Basic Information | |
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Family ID | F088833 |
Family Type | Metagenome |
Number of Sequences | 109 |
Average Sequence Length | 45 residues |
Representative Sequence | EKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Number of Associated Samples | 64 |
Number of Associated Scaffolds | 109 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 1.83 % |
% of genes near scaffold ends (potentially truncated) | 97.25 % |
% of genes from short scaffolds (< 2000 bps) | 86.24 % |
Associated GOLD sequencing projects | 59 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (69.725 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (56.881 % of family members) |
Environment Ontology (ENVO) | Unclassified (68.807 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (75.229 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 86.36% β-sheet: 0.00% Coil/Unstructured: 13.64% | Feature Viewer |
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Pfam ID | Name | % Frequency in 109 Family Scaffolds |
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PF04690 | YABBY | 8.26 |
PF00145 | DNA_methylase | 2.75 |
COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
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COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 2.75 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 69.72 % |
All Organisms | root | All Organisms | 30.28 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000116|DelMOSpr2010_c10016232 | Not Available | 3718 | Open in IMG/M |
3300000117|DelMOWin2010_c10025205 | All Organisms → Viruses | 3006 | Open in IMG/M |
3300003141|Ga0052246_1020745 | Not Available | 815 | Open in IMG/M |
3300004097|Ga0055584_101333152 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 747 | Open in IMG/M |
3300005078|Ga0070770_10223450 | Not Available | 851 | Open in IMG/M |
3300005086|Ga0072334_10428082 | Not Available | 549 | Open in IMG/M |
3300005086|Ga0072334_10674267 | Not Available | 500 | Open in IMG/M |
3300005086|Ga0072334_11007761 | Not Available | 500 | Open in IMG/M |
3300005086|Ga0072334_11149096 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium | 500 | Open in IMG/M |
3300005086|Ga0072334_11262192 | Not Available | 500 | Open in IMG/M |
3300005086|Ga0072334_11374936 | Not Available | 500 | Open in IMG/M |
3300005882|Ga0080455_1091307 | Not Available | 828 | Open in IMG/M |
3300005882|Ga0080455_1100148 | Not Available | 757 | Open in IMG/M |
3300005882|Ga0080455_1144698 | Not Available | 534 | Open in IMG/M |
3300006621|Ga0101441_117783 | Not Available | 3481 | Open in IMG/M |
3300006920|Ga0070748_1353673 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 518 | Open in IMG/M |
3300007896|Ga0111484_1005742 | All Organisms → Viruses | 2841 | Open in IMG/M |
3300007907|Ga0111546_122175 | Not Available | 514 | Open in IMG/M |
3300009361|Ga0116590_1000965 | All Organisms → Viruses | 3065 | Open in IMG/M |
3300009529|Ga0114919_10715503 | Not Available | 681 | Open in IMG/M |
3300009529|Ga0114919_10746437 | Not Available | 665 | Open in IMG/M |
3300009529|Ga0114919_10874319 | Not Available | 607 | Open in IMG/M |
3300009529|Ga0114919_11014632 | Not Available | 558 | Open in IMG/M |
3300009529|Ga0114919_11042080 | Not Available | 550 | Open in IMG/M |
3300009529|Ga0114919_11057277 | Not Available | 545 | Open in IMG/M |
3300010430|Ga0118733_102467474 | Not Available | 1029 | Open in IMG/M |
3300011118|Ga0114922_10265518 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 1438 | Open in IMG/M |
3300011118|Ga0114922_11076878 | Not Available | 651 | Open in IMG/M |
3300011128|Ga0151669_103874 | Not Available | 1160 | Open in IMG/M |
3300011129|Ga0151672_108765 | All Organisms → Viruses → Predicted Viral | 2776 | Open in IMG/M |
3300017709|Ga0181387_1020326 | Not Available | 1290 | Open in IMG/M |
3300017709|Ga0181387_1023811 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 1194 | Open in IMG/M |
3300017709|Ga0181387_1050612 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 827 | Open in IMG/M |
3300017709|Ga0181387_1133797 | Not Available | 512 | Open in IMG/M |
3300017710|Ga0181403_1037119 | Not Available | 1025 | Open in IMG/M |
3300017710|Ga0181403_1047902 | Not Available | 895 | Open in IMG/M |
3300017710|Ga0181403_1049461 | Not Available | 880 | Open in IMG/M |
3300017714|Ga0181412_1057126 | Not Available | 977 | Open in IMG/M |
3300017717|Ga0181404_1060407 | Not Available | 948 | Open in IMG/M |
3300017719|Ga0181390_1060409 | Not Available | 1089 | Open in IMG/M |
3300017720|Ga0181383_1142970 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 643 | Open in IMG/M |
3300017724|Ga0181388_1055189 | Not Available | 957 | Open in IMG/M |
3300017724|Ga0181388_1077096 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 795 | Open in IMG/M |
3300017725|Ga0181398_1015212 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 1938 | Open in IMG/M |
3300017726|Ga0181381_1035444 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 1113 | Open in IMG/M |
3300017733|Ga0181426_1050527 | Not Available | 821 | Open in IMG/M |
3300017742|Ga0181399_1006653 | Not Available | 3521 | Open in IMG/M |
3300017746|Ga0181389_1011504 | All Organisms → Viruses | 2908 | Open in IMG/M |
3300017748|Ga0181393_1025914 | All Organisms → Viruses | 1687 | Open in IMG/M |
3300017749|Ga0181392_1079300 | Not Available | 990 | Open in IMG/M |
3300017749|Ga0181392_1168638 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium | 638 | Open in IMG/M |
3300017749|Ga0181392_1238968 | Not Available | 513 | Open in IMG/M |
3300017751|Ga0187219_1192128 | Not Available | 568 | Open in IMG/M |
3300017752|Ga0181400_1087814 | Not Available | 923 | Open in IMG/M |
3300017752|Ga0181400_1118418 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 766 | Open in IMG/M |
3300017752|Ga0181400_1212288 | Not Available | 531 | Open in IMG/M |
3300017752|Ga0181400_1229148 | Not Available | 506 | Open in IMG/M |
3300017753|Ga0181407_1094366 | Not Available | 756 | Open in IMG/M |
3300017755|Ga0181411_1018944 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 2243 | Open in IMG/M |
3300017756|Ga0181382_1012736 | All Organisms → Viruses | 2802 | Open in IMG/M |
3300017757|Ga0181420_1068058 | Not Available | 1123 | Open in IMG/M |
3300017757|Ga0181420_1137739 | Not Available | 734 | Open in IMG/M |
3300017758|Ga0181409_1011198 | All Organisms → Viruses → Predicted Viral | 2984 | Open in IMG/M |
3300017758|Ga0181409_1191792 | Not Available | 591 | Open in IMG/M |
3300017764|Ga0181385_1194325 | Not Available | 613 | Open in IMG/M |
3300017764|Ga0181385_1266760 | Not Available | 512 | Open in IMG/M |
3300017765|Ga0181413_1061736 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 1155 | Open in IMG/M |
3300017765|Ga0181413_1082148 | Not Available | 985 | Open in IMG/M |
3300017765|Ga0181413_1154322 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 692 | Open in IMG/M |
3300017767|Ga0181406_1017617 | Not Available | 2277 | Open in IMG/M |
3300017767|Ga0181406_1113078 | Not Available | 820 | Open in IMG/M |
3300017769|Ga0187221_1076757 | Not Available | 1041 | Open in IMG/M |
3300017770|Ga0187217_1013403 | All Organisms → Viruses | 2981 | Open in IMG/M |
3300017770|Ga0187217_1111489 | Not Available | 927 | Open in IMG/M |
3300017770|Ga0187217_1142496 | Not Available | 805 | Open in IMG/M |
3300017772|Ga0181430_1184243 | Not Available | 599 | Open in IMG/M |
3300017773|Ga0181386_1121207 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 809 | Open in IMG/M |
3300017776|Ga0181394_1072218 | Not Available | 1132 | Open in IMG/M |
3300017776|Ga0181394_1099165 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium | 932 | Open in IMG/M |
3300017776|Ga0181394_1133163 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium | 780 | Open in IMG/M |
3300017776|Ga0181394_1138261 | Not Available | 762 | Open in IMG/M |
3300017776|Ga0181394_1261794 | Not Available | 516 | Open in IMG/M |
3300017779|Ga0181395_1075524 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 1091 | Open in IMG/M |
3300017781|Ga0181423_1069356 | Not Available | 1396 | Open in IMG/M |
3300017781|Ga0181423_1256492 | Not Available | 653 | Open in IMG/M |
3300017781|Ga0181423_1393951 | Not Available | 500 | Open in IMG/M |
3300017782|Ga0181380_1025970 | Not Available | 2164 | Open in IMG/M |
3300017782|Ga0181380_1118928 | Not Available | 909 | Open in IMG/M |
3300017782|Ga0181380_1118995 | Not Available | 909 | Open in IMG/M |
3300017786|Ga0181424_10150951 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 996 | Open in IMG/M |
3300017786|Ga0181424_10170800 | Not Available | 928 | Open in IMG/M |
3300017786|Ga0181424_10198892 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 849 | Open in IMG/M |
3300021365|Ga0206123_10113685 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium | 1276 | Open in IMG/M |
3300024433|Ga0209986_10434975 | Not Available | 591 | Open in IMG/M |
3300024433|Ga0209986_10530114 | Not Available | 514 | Open in IMG/M |
(restricted) 3300024517|Ga0255049_10043441 | Not Available | 2043 | Open in IMG/M |
(restricted) 3300024518|Ga0255048_10257630 | Not Available | 848 | Open in IMG/M |
(restricted) 3300024518|Ga0255048_10475847 | Not Available | 604 | Open in IMG/M |
(restricted) 3300024520|Ga0255047_10239339 | Not Available | 921 | Open in IMG/M |
3300025168|Ga0209337_1208299 | Not Available | 787 | Open in IMG/M |
3300025705|Ga0209374_1059154 | Not Available | 1321 | Open in IMG/M |
3300027790|Ga0209273_10268814 | Not Available | 699 | Open in IMG/M |
3300027820|Ga0209578_10353357 | Not Available | 676 | Open in IMG/M |
(restricted) 3300027856|Ga0255054_10276457 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 819 | Open in IMG/M |
(restricted) 3300027856|Ga0255054_10343789 | Not Available | 726 | Open in IMG/M |
(restricted) 3300027881|Ga0255055_10187938 | All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | 1126 | Open in IMG/M |
3300028125|Ga0256368_1015338 | Not Available | 1328 | Open in IMG/M |
3300031252|Ga0307494_1045197 | Not Available | 509 | Open in IMG/M |
3300032373|Ga0316204_10300260 | Not Available | 1245 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 56.88% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 9.17% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 6.42% |
Water | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water | 6.42% |
Marine Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment | 2.75% |
Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment | 2.75% |
Water | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water | 2.75% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 1.83% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 1.83% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.92% |
Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.92% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 0.92% |
Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.92% |
Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 0.92% |
Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 0.92% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.92% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.92% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.92% |
Marine Sediment | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment | 0.92% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
3300003141 | Marine sediment microbial communities from deep subseafloor of Shimokita Peninsula, Japan - 107 mbsf | Environmental | Open in IMG/M |
3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
3300005078 | Microbial Community from Halfdan Field MHBA5 | Environmental | Open in IMG/M |
3300005086 | Microbial Community from Halfdan Field MHDA3 | Environmental | Open in IMG/M |
3300005882 | Hydrocarbon microbial community from Halfdan Field MHF | Environmental | Open in IMG/M |
3300006621 | Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time point | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300007896 | Microbial communities from sediment of the River Tyne Estuary, UK ? Live_176d_3 | Environmental | Open in IMG/M |
3300007907 | Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_3 | Environmental | Open in IMG/M |
3300009361 | Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_3 SPAdes | Environmental | Open in IMG/M |
3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
3300010430 | Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples | Environmental | Open in IMG/M |
3300011118 | Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG | Environmental | Open in IMG/M |
3300011128 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02 | Environmental | Open in IMG/M |
3300011129 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02 | Environmental | Open in IMG/M |
3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
3300017717 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25 | Environmental | Open in IMG/M |
3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
3300017724 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17 | Environmental | Open in IMG/M |
3300017725 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29 | Environmental | Open in IMG/M |
3300017726 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 | Environmental | Open in IMG/M |
3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
3300017748 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21 | Environmental | Open in IMG/M |
3300017749 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 | Environmental | Open in IMG/M |
3300017751 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2) | Environmental | Open in IMG/M |
3300017752 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22 | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017755 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09 | Environmental | Open in IMG/M |
3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017758 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30 | Environmental | Open in IMG/M |
3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
3300017770 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2) | Environmental | Open in IMG/M |
3300017772 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10 | Environmental | Open in IMG/M |
3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017779 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16 | Environmental | Open in IMG/M |
3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
3300017786 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18 | Environmental | Open in IMG/M |
3300021365 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1 | Environmental | Open in IMG/M |
3300024433 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes) | Environmental | Open in IMG/M |
3300024517 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3 | Environmental | Open in IMG/M |
3300024518 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2 | Environmental | Open in IMG/M |
3300024520 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1 | Environmental | Open in IMG/M |
3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
3300025705 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes) | Environmental | Open in IMG/M |
3300027790 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes) | Environmental | Open in IMG/M |
3300027820 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes) | Environmental | Open in IMG/M |
3300027856 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23 | Environmental | Open in IMG/M |
3300027881 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27 | Environmental | Open in IMG/M |
3300028125 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB | Environmental | Open in IMG/M |
3300031252 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SW 0.2 | Environmental | Open in IMG/M |
3300032373 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSpr2010_100162321 | 3300000116 | Marine | ARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
DelMOWin2010_100252059 | 3300000117 | Marine | RAEKKEQKETSLEALMKFNVFLSIATLVTVAGATVADYILMAWTWL* |
Ga0052246_10207451 | 3300003141 | Marine Sediment | FAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGAAVADYVLMAWLWI* |
Ga0055584_1013331521 | 3300004097 | Pelagic Marine | MARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI* |
Ga0070770_102234501 | 3300005078 | Water | EWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0072334_104280821 | 3300005086 | Water | WLMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI* |
Ga0072334_106742672 | 3300005086 | Water | AKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0072334_110077612 | 3300005086 | Water | TKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMSWLWI* |
Ga0072334_111490961 | 3300005086 | Water | MARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0072334_112621922 | 3300005086 | Water | AEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0072334_113749361 | 3300005086 | Water | FAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0080455_10913073 | 3300005882 | Water | ESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0080455_11001481 | 3300005882 | Water | AKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0080455_11446981 | 3300005882 | Water | TSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0101441_1177837 | 3300006621 | Marine Surface Water | FATWLMERQEKKEAKETSLESLMKFNIFLSTLTLVSVAGATALDYAMIAWLWV* |
Ga0070748_13536732 | 3300006920 | Aqueous | EAKETSLESLMKFNVFLSIATLVSVAAATVADYVLMAWLWV* |
Ga0111484_10057421 | 3300007896 | Sediment | SLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0111546_1221751 | 3300007907 | Sediment | LESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0116590_10009651 | 3300009361 | Sediment | LMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI* |
Ga0114919_107155034 | 3300009529 | Deep Subsurface | AEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI* |
Ga0114919_107464371 | 3300009529 | Deep Subsurface | EAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0114919_108743193 | 3300009529 | Deep Subsurface | MARAEKKEAKETSLESLMKFNVFFSIATLVSVAGATVADYVLMAWLWI* |
Ga0114919_110146323 | 3300009529 | Deep Subsurface | LMDRAEKKEQKETSLESLMKFNVFLSIVTLVSVAGATVADYILMAYVWI* |
Ga0114919_110420801 | 3300009529 | Deep Subsurface | KKEAKETSLESLMKFNVFLSIATLVSVAGSTVADYVLMAWLWI* |
Ga0114919_110572771 | 3300009529 | Deep Subsurface | KKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI* |
Ga0118733_1024674741 | 3300010430 | Marine Sediment | KETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0114922_102655185 | 3300011118 | Deep Subsurface | AEWLMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI* |
Ga0114922_110768781 | 3300011118 | Deep Subsurface | AEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0151669_1038744 | 3300011128 | Marine | EAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI* |
Ga0151672_1087652 | 3300011129 | Marine | MANATAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV* |
Ga0181387_10203261 | 3300017709 | Seawater | RTAKFAERLMARQEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYILMAYVWL |
Ga0181387_10238114 | 3300017709 | Seawater | EWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181387_10506123 | 3300017709 | Seawater | MARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181387_11337972 | 3300017709 | Seawater | MARAEKKEQKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWL |
Ga0181403_10371194 | 3300017710 | Seawater | AEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMIAWLWI |
Ga0181403_10479024 | 3300017710 | Seawater | ARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181403_10494611 | 3300017710 | Seawater | SLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181412_10571261 | 3300017714 | Seawater | KETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI |
Ga0181404_10604071 | 3300017717 | Seawater | AKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181390_10604093 | 3300017719 | Seawater | AEKKEEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL |
Ga0181383_11429701 | 3300017720 | Seawater | TRFAEWLMARQEKKEAKETSLESLMKFNIFLSIATLVTVAGASVAEYVMMAYLWI |
Ga0181388_10551891 | 3300017724 | Seawater | ETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181388_10770961 | 3300017724 | Seawater | KFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181398_10152121 | 3300017725 | Seawater | LESLMKFNVFLSISTLVAVAGATVADYILMAYVWL |
Ga0181381_10354443 | 3300017726 | Seawater | KETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181426_10505271 | 3300017733 | Seawater | KDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181399_10066531 | 3300017742 | Seawater | KKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0181389_10115048 | 3300017746 | Seawater | AEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181393_10259141 | 3300017748 | Seawater | TSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181392_10793001 | 3300017749 | Seawater | SLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL |
Ga0181392_11686382 | 3300017749 | Seawater | KEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181392_12389682 | 3300017749 | Seawater | WLMARQEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0187219_11921281 | 3300017751 | Seawater | MARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0181400_10878144 | 3300017752 | Seawater | EAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0181400_11184181 | 3300017752 | Seawater | KKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181400_12122883 | 3300017752 | Seawater | WLMDRAEKKEEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL |
Ga0181400_12291481 | 3300017752 | Seawater | EEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL |
Ga0181407_10943661 | 3300017753 | Seawater | KFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181411_10189447 | 3300017755 | Seawater | MDRAEKKEQKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAYVWF |
Ga0181382_10127361 | 3300017756 | Seawater | KKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181420_10680581 | 3300017757 | Seawater | ETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWV |
Ga0181420_11377391 | 3300017757 | Seawater | KEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL |
Ga0181409_10111981 | 3300017758 | Seawater | TTKFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181409_11917921 | 3300017758 | Seawater | TSLESLMKFDIFLSIATLVTVAVVTVADYVMMAYLWI |
Ga0181385_11943252 | 3300017764 | Seawater | QEKKEAKETSLEGLMKFNIFLSIATLVTVAGATVADYVMMAYLWI |
Ga0181385_12667601 | 3300017764 | Seawater | KFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181413_10617366 | 3300017765 | Seawater | AKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0181413_10821481 | 3300017765 | Seawater | KEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI |
Ga0181413_11543223 | 3300017765 | Seawater | EWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0181406_10176171 | 3300017767 | Seawater | QEKKEEKETSLESLMKFNIFLSIATLVTVAGATVADYVMMAYLWI |
Ga0181406_11130781 | 3300017767 | Seawater | MTRQEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0187221_10767571 | 3300017769 | Seawater | QEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0187217_101340310 | 3300017770 | Seawater | KETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0187217_11114894 | 3300017770 | Seawater | AEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0187217_11424961 | 3300017770 | Seawater | KEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0181430_11842431 | 3300017772 | Seawater | EKKEEKETSLEGLMKFNIFLSIGTLVAVAGATVADYLMMAYLWI |
Ga0181386_11212071 | 3300017773 | Seawater | KETSLESLMKFNVFLSIATLVTVAGATIADYVLMAWLWI |
Ga0181394_10722184 | 3300017776 | Seawater | LMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWV |
Ga0181394_10991651 | 3300017776 | Seawater | MARAERKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI |
Ga0181394_11331633 | 3300017776 | Seawater | MARAEKKEDKETSLESLMKFNVFLSIATLVSVAGTTVADYILMAWLWI |
Ga0181394_11382611 | 3300017776 | Seawater | KKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYIMIAYTWL |
Ga0181394_12617942 | 3300017776 | Seawater | TSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181395_10755244 | 3300017779 | Seawater | AEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0181423_10693561 | 3300017781 | Seawater | TKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGTTVADYVLMAWLWV |
Ga0181423_12564921 | 3300017781 | Seawater | LMDRAEKKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYIMIAYTWL |
Ga0181423_13939511 | 3300017781 | Seawater | LMDRAEKKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL |
Ga0181380_10259707 | 3300017782 | Seawater | AEKKEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI |
Ga0181380_11189283 | 3300017782 | Seawater | LMERQEKKEAKETSLEALMKFNIFLSIGTLVAVAGSTAANYIMMAYTWL |
Ga0181380_11189953 | 3300017782 | Seawater | LMERQEKKEAKETSLEALMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL |
Ga0181424_101509513 | 3300017786 | Seawater | LESLMKFNVFLSIATLVTVAGATIADYVLMAWLWI |
Ga0181424_101708001 | 3300017786 | Seawater | KEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWV |
Ga0181424_101988921 | 3300017786 | Seawater | EAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0206123_101136855 | 3300021365 | Seawater | EKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0209986_104349754 | 3300024433 | Deep Subsurface | AKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
Ga0209986_105301143 | 3300024433 | Deep Subsurface | LESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
(restricted) Ga0255049_100434411 | 3300024517 | Seawater | RAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
(restricted) Ga0255048_102576304 | 3300024518 | Seawater | AEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
(restricted) Ga0255048_104758471 | 3300024518 | Seawater | LMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI |
(restricted) Ga0255047_102393393 | 3300024520 | Seawater | TKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0209337_12082991 | 3300025168 | Marine | ARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0209374_10591541 | 3300025705 | Marine | AQWLMDRAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAYVWL |
Ga0209273_102688143 | 3300027790 | Marine Sediment | FAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0209578_103533571 | 3300027820 | Marine Sediment | MARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
(restricted) Ga0255054_102764573 | 3300027856 | Seawater | EKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
(restricted) Ga0255054_103437894 | 3300027856 | Seawater | RAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
(restricted) Ga0255055_101879381 | 3300027881 | Seawater | EAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
Ga0256368_10153381 | 3300028125 | Sea-Ice Brine | KEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0307494_10451971 | 3300031252 | Sackhole Brine | LESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV |
Ga0316204_103002603 | 3300032373 | Microbial Mat | LMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI |
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