NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088833

Metagenome Family F088833

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088833
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 45 residues
Representative Sequence EKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Number of Associated Samples 64
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.83 %
% of genes near scaffold ends (potentially truncated) 97.25 %
% of genes from short scaffolds (< 2000 bps) 86.24 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.725 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(56.881 % of family members)
Environment Ontology (ENVO) Unclassified
(68.807 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(75.229 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 86.36%    β-sheet: 0.00%    Coil/Unstructured: 13.64%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF04690YABBY 8.26
PF00145DNA_methylase 2.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 2.75


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.72 %
All OrganismsrootAll Organisms30.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10016232Not Available3718Open in IMG/M
3300000117|DelMOWin2010_c10025205All Organisms → Viruses3006Open in IMG/M
3300003141|Ga0052246_1020745Not Available815Open in IMG/M
3300004097|Ga0055584_101333152All Organisms → Viruses → unclassified viruses → Circular genetic element sp.747Open in IMG/M
3300005078|Ga0070770_10223450Not Available851Open in IMG/M
3300005086|Ga0072334_10428082Not Available549Open in IMG/M
3300005086|Ga0072334_10674267Not Available500Open in IMG/M
3300005086|Ga0072334_11007761Not Available500Open in IMG/M
3300005086|Ga0072334_11149096All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium500Open in IMG/M
3300005086|Ga0072334_11262192Not Available500Open in IMG/M
3300005086|Ga0072334_11374936Not Available500Open in IMG/M
3300005882|Ga0080455_1091307Not Available828Open in IMG/M
3300005882|Ga0080455_1100148Not Available757Open in IMG/M
3300005882|Ga0080455_1144698Not Available534Open in IMG/M
3300006621|Ga0101441_117783Not Available3481Open in IMG/M
3300006920|Ga0070748_1353673All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium518Open in IMG/M
3300007896|Ga0111484_1005742All Organisms → Viruses2841Open in IMG/M
3300007907|Ga0111546_122175Not Available514Open in IMG/M
3300009361|Ga0116590_1000965All Organisms → Viruses3065Open in IMG/M
3300009529|Ga0114919_10715503Not Available681Open in IMG/M
3300009529|Ga0114919_10746437Not Available665Open in IMG/M
3300009529|Ga0114919_10874319Not Available607Open in IMG/M
3300009529|Ga0114919_11014632Not Available558Open in IMG/M
3300009529|Ga0114919_11042080Not Available550Open in IMG/M
3300009529|Ga0114919_11057277Not Available545Open in IMG/M
3300010430|Ga0118733_102467474Not Available1029Open in IMG/M
3300011118|Ga0114922_10265518All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium1438Open in IMG/M
3300011118|Ga0114922_11076878Not Available651Open in IMG/M
3300011128|Ga0151669_103874Not Available1160Open in IMG/M
3300011129|Ga0151672_108765All Organisms → Viruses → Predicted Viral2776Open in IMG/M
3300017709|Ga0181387_1020326Not Available1290Open in IMG/M
3300017709|Ga0181387_1023811All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium1194Open in IMG/M
3300017709|Ga0181387_1050612All Organisms → Viruses → unclassified viruses → Circular genetic element sp.827Open in IMG/M
3300017709|Ga0181387_1133797Not Available512Open in IMG/M
3300017710|Ga0181403_1037119Not Available1025Open in IMG/M
3300017710|Ga0181403_1047902Not Available895Open in IMG/M
3300017710|Ga0181403_1049461Not Available880Open in IMG/M
3300017714|Ga0181412_1057126Not Available977Open in IMG/M
3300017717|Ga0181404_1060407Not Available948Open in IMG/M
3300017719|Ga0181390_1060409Not Available1089Open in IMG/M
3300017720|Ga0181383_1142970All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium643Open in IMG/M
3300017724|Ga0181388_1055189Not Available957Open in IMG/M
3300017724|Ga0181388_1077096All Organisms → Viruses → unclassified viruses → Circular genetic element sp.795Open in IMG/M
3300017725|Ga0181398_1015212All Organisms → Viruses → unclassified viruses → Circular genetic element sp.1938Open in IMG/M
3300017726|Ga0181381_1035444All Organisms → Viruses → unclassified viruses → Circular genetic element sp.1113Open in IMG/M
3300017733|Ga0181426_1050527Not Available821Open in IMG/M
3300017742|Ga0181399_1006653Not Available3521Open in IMG/M
3300017746|Ga0181389_1011504All Organisms → Viruses2908Open in IMG/M
3300017748|Ga0181393_1025914All Organisms → Viruses1687Open in IMG/M
3300017749|Ga0181392_1079300Not Available990Open in IMG/M
3300017749|Ga0181392_1168638All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium638Open in IMG/M
3300017749|Ga0181392_1238968Not Available513Open in IMG/M
3300017751|Ga0187219_1192128Not Available568Open in IMG/M
3300017752|Ga0181400_1087814Not Available923Open in IMG/M
3300017752|Ga0181400_1118418All Organisms → Viruses → unclassified viruses → Circular genetic element sp.766Open in IMG/M
3300017752|Ga0181400_1212288Not Available531Open in IMG/M
3300017752|Ga0181400_1229148Not Available506Open in IMG/M
3300017753|Ga0181407_1094366Not Available756Open in IMG/M
3300017755|Ga0181411_1018944All Organisms → Viruses → unclassified viruses → Circular genetic element sp.2243Open in IMG/M
3300017756|Ga0181382_1012736All Organisms → Viruses2802Open in IMG/M
3300017757|Ga0181420_1068058Not Available1123Open in IMG/M
3300017757|Ga0181420_1137739Not Available734Open in IMG/M
3300017758|Ga0181409_1011198All Organisms → Viruses → Predicted Viral2984Open in IMG/M
3300017758|Ga0181409_1191792Not Available591Open in IMG/M
3300017764|Ga0181385_1194325Not Available613Open in IMG/M
3300017764|Ga0181385_1266760Not Available512Open in IMG/M
3300017765|Ga0181413_1061736All Organisms → Viruses → unclassified viruses → Circular genetic element sp.1155Open in IMG/M
3300017765|Ga0181413_1082148Not Available985Open in IMG/M
3300017765|Ga0181413_1154322All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium692Open in IMG/M
3300017767|Ga0181406_1017617Not Available2277Open in IMG/M
3300017767|Ga0181406_1113078Not Available820Open in IMG/M
3300017769|Ga0187221_1076757Not Available1041Open in IMG/M
3300017770|Ga0187217_1013403All Organisms → Viruses2981Open in IMG/M
3300017770|Ga0187217_1111489Not Available927Open in IMG/M
3300017770|Ga0187217_1142496Not Available805Open in IMG/M
3300017772|Ga0181430_1184243Not Available599Open in IMG/M
3300017773|Ga0181386_1121207All Organisms → Viruses → unclassified viruses → Circular genetic element sp.809Open in IMG/M
3300017776|Ga0181394_1072218Not Available1132Open in IMG/M
3300017776|Ga0181394_1099165All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium932Open in IMG/M
3300017776|Ga0181394_1133163All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium780Open in IMG/M
3300017776|Ga0181394_1138261Not Available762Open in IMG/M
3300017776|Ga0181394_1261794Not Available516Open in IMG/M
3300017779|Ga0181395_1075524All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium1091Open in IMG/M
3300017781|Ga0181423_1069356Not Available1396Open in IMG/M
3300017781|Ga0181423_1256492Not Available653Open in IMG/M
3300017781|Ga0181423_1393951Not Available500Open in IMG/M
3300017782|Ga0181380_1025970Not Available2164Open in IMG/M
3300017782|Ga0181380_1118928Not Available909Open in IMG/M
3300017782|Ga0181380_1118995Not Available909Open in IMG/M
3300017786|Ga0181424_10150951All Organisms → Viruses → unclassified viruses → Circular genetic element sp.996Open in IMG/M
3300017786|Ga0181424_10170800Not Available928Open in IMG/M
3300017786|Ga0181424_10198892All Organisms → Viruses → unclassified viruses → Circular genetic element sp.849Open in IMG/M
3300021365|Ga0206123_10113685All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium1276Open in IMG/M
3300024433|Ga0209986_10434975Not Available591Open in IMG/M
3300024433|Ga0209986_10530114Not Available514Open in IMG/M
(restricted) 3300024517|Ga0255049_10043441Not Available2043Open in IMG/M
(restricted) 3300024518|Ga0255048_10257630Not Available848Open in IMG/M
(restricted) 3300024518|Ga0255048_10475847Not Available604Open in IMG/M
(restricted) 3300024520|Ga0255047_10239339Not Available921Open in IMG/M
3300025168|Ga0209337_1208299Not Available787Open in IMG/M
3300025705|Ga0209374_1059154Not Available1321Open in IMG/M
3300027790|Ga0209273_10268814Not Available699Open in IMG/M
3300027820|Ga0209578_10353357Not Available676Open in IMG/M
(restricted) 3300027856|Ga0255054_10276457All Organisms → Viruses → unclassified viruses → Circular genetic element sp.819Open in IMG/M
(restricted) 3300027856|Ga0255054_10343789Not Available726Open in IMG/M
(restricted) 3300027881|Ga0255055_10187938All Organisms → Viruses → unclassified viruses → Circular genetic element sp.1126Open in IMG/M
3300028125|Ga0256368_1015338Not Available1328Open in IMG/M
3300031252|Ga0307494_1045197Not Available509Open in IMG/M
3300032373|Ga0316204_10300260Not Available1245Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater56.88%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface9.17%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater6.42%
WaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Water6.42%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment2.75%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment2.75%
WaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Water2.75%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.83%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.92%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.92%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.92%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.92%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.92%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.92%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.92%
Marine SedimentEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300003141Marine sediment microbial communities from deep subseafloor of Shimokita Peninsula, Japan - 107 mbsfEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005078Microbial Community from Halfdan Field MHBA5EnvironmentalOpen in IMG/M
3300005086Microbial Community from Halfdan Field MHDA3EnvironmentalOpen in IMG/M
3300005882Hydrocarbon microbial community from Halfdan Field MHFEnvironmentalOpen in IMG/M
3300006621Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time pointEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007896Microbial communities from sediment of the River Tyne Estuary, UK ? Live_176d_3EnvironmentalOpen in IMG/M
3300007907Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_3EnvironmentalOpen in IMG/M
3300009361Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_3 SPAdesEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300011129Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025705Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)EnvironmentalOpen in IMG/M
3300027790Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300031252Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SW 0.2EnvironmentalOpen in IMG/M
3300032373Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1001623213300000116MarineARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
DelMOWin2010_1002520593300000117MarineRAEKKEQKETSLEALMKFNVFLSIATLVTVAGATVADYILMAWTWL*
Ga0052246_102074513300003141Marine SedimentFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGAAVADYVLMAWLWI*
Ga0055584_10133315213300004097Pelagic MarineMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI*
Ga0070770_1022345013300005078WaterEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0072334_1042808213300005086WaterWLMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI*
Ga0072334_1067426723300005086WaterAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0072334_1100776123300005086WaterTKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMSWLWI*
Ga0072334_1114909613300005086WaterMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0072334_1126219223300005086WaterAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0072334_1137493613300005086WaterFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0080455_109130733300005882WaterESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0080455_110014813300005882WaterAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0080455_114469813300005882WaterTSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0101441_11778373300006621Marine Surface WaterFATWLMERQEKKEAKETSLESLMKFNIFLSTLTLVSVAGATALDYAMIAWLWV*
Ga0070748_135367323300006920AqueousEAKETSLESLMKFNVFLSIATLVSVAAATVADYVLMAWLWV*
Ga0111484_100574213300007896SedimentSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0111546_12217513300007907SedimentLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0116590_100096513300009361SedimentLMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI*
Ga0114919_1071550343300009529Deep SubsurfaceAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI*
Ga0114919_1074643713300009529Deep SubsurfaceEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0114919_1087431933300009529Deep SubsurfaceMARAEKKEAKETSLESLMKFNVFFSIATLVSVAGATVADYVLMAWLWI*
Ga0114919_1101463233300009529Deep SubsurfaceLMDRAEKKEQKETSLESLMKFNVFLSIVTLVSVAGATVADYILMAYVWI*
Ga0114919_1104208013300009529Deep SubsurfaceKKEAKETSLESLMKFNVFLSIATLVSVAGSTVADYVLMAWLWI*
Ga0114919_1105727713300009529Deep SubsurfaceKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI*
Ga0118733_10246747413300010430Marine SedimentKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0114922_1026551853300011118Deep SubsurfaceAEWLMARAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWI*
Ga0114922_1107687813300011118Deep SubsurfaceAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0151669_10387443300011128MarineEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI*
Ga0151672_10876523300011129MarineMANATAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV*
Ga0181387_102032613300017709SeawaterRTAKFAERLMARQEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYILMAYVWL
Ga0181387_102381143300017709SeawaterEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181387_105061233300017709SeawaterMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181387_113379723300017709SeawaterMARAEKKEQKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWL
Ga0181403_103711943300017710SeawaterAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMIAWLWI
Ga0181403_104790243300017710SeawaterARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181403_104946113300017710SeawaterSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181412_105712613300017714SeawaterKETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI
Ga0181404_106040713300017717SeawaterAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181390_106040933300017719SeawaterAEKKEEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL
Ga0181383_114297013300017720SeawaterTRFAEWLMARQEKKEAKETSLESLMKFNIFLSIATLVTVAGASVAEYVMMAYLWI
Ga0181388_105518913300017724SeawaterETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181388_107709613300017724SeawaterKFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181398_101521213300017725SeawaterLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL
Ga0181381_103544433300017726SeawaterKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181426_105052713300017733SeawaterKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181399_100665313300017742SeawaterKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0181389_101150483300017746SeawaterAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181393_102591413300017748SeawaterTSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181392_107930013300017749SeawaterSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL
Ga0181392_116863823300017749SeawaterKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181392_123896823300017749SeawaterWLMARQEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0187219_119212813300017751SeawaterMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0181400_108781443300017752SeawaterEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0181400_111841813300017752SeawaterKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181400_121228833300017752SeawaterWLMDRAEKKEEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL
Ga0181400_122914813300017752SeawaterEEKETSLESLMKFNVFLSISTLVAVAGATVADYILMAYVWL
Ga0181407_109436613300017753SeawaterKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181411_101894473300017755SeawaterMDRAEKKEQKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAYVWF
Ga0181382_101273613300017756SeawaterKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181420_106805813300017757SeawaterETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWV
Ga0181420_113773913300017757SeawaterKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL
Ga0181409_101119813300017758SeawaterTTKFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181409_119179213300017758SeawaterTSLESLMKFDIFLSIATLVTVAVVTVADYVMMAYLWI
Ga0181385_119432523300017764SeawaterQEKKEAKETSLEGLMKFNIFLSIATLVTVAGATVADYVMMAYLWI
Ga0181385_126676013300017764SeawaterKFAEWLMARQEKKDAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181413_106173663300017765SeawaterAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0181413_108214813300017765SeawaterKEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI
Ga0181413_115432233300017765SeawaterEWLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0181406_101761713300017767SeawaterQEKKEEKETSLESLMKFNIFLSIATLVTVAGATVADYVMMAYLWI
Ga0181406_111307813300017767SeawaterMTRQEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0187221_107675713300017769SeawaterQEKKDAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0187217_1013403103300017770SeawaterKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0187217_111148943300017770SeawaterAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0187217_114249613300017770SeawaterKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0181430_118424313300017772SeawaterEKKEEKETSLEGLMKFNIFLSIGTLVAVAGATVADYLMMAYLWI
Ga0181386_112120713300017773SeawaterKETSLESLMKFNVFLSIATLVTVAGATIADYVLMAWLWI
Ga0181394_107221843300017776SeawaterLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYILMAWTWV
Ga0181394_109916513300017776SeawaterMARAERKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWI
Ga0181394_113316333300017776SeawaterMARAEKKEDKETSLESLMKFNVFLSIATLVSVAGTTVADYILMAWLWI
Ga0181394_113826113300017776SeawaterKKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYIMIAYTWL
Ga0181394_126179423300017776SeawaterTSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181395_107552443300017779SeawaterAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0181423_106935613300017781SeawaterTKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGTTVADYVLMAWLWV
Ga0181423_125649213300017781SeawaterLMDRAEKKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYIMIAYTWL
Ga0181423_139395113300017781SeawaterLMDRAEKKEEKETSLEGLMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL
Ga0181380_102597073300017782SeawaterAEKKEAKETSLESLMKFNVFLSIATLVTVAGSTVADYVMMAWLWI
Ga0181380_111892833300017782SeawaterLMERQEKKEAKETSLEALMKFNIFLSIGTLVAVAGSTAANYIMMAYTWL
Ga0181380_111899533300017782SeawaterLMERQEKKEAKETSLEALMKFNIFLSIGTLVAVAGSTAANYLMMAYTWL
Ga0181424_1015095133300017786SeawaterLESLMKFNVFLSIATLVTVAGATIADYVLMAWLWI
Ga0181424_1017080013300017786SeawaterKEAKETSLESLMKFNVFLSIATLVSVAGATIADYVLMAWLWV
Ga0181424_1019889213300017786SeawaterEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0206123_1011368553300021365SeawaterEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0209986_1043497543300024433Deep SubsurfaceAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
Ga0209986_1053011433300024433Deep SubsurfaceLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
(restricted) Ga0255049_1004344113300024517SeawaterRAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
(restricted) Ga0255048_1025763043300024518SeawaterAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
(restricted) Ga0255048_1047584713300024518SeawaterLMARAEKKEAKETSLESLMKFNVFLSIATLVTVAGATVADYVLMAWLWI
(restricted) Ga0255047_1023933933300024520SeawaterTKFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0209337_120829913300025168MarineARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0209374_105915413300025705MarineAQWLMDRAEKKEEKETSLESLMKFNVFLSIATLVTVAGATVADYILMAYVWL
Ga0209273_1026881433300027790Marine SedimentFAEWLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0209578_1035335713300027820Marine SedimentMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
(restricted) Ga0255054_1027645733300027856SeawaterEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
(restricted) Ga0255054_1034378943300027856SeawaterRAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
(restricted) Ga0255055_1018793813300027881SeawaterEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI
Ga0256368_101533813300028125Sea-Ice BrineKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0307494_104519713300031252Sackhole BrineLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWV
Ga0316204_1030026033300032373Microbial MatLMARAEKKEAKETSLESLMKFNVFLSIATLVSVAGATVADYVLMAWLWI


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