	3300028168	Saline Water	MKNLSNKLSVFAGQKGQLVLAILIIALFVLAAGAPNATIGIGR
Ga0268277_11357332	3300028168	Saline Water	MKNLSNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR
Ga0268277_11357333	3300028168	Saline Water	MKNLSNKISVFAGQKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0307363_10122401	3300028730	Anaerobic Digestor Sludge	MKNLTNKINIFAGQKGQLVIAILTIALFVLAAGAPNATIGIGR
Ga0307363_10122403	3300028730	Anaerobic Digestor Sludge	MKNITNKISVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR
Ga0307363_10390543	3300028730	Anaerobic Digestor Sludge	MKSTINKIGVFASKKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0307362_10459010	3300028760	Anaerobic Digestor Sludge	MKNMTNKISVFIGRKGRFILAILTIALFVLAAGAPNATLGIGR
Ga0307362_1045906	3300028760	Anaerobic Digestor Sludge	MKNLTNKISVFVSKKGQLVIAILTIALFVLAAGAPNATLGIGR
Ga0307362_1045907	3300028760	Anaerobic Digestor Sludge	MKNLTNKISVFVGRKGQLILAILTIALFVLAAGAPNASLGIGR
Ga0307362_1045908	3300028760	Anaerobic Digestor Sludge	MKNLTNKISVFASKKGQLVLAILTIALFVLAAGAPNATLGIGR
Ga0307362_1164173	3300028760	Anaerobic Digestor Sludge	MKKLTSKINLLIAILTIALFVLAAGAPNATIGIGR
Ga0272443_102894253	3300028883	Marine Sediment	MKNLKNKLNVFASRKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0272443_102894254	3300028883	Marine Sediment	NVFAGSKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0302250_10174973	3300028903	Activated Sludge	MKNLTNKISVFVGRKGQLILAILTIALFVLAAGAPNATLGIGR
Ga0302250_10220795	3300028903	Activated Sludge	MKNLTNKINIFAGQKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0302250_10220797	3300028903	Activated Sludge	RRKIMKNITNKISVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR
Ga0310376_10963561	3300028916	Anaerobic Enrichment Culture	MKNLTTKLNLFAGQKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0272441_106747322	3300028920	Marine Sediment	MKNLKNKLNVFAGSKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0311022_150400322	3300029799	Anaerobic Digester Digestate	MKNIKNKLRVFAGQKGQFVLAILTIALFVLAAGAPNATIGIGR
Ga0134619_11402722	3300029826	Marine Sediment	MKNLTNKISTFVGQKGQLLLVILSIALFVLAAGAPNDTIGIGR
Ga0272444_110425901	3300031111	Marine Sediment	PKEIYIMKNLKNKLNVFASRKGQLILAILTIALFVLAAGAPNATIGIGR
Ga0334887_10532521	3300033169	Sludge	MKNIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR
Ga0373875_000145_138_245	3300033817	Anaerobic Enrichment Culture	MKKLTSKINLFVAILTIALFVLAAGAPNATIGIGR
Ga0373875_000145_543_650	3300033817	Anaerobic Enrichment Culture	MKHLTHKINLFVAILTIALFVLAAGAPNATIGIGR
Ga0373875_025759_356_487	3300033817	Anaerobic Enrichment Culture	MKNLTTKLNLFAGQKGQLVLAILTIALFVLAAGAPNATIGIGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088355

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences