Metagenome Family F092955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092955
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	108 residues
Representative Sequence	MKKLLITVLVFSGFLFPLLAQVDHDYNVNDRVPIVNATITKEQVPAAVLKAATTQFDMSNPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVKMKNKEGHELWAVYA
Number of Associated Samples	77
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.08 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.879 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (35.514 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.486 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.70% β-sheet: 8.89% Coil/Unstructured: 67.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13715	CarbopepD_reg_2	4.67
PF12680	SnoaL_2	3.74
PF13419	HAD_2	3.74
PF07992	Pyr_redox_2	2.80
PF00072	Response_reg	1.87
PF00890	FAD_binding_2	1.87
PF00795	CN_hydrolase	0.93
PF08281	Sigma70_r4_2	0.93
PF00732	GMC_oxred_N	0.93
PF07733	DNA_pol3_alpha	0.93
PF05199	GMC_oxred_C	0.93
PF08757	CotH	0.93
PF05036	SPOR	0.93
PF03602	Cons_hypoth95	0.93
PF09603	Fib_succ_major	0.93
PF01207	Dus	0.93
PF00171	Aldedh	0.93
PF01370	Epimerase	0.93
PF06283	ThuA	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.87
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.93
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.93
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	0.93
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.93
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.93
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	0.93
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.93
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.93
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.93
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
All Organisms	root	All Organisms	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
cellular organisms	root	All Organisms → cellular organisms	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	23.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	23.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	14.02 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	14.02 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	14.02 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.93 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig164483	Not Available	857	Open in IMG/M
2124908039\|B3_v_NODE_31697_len_608_cov_5_934210	Not Available	658	Open in IMG/M
2140918024\|NODE_213871_length_1878_cov_6.656549	Not Available	1928	Open in IMG/M
3300000854\|WSSedB2T2DRAFT_1037545	Not Available	500	Open in IMG/M
3300001213\|JGIcombinedJ13530_105032927	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2061	Open in IMG/M
3300001213\|JGIcombinedJ13530_105242613	Not Available	598	Open in IMG/M
3300001213\|JGIcombinedJ13530_106560797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	812	Open in IMG/M
3300001213\|JGIcombinedJ13530_108196261	Not Available	1392	Open in IMG/M
3300001868\|JGI24146J20443_1083272	Not Available	529	Open in IMG/M
3300002072\|JGIcombinedJ21914_10118537	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	795	Open in IMG/M
3300002103\|JGI24147J26652_1068919	Not Available	655	Open in IMG/M
3300002183\|JGI24145J26757_10056180	Not Available	900	Open in IMG/M
3300002550\|JGI24131J36419_10035877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1529	Open in IMG/M
3300002569\|JGI24136J36422_10191595	Not Available	517	Open in IMG/M
3300002569\|JGI24136J36422_10197908	Not Available	506	Open in IMG/M
3300003369\|JGI24140J50213_10177610	Not Available	671	Open in IMG/M
3300003432\|JGI20214J51088_10399149	Not Available	917	Open in IMG/M
3300003432\|JGI20214J51088_10571996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	717	Open in IMG/M
3300003432\|JGI20214J51088_10997220	Not Available	551	Open in IMG/M
3300003541\|JGI20214J51650_10265116	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300004242\|Ga0066601_10417911	Not Available	537	Open in IMG/M
3300005259\|Ga0071344_1113229	Not Available	683	Open in IMG/M
3300005947\|Ga0066794_10029798	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1598	Open in IMG/M
3300006950\|Ga0075524_10169322	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	949	Open in IMG/M
3300009029\|Ga0066793_10891668	Not Available	503	Open in IMG/M
3300014494\|Ga0182017_10080340	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300014494\|Ga0182017_10192864	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300014494\|Ga0182017_10508044	Not Available	738	Open in IMG/M
3300014496\|Ga0182011_10391634	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300014498\|Ga0182019_10660362	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	738	Open in IMG/M
3300014502\|Ga0182021_10801670	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1131	Open in IMG/M
3300014502\|Ga0182021_13608287	Not Available	514	Open in IMG/M
3300014502\|Ga0182021_13751687	Not Available	504	Open in IMG/M
3300017938\|Ga0187854_10058299	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1904	Open in IMG/M
3300017938\|Ga0187854_10291167	Not Available	700	Open in IMG/M
3300018018\|Ga0187886_1340905	Not Available	554	Open in IMG/M
3300018070\|Ga0184631_10470366	Not Available	515	Open in IMG/M
3300019785\|Ga0182022_1173810	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300019788\|Ga0182028_1016260	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300019788\|Ga0182028_1077955	Not Available	1069	Open in IMG/M
3300019788\|Ga0182028_1080256	Not Available	940	Open in IMG/M
3300019788\|Ga0182028_1111982	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300022520\|Ga0224538_1025238	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	641	Open in IMG/M
3300024240\|Ga0224522_1080080	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300025443\|Ga0208081_1003411	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3155	Open in IMG/M
3300025533\|Ga0208584_1152681	Not Available	522	Open in IMG/M
3300025718\|Ga0209123_1178400	Not Available	718	Open in IMG/M
3300025725\|Ga0209638_1140792	Not Available	791	Open in IMG/M
3300025750\|Ga0209747_1125618	Not Available	841	Open in IMG/M
3300025750\|Ga0209747_1177774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	658	Open in IMG/M
3300025836\|Ga0209748_1063509	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1497	Open in IMG/M
3300025836\|Ga0209748_1121144	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300025852\|Ga0209124_10031409	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2190	Open in IMG/M
3300025852\|Ga0209124_10087469	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300025865\|Ga0209226_10003797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	6444	Open in IMG/M
3300025888\|Ga0209540_10354565	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300026026\|Ga0210129_1022466	Not Available	1037	Open in IMG/M
3300027719\|Ga0209467_1309634	Not Available	523	Open in IMG/M
3300027739\|Ga0209575_10354246	Not Available	500	Open in IMG/M
3300027887\|Ga0208980_10464463	Not Available	727	Open in IMG/M
3300028649\|Ga0302162_10158694	Not Available	549	Open in IMG/M
3300028664\|Ga0302164_10009014	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300028674\|Ga0302161_10092326	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	755	Open in IMG/M
3300028674\|Ga0302161_10131398	Not Available	642	Open in IMG/M
3300028674\|Ga0302161_10178144	Not Available	561	Open in IMG/M
3300028674\|Ga0302161_10200579	Not Available	533	Open in IMG/M
3300028676\|Ga0302167_10050494	Not Available	1251	Open in IMG/M
3300028767\|Ga0302288_1185191	Not Available	615	Open in IMG/M
3300028769\|Ga0302213_1117723	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	732	Open in IMG/M
3300028769\|Ga0302213_1141601	Not Available	653	Open in IMG/M
3300028772\|Ga0302209_10198611	Not Available	565	Open in IMG/M
3300028862\|Ga0302296_1092023	Not Available	1178	Open in IMG/M
3300028864\|Ga0302215_10054526	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300028864\|Ga0302215_10192516	Not Available	791	Open in IMG/M
3300029923\|Ga0311347_10719274	Not Available	607	Open in IMG/M
3300029984\|Ga0311332_11317273	Not Available	583	Open in IMG/M
3300029987\|Ga0311334_10283076	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300029990\|Ga0311336_12001621	Not Available	514	Open in IMG/M
3300030002\|Ga0311350_11435246	Not Available	613	Open in IMG/M
3300030019\|Ga0311348_10080402	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300030055\|Ga0302173_10116603	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1055	Open in IMG/M
3300030294\|Ga0311349_10421784	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1262	Open in IMG/M
3300030685\|Ga0302285_10142269	Not Available	806	Open in IMG/M
3300030685\|Ga0302285_10182740	Not Available	677	Open in IMG/M
3300030943\|Ga0311366_10109358	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300030943\|Ga0311366_11742331	Not Available	532	Open in IMG/M
3300030943\|Ga0311366_11801347	Not Available	522	Open in IMG/M
3300031232\|Ga0302323_100040035	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4253	Open in IMG/M
3300031521\|Ga0311364_10030709	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5858	Open in IMG/M
3300031521\|Ga0311364_11581187	Not Available	647	Open in IMG/M
3300031722\|Ga0311351_10565536	Not Available	864	Open in IMG/M
3300031722\|Ga0311351_10827407	Not Available	707	Open in IMG/M
3300031726\|Ga0302321_100245515	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1893	Open in IMG/M
3300031726\|Ga0302321_102596545	Not Available	591	Open in IMG/M
3300031902\|Ga0302322_101697168	Not Available	773	Open in IMG/M
3300031902\|Ga0302322_103154355	Not Available	566	Open in IMG/M
3300031918\|Ga0311367_10323774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1596	Open in IMG/M
3300031918\|Ga0311367_11259078	Not Available	732	Open in IMG/M
3300032275\|Ga0315270_10503729	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	781	Open in IMG/M
3300033233\|Ga0334722_10950156	Not Available	606	Open in IMG/M
3300033743\|Ga0334844_115207	Not Available	532	Open in IMG/M
3300033825\|Ga0334843_033248	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300033891\|Ga0334811_186417	Not Available	505	Open in IMG/M
3300034126\|Ga0370486_109716	Not Available	661	Open in IMG/M
3300034155\|Ga0370498_076931	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300034156\|Ga0370502_0147604	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300034281\|Ga0370481_0243597	Not Available	643	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.37%
Aquatic	Environmental → Aquatic	19.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.19%
Peat	Environmental → Terrestrial → Peat	40.19%
Marine	Environmental → Aquatic → Marine	10.28%
Freshwater	Environmental → Aquatic → Freshwater	8.41%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	40.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Pond	Environmental → Aquatic → Freshwater → Pond	2.80%
Lake	Environmental → Aquatic → Freshwater → Lake	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	40.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	22.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.02%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	9.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.80%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	35.51%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	19.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	12.15%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	9.35%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.87%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000854	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 Tule	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001868	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A	Environmental	Open in IMG/M
3300002072	Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005)	Environmental	Open in IMG/M
3300002103	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300005259	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid and Glucose under anaerobic conditions - HA Sample 1	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022520	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E2 20-24	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028664	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_1	Environmental	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028676	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1	Environmental	Open in IMG/M
3300028767	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_1	Environmental	Open in IMG/M
3300028769	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_1	Environmental	Open in IMG/M
3300028772	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1	Environmental	Open in IMG/M
3300028862	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_1	Environmental	Open in IMG/M
3300028864	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_1	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030055	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_1	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030685	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_2	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033825	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_01584450	2124908038	Soil	MKKLFITSLALLAFLIPSIAQVDHDFNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGNDLWAVYAANGDLIESREMSANVAVPTDILDELSKSKYK
B3_v_00510100	2124908039	Soil	MKKLLFSFFAFLGFLFPLLAQVDHDYNVNDREPVISTTIKNDQVPEVVVKAAQAKFDMSNSATWSKFPYAIKEYGWVYDVGASDIKLDRYEVTMKTKKG
B_all_v_02569300	2140918024	Soil	MKKLLFSFFAFLGFLFPLLAQVDHDYNVNDREPVISTTIKNDQVPEVVVKAAQAKFDMSNSATWSKFPYAIKEYGWVYDVGASDIKLDRYEVTMKTKKGD
WSSedB2T2DRAFT_10375451	3300000854	Wetland	MKKLLISVLVFSGFIFPLLAQVDHDYNANDRIPLVNVTITKEQVPASVLKAVATQFDMSSPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVQMKNKQGHDLWAVYAANGELVES
JGIcombinedJ13530_1050329271	3300001213	Wetland	MKKTLFGLTLLMVFMLQSFAQVDHDYNPNDRIPVVDATISKDQVPAAVLQAVNTQFDQNSPVTWSKFPYALKEYGWV
JGIcombinedJ13530_1052426132	3300001213	Wetland	MKKLLVSLLVSCGLIFPLMAQVDHDYNPNDRVPVVNATIAREQIPAAVQKAFNIQFDNANPLTWSKFPYALKEYGWVYDAGAADIALNRFEVTM
JGIcombinedJ13530_1065607972	3300001213	Wetland	LFIFKIVLIDKFIIMKKLFITSSLLVAFMLPLIAQVDHDYNINDKVPVVNQTITKEQVPAAVLKAFNSQFEKNNPITWSKFPYALKEYGWVYDVGASDLPLNRFEVTMKTGTGDDLWAIYSAQGDLI
JGIcombinedJ13530_1081962611	3300001213	Wetland	MKKLLFSFLVFSGFLFPLLAQVDHDYNVNDRVPVVNATITKEQVPAAVLKAAQTQLDLNNPATWSKFPFALKEYGWVYDAAASDIILDRYEVQMVNKEGHELWAVYTANGELVESREAAKDVPVPANI
JGI24146J20443_10832722	3300001868	Arctic Peat Soil	MKKLLFSLLAFLGFLFPLLAQVDHDYNANDREPVRSTLITKDQVPPEVVKAVQTKFDLNNSATWSKFPYALKEYGWVYDVGASDIALDRYEVTMKTKKGDEL
JGIcombinedJ21914_101185372	3300002072	Arctic Peat Soil	MNSFKFYLLXYLFKIFESVNMKKFLTILILVAFGLPLIAQDIDHDYNPNDRVPIVNATITKEQIPAAVLKAVNKQFDKNDPITWSRFPYALKEYGWVYDVGSANIPLNRYEVTMKTGAGNDFWAVY
JGI24147J26652_10689191	3300002103	Arctic Peat Soil	MKKFLVSFLVFSGLIFPLLAQVDHDYNANDRVPIVNTTITKEQVPASVLKAAQTQFDLSNSATWSKFPYALKEYGWVYDVGASDIQLDRYEVTMKNKEGHELFAVYDAKGELVESRELANNVAMPANV
JGI24145J26757_100561801	3300002183	Arctic Peat Soil	MKKLLFSLLAFLGFLFPLLAQVDHDYNANDREPVRSTLITKDQVPPEVVKAVQTKFDLNNSATWSKFPYALKEYGWVYDVGASDVALDRYEVTMKTKKGDELW
JGI24131J36419_100358772	3300002550	Arctic Peat Soil	MKKLLTLSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNDPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMKTTTGNDFWAVYSASGELVETREQIKESPDPKSGLFALLNKVK*
JGI24136J36422_101915951	3300002569	Arctic Peat Soil	MKKLAFSILALFGFLFPLLAQVDHDYNPNDREPIVNAVISKDQVPAAVVKAAQVLFDPNNSATWSRFPYALKEYGWVYDVGASGLKLDRFEVAMKTKKGDNLWAVYTSDGELIESRETANNVA
JGI24136J36422_101979081	3300002569	Arctic Peat Soil	MKKLLISVLVFSGFMFPLLAQVDHDFNDNDRIPIVNTKITKEQVPAAVLNSAQTQFDMSNSGTWSKFPFALKEYGWVYDVGASDIALDHYEVIMKNKQGHDLWAVYSAKGELIE
JGI24140J50213_101776102	3300003369	Arctic Peat Soil	MKKLLITVLVFSGFLFPLLAQVDHDYNVNDRVPIVNATITKEQVPAAVLKAATTQFDMSNPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVKMKNKEGHELWAVYA
JGI20214J51088_103991492	3300003432	Wetland	MKKLLLSILAFLGFLFPLIAQVDHDFNPNDREPGASTVITKDQVPPEVLKAVQTKFDLNNSATWSKFPYALKEYGWVYDVGASDVKLDRYEVTMKTTKGDDLWAVYSPKGELIETRETVNNVA
JGI20214J51088_105719961	3300003432	Wetland	MKKVLVSLVVLFGFIIPMIAQVDHDYNLNDRVPIVNAKLAKDQVPAAVMKAFNTEFNLSDQQTWSKFPFALKEYGWVYDVAASDIPLDRYEVT
JGI20214J51088_109972201	3300003432	Wetland	MEKLFIACVALIGSVLPTFAQVSHDFNPNDKVPVVNGTITKEEVPAAVLKAFSVEFDKNNPLTWSKFPYALKEYGWVYDAGASTIMLDRYEVTMKTDNGADLWAVYNAKGELIETREMSVNVIIPA
JGI20214J51650_102651161	3300003541	Wetland	MKKFLVSILVFLGYLFPLLAQVDHDYNPNDRVPIVNTTITKEQIPAAVLKAATTQFDLSVPATWSKFPYALKEYGWVYDVGASDIKL
Ga0066601_104179111	3300004242	Freshwater	MKKMFFALGLLMVFILQSVAQVDHDYNPNDRVPIVDATIPKDQVPDAVLQAVNKQFDQNNPLSWSKFPYALKEYGWVYDVGASEIPLERFEVTMRTKEGNDLWAVYSAKGELIESREVSRDTAIPQSVQQALA
Ga0071344_11132292	3300005259	Anaerobic Enrichment Culture	LNLKVXXXXXXVLVLVFSGFVFPIFAQVDHDYNVNDRVPVVKATITKDQVPAVVLKAAQTRFDLKDPGSWSKFPYALKEYGWVYDVGAETVNLDRYEVTMKNSS
Ga0066794_100297984	3300005947	Soil	MKKLLISILAFSAFIFPLLGQVDHDYNINDRVPIVNTTITKDQVPAAVLKAAQTQFDLSNPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVTLKNKEGHDLWAIY
Ga0075524_101693222	3300006950	Arctic Peat Soil	MKKLAFSILALFGFLFPLLAQVDHDYNPNDREPIVNAVISKDQVPAAVVKAAQVLFDPNNSATWSRFPYALKEYGWVYDVGASGLKLDRFEVAMKTKKGDNLWAVYTSDGELIESRETANNVALPSNIQEAFSKSQYK
Ga0066793_108916681	3300009029	Prmafrost Soil	MKKLLTLSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNDPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMKTTTGNDFWAVYSASGELVETRELTKD
Ga0182017_100803404	3300014494	Fen	MKKLLVSILALSGFVFPLLAQIDHDFSQNDKVPLINAKITKEQVPAAVLKAAETRFDMANTATWSKFPYALKEYGWVY
Ga0182017_101928642	3300014494	Fen	MKKLLISILALSGFMFPLLAQIDHDFSQNDRIPIINAKITKEQVPAAVIKAAETRFDMSDKGTWSKFPYALKEYGWVYDVGASDIKLDRY
Ga0182017_105080441	3300014494	Fen	MKKLLISILALSGFMFPLLAQVDHDFSQNDRIPLINAKITKEQVPAAVIKAAETRFDMSDKGTWSKFPYALKEYGWVYDVGASDIKLDRY
Ga0182011_103916342	3300014496	Fen	MKKLLISVLALTSFLFPLLAQVDHDYNADDRVPIVNVKITKEQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVRMLTTNGHE
Ga0182019_106603621	3300014498	Fen	MKKLLTLLLFIGLGLQVIAQVDHDYNVNDAIPIVNETITKELVPAAVLKSVNIQFDKNQPLTWSRFPYALKEYGW
Ga0182021_108016701	3300014502	Fen	MKKLLTLSLLLIMVIPLIAQIDHDYNPNDRVPVVNETITKELVPAAVIKAVHTQFDKNNPLTWSRFPFALKEYGWVYDVGASDIPLNRYEVTMKTKTGNDFWAVYSAN
Ga0182021_136082871	3300014502	Fen	MKRVLVSVLALTGFLFPLLAQVDHDYNPNDRIPVVNATITKDQVPPAVLKAVNTEFDKANPLTWSKFPFVLKEYGWVYDVGASDI
Ga0182021_137516871	3300014502	Fen	MKKLIITCFAVLACILPSLAQVDHDYNANDREPVMRDKILKEQVPAAVLKAANNQFDKNNPQTWSKFPYTLKEYGWVYDVGASNIKLDRYEVTMKNKEGGEFWAVYSAAGELIETREMSLNTIIPQ
Ga0187854_100582991	3300017938	Peatland	MKKLLISVLALSGFLFPLLAQIDHDFNQNDRVPLLNTTITREQVPAAVIKAAQTQFDLSNSGTWSKFPYALKEYGWVYDVGASDVKLDRYEVST
Ga0187854_102911671	3300017938	Peatland	MKKLLISVLALFGFLFPLLAQIDHDFSQNDRVPLINAKITKEQVPAAVLKAAETRFDISNTATWSKFPYALKEYGWVYDVGASDVKLDRYEVSMKTKEGNDLWAVYTAKGELVESREASTNIAV
Ga0187886_13409051	3300018018	Peatland	MKKLLFTWLALIGFMLPSLAQVSHDYNVNDREPLVNATITKDKVPAVVLKAVATDFDRNNPLTWSPFPYALKEYGWVYDVGASDVKLD
Ga0184631_104703661	3300018070	Groundwater Sediment	MNCLIKKKLTNEFKIMKKLLVSVLVFTGFIFPLMAQVDHDYNANDRVPVVNATIPKDQVPAAVLKAVARQFDINNPETWSKFPYALKEYEWVYDVGAS
Ga0182022_11738103	3300019785	Fen	MKKLLVSILALSGFVFPLLAQIDHDFSQNDKVPLINAKITKEQVPAAVLKAAETRFDMANTATWSKFPYALKEYGW
Ga0182028_10162603	3300019788	Fen	MKKLLISILALSGFMFPLLAQVDHDFSQNDRIPLINAKITKEQVPAAVIKAAETRFDMSDKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVSMTTKDGHDLWA
Ga0182028_10779551	3300019788	Fen	MKKLLISILALSGFMFPLLAQVDHDFSQNDRIPLINAKITKEQVPAAVIKAAETRFDMSDKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVSMTTKDGHDLWAGSI
Ga0182028_10802562	3300019788	Fen	MKKLLISILALSGFMFPLLAQVDHDFSQNDRIPLINAKITKEQVPAAVIKAAETRFDMSDKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVSMTTKDGHDLWAVYTAKG
Ga0182028_11119821	3300019788	Fen	MKRVLVSVLALAGFLFPLLAQVDHDYNPNDRVPVVNATITKDQVPPAVLKAVNTEFNKDNQLTWSKFPFALKEYGWVYDVGASDIKLNRFEVTMKTDKG
Ga0224538_10252381	3300022520	Soil	MKKLLISVLALTSFLFPLLAQVDHDYNADDRVPIVNVKITKEQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVRMLTTNGHELW
Ga0224522_10800801	3300024240	Soil	MKKLLVSILALSGFVFPLLAQIDHDFSQNDKVPLINAKITKEQVPAAVLKAAETRFDMANTATWSKFPYALKEYGWVYDVGASDVKLDRYEVSMTTKDGHDLWAVY
Ga0208081_10034111	3300025443	Arctic Peat Soil	MKKLLIASVALVGFVLPSVAQVSHDYNPNDREPAINETITKDKVPLAVQKAVNVQFDKNNPLTWSKFPYALKEYGWVYDVGASDIKLDQYKVTMKTDKGDDLWAVYNANGDLIETREVSTNIAVP
Ga0208584_11526811	3300025533	Arctic Peat Soil	MKKLFLTGVLLMAFVIPMLAQIDHDYNPNDRIPITNATITKDQIPAAVLKAFNTQFDKNNPLTWSKFPYALKEYGWVYDVGAADLQLNRFEVTMKTTKGNDLWAVYDPQGNLCETREASANIVVPKYVMDE
Ga0209123_11784002	3300025718	Arctic Peat Soil	MKKFLVSFLVFSGLIFPLLAQVDHDYNANDRVPIVNTTITKEQVPASVLKAAQTQFDLSNSATWSKFPYALKEYGWVYDVGASDIQLDRYE
Ga0209638_11407922	3300025725	Arctic Peat Soil	MKKLLTLSVLVALGLPLIAQIDHDYNPNDRVPLVNTTITKELVPAAVIKAVNTQFDKNNPVTWSKFPYALKEYGWVYDVGASDIPLNRYEVTMKTASGADLWA
Ga0209747_11256181	3300025750	Arctic Peat Soil	MKKLLIALMALVVFVFPSVAQVSHDYNLNDREPGINETITKDKVPLAVQKAVNVQFDKNNPLTWSKFPYALKEYGWVYDVGASDIKLDQYKVTMKTDKGNDLWA
Ga0209747_11777742	3300025750	Arctic Peat Soil	MKKLVFSILALFGFLFPVLAQVDHDYNVNDREPIVNAVITKDQVPAAVVKAVQVMFDPNNSATWSRFPYALKEYGWVYDVGASSLKLDRFEVKMKTNKGDNLWAVYTSDGEIIESRETADNVALPTNIQEA
Ga0209748_10635093	3300025836	Arctic Peat Soil	MKKLLTLSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMKTTTGNDFW
Ga0209748_11211443	3300025836	Arctic Peat Soil	MKKVLVSILVFSGFLFPLLAQVDHDFNDNDRIPIVNSKITKEQVPEAVLKSAQTMFDMDNSATWSKFPFALKEYGWVYDVGASDI
Ga0209124_100314093	3300025852	Arctic Peat Soil	MKKLLISVLAFAAFIFPLLAQIDHDFNANDRVPIVNVTITKEQVPAAVLKGAQTQLELNNSATWSRFPYALKEYGWVYDVGASDIKLDRYEVTMKNKEGHDLWAVYS
Ga0209124_100874691	3300025852	Arctic Peat Soil	MKKLLILVLALSGFLFPLMAQVDHDYNVDDRVPLVNVKITKEQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVRMITTTGH
Ga0209226_100037977	3300025865	Arctic Peat Soil	MKKLLISVLAFTAFVFPLLAQIDHDFNTNDRVPIVNTIITRDQVPAAVIQGAQTQLDLNNTATWSKFPYALKEYGWVYDVGASDIKLDRYEVTMKNKEGHDLWAVYSADGQLVESR
Ga0209540_103545652	3300025888	Arctic Peat Soil	MKKLLVSILVFSGFLFPLLAQVDHDYNVNDRVPIVNATITKEQVPAAVLKAATTQFDLSNPATWSKFPYALKEYGWVYDVGASDIKLDRYEVQMKNKEGHELWAVYSANGELIESREAAK
Ga0210129_10224662	3300026026	Natural And Restored Wetlands	MKKLLISVLVFSGFIFPLLAQVDHDYNANDRIPLVNVTITKEQVPASVLKAVATQFDMSSPVTWSKFPYALKEYGWVYDVGASD
Ga0209467_13096342	3300027719	Freshwater	MKKFLITSLAVLGFVLPSLAQVSHDYNPKDVEPVVTETITKDKVPAAVIKAVETQFDKNNPLTWSKFPFALKEYGWVYDEDASDIVLDRYEVTMKTDNDNELWAVYSSQGELIESREMSTNIPIPPSVMDA
Ga0209575_103542461	3300027739	Freshwater	MKKMFFALGLLMVFILQSVAQVDHDYNPNDRVPIVDATIPKDQVPDAVLQAVNKQFDQNNPLSWSKFPYALKEYGWVYDVGASEIPLERFEVTMRTKEGNDLWAVYSAKGELIESREVSR
Ga0208980_104644631	3300027887	Wetland	MKKLLVTCLAFMGFVFPIFAQVSHDYNPNDREPIANKSIVKDEVPAAVLKAFSTQFDVNNPVTWSKFPYALKEYGWVYDVGAADLDLGRYEVTLKTDNGNELWAVYNADGDLIETREMSTNVPVPGYVYEELQNS
Ga0302162_101586941	3300028649	Fen	MKKFLFSVLALLGLIFPLMAQVDHDFNNNDRDPLINSTITKDQVPAAILKAAQTKFDLNNSATWSKFPYALKEYGWVYDVGASNIKLDRY
Ga0302164_100090144	3300028664	Fen	MKKLIITSLAFLAFLIPSIGQVDHDYNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGNDLWAVYAANGELIESREMSANVAVPTYILEELSKSK
Ga0302161_100923261	3300028674	Fen	MKKLLTFSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMRTTTGNDFWAVYSASGELVETRELTKDLAIPR
Ga0302161_101313981	3300028674	Fen	MKRVLVSVLALAGFLFPLLAQVDHDYNPNDRVPVVNATITKDQVPPAVLKAVNTEFNKDNQLTWSKFPFALKEYGWVYDVGASDIKLNRFEVTMKTDKGGDLWAVYAANGDLIETREVAKDAALSPTVM
Ga0302161_101781442	3300028674	Fen	MKKLLTLSLLVALGLPLIAQIDHDYNPNDRVPLVNTTITKELVPAAVLKAVNTQFDKNNPVTWSKFPFALKEYGWVYDVGTTDLTLNQYEVTMKTASGTDLWAVYSAKGELVETREIAK
Ga0302161_102005791	3300028674	Fen	MKKFLFSVLALLGLIFPLMAQVDHDFNNNDRDPLINSTITKDQVPAAILKAAQTKFDLNNSATWSKFPYALKEYGWVYDVGASNIKLDRYEVTIKNKEGNDLWAVYTVKGELVESREASVNVP
Ga0302167_100504942	3300028676	Fen	MKKLLITSLSLLAFLIPSLAQVDHDYNANDREPEVKATILKDQVPEAVRKAVATQFDKNNPLTWSKFPYALKEYGWVYDVGAANLKLDRYEVTMKNEKGNDLWAVYAANGDLIESREMSVNVAVPTYILDELSKSKYKDWKI
Ga0302288_11851912	3300028767	Fen	MKKLLTLSLLVALGLPLIAQIDHDYNPNDRVPLVNTTITKELVPAAVLKAVNTQFDKNNPVTWSKFPFALKEYGWVYDVGTTDLTLNQYEV
Ga0302213_11177232	3300028769	Fen	MKKLLISVLALTSFLFPLLAQVDHDYNVDDRVPIVNVKITKEQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVRMLTTNGHELWAVYTAKGELVESREAASNIPVPANVME
Ga0302213_11416011	3300028769	Fen	MKKFLFSVLALLGLIFPLMAQVDHDFNNNDRDPLINSTITKDQVPAAILKAAQTKFDLNNSATWSKFPYALKEYGWVYDVGAS
Ga0302209_101986111	3300028772	Fen	MKKLLISVLALTSFLFPLLAQVDHDYNVDDRVPIVNVKITKEQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASDIKLDRYEVRMLTTNGHELWAVYTAKGELVESREAASNIPVPANVMESLSKSQ
Ga0302296_10920231	3300028862	Fen	MKKFLFSVLALLGFIFPLMAQVDHDYNTNDREPLINSTITKDQVPAAILKAAQTKFDLNNSATWSKFPYALKEYGWVYDVGASNIKLDRYEVTIKNKEGNDLWAVYTVKGELVESREASVNVPV
Ga0302215_100545261	3300028864	Fen	MKKIAIIVVGALGFVFPSIAQVSHDFDPTDREPVVTAKLKKEQVPEQVLKAVNTQFDKNNPLTWSKFPYKLKEYGWVYDVN
Ga0302215_101925162	3300028864	Fen	MKKLIITSLAFLAFLIPSIGQVDHDYNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGN
Ga0311347_107192741	3300029923	Fen	MKKLIITSLAFLAFLIPSIGQVDHDYNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGNDLWAVYAANGELIESREMSANVAVPTYILEELSKSKYKDWKIVGNKEI
Ga0311332_113172731	3300029984	Fen	MKRVLVSVLALAGFLFPLLAQVDHDYNPNDRVPVVNATITKDQVPPAVLKAVNTEFNKDNQLTWSKFPFALKEYGWVYDVGASDIKLNRFEVTMKTDKGGDLWAVYAANGDLIETREVAKDAALS
Ga0311334_102830761	3300029987	Fen	MFKYLFKIFKSDIMKKFLTLLILIALGLRMIAQDIDHDYNPNDRVPVVNTTITRDQVPAAVLKAVNKQFDKSDPITWSRFPYALKEYGWVYDVGSADIALNRYEVTMKTGAGNDFWAVYSANGEFVETRELRKNAPV
Ga0311336_120016211	3300029990	Fen	MKKLLTFSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPVTWSKFPFALKEYGWVYDVGTTDLTLNQYEVTMKTASGTDLW
Ga0311350_114352462	3300030002	Fen	MKKLIITSFALLAFLIPSIAQVDHDYNANDREPEVKATILKDQVPEAVRKAVATQFDKNNPLTWSKFPYALKEYGWVYDVGAANLKLDRYEVTMKNEKGNDLWAVYAANGELIESREMSVNVAVPTYILD
Ga0311348_100804021	3300030019	Fen	MKKLLISVLVFSGLIFPLLAQVDHDYNANDRIPLVNVTITKEQVPASVLKSVATQFDMSSPVTWSKFPYALKEYGWVYDVGASD
Ga0302173_101166031	3300030055	Fen	MKKLLTFSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMRTTTGNDFW
Ga0311349_104217841	3300030294	Fen	MKKLLTFSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMRTT
Ga0302285_101422691	3300030685	Fen	MKKFLFSVLALLGFIFPLMAQVDHDYNTNDREPLINSTITKDQVPAAILKAAQTKFDLNNSATWSKFPYALKEYGWVYDVGASNIKLDRYEVTIKNKEGNDLWAVYTAKGE
Ga0302285_101827401	3300030685	Fen	MKKLLISILVFSGFIFPLLAQVDHDYNVNDRVPVVNATITKEQVPAAVLKAATTQFDLSIPATWSKFPYALKEYGWVYDVGASDIKLDRYEVQMKNKEGHELWAVYNANGELIESREAAKDVAMPVNVQ
Ga0311366_101093583	3300030943	Fen	MKKLLISVLVFSGFIFPLLAQVDHDYNANDRIPLVNVTITKEQVPASVLKAVATQFDMSSPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVQ
Ga0311366_117423311	3300030943	Fen	MKKLLITSFALVAFLIPSLAQIDHDYNPNDRVPEVKATILKDQVPEAVRKAVVTQFDKDNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKTAEGNDLWAVYAANGELIE
Ga0311366_118013471	3300030943	Fen	MKKLLISVLVFSGFIFPLLAQVDHDYNVNDRIPIVNVTITKEQVPASVLKAVATQFDMSSPVTWSKFPYALKEYGWVYDVGASDIKLDRYEVQMKNKEGYDLWAVYAANGV
Ga0302323_1000400355	3300031232	Fen	MKKLLTLSLLVALGLPLIAQIDHDYNPNDRVPLVNTTITKELVPAAVLKAVNTQFDKNNPVTWSKFPFALKEYGWVYDVGTTDL
Ga0311364_100307091	3300031521	Fen	MKKLLTLSLLVALGLPLIAQIDHDYNPNDRVPLVNTTITKELVPAAVLKAVNTQFDKNNPVTWSKFPFALKEYGWVY
Ga0311364_115811872	3300031521	Fen	MKKIMVSILVFSGFLFPLLAQVDHDFNLNDRVPIVNSIITKDQVPAAVIKAAQVQFDLSNPATWSKFPYALKEYGWVYDI
Ga0311351_105655362	3300031722	Fen	MKKLIITSLAFLAFLIPSIGQVDHDYNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGNDLWAVYAANGELIESREMSANVAV
Ga0311351_108274071	3300031722	Fen	MKKLLITSLSLLAFLIPSLAQVDHDYNANDREPEVKATILKDQVPEAVRKAVATQFDKNNPLTWSKFPYALKEYGWVYDVGAAN
Ga0302321_1002455153	3300031726	Fen	MKKLIITSLAFLAFLIPSIGQVDHDYNANDREPEVKATILKDQVPEAVRKAVAIQFDKNNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKNEKGNDLWAVYAANGELIESREMSANVAVPTYILEELSKSKYKDWKI
Ga0302321_1025965451	3300031726	Fen	MKKLLITSLSLLAFLIPSLAQVDHDYNANDREPEVKATILKDQVPEAVRKAVATQFDKNNPLTWSKFPYALKEYGWVYDVGAANLKLDRYEVTMKNEKGN
Ga0302322_1016971681	3300031902	Fen	MKKFLVSFLALCGLLFPLLAQVDHDFDPNDRIPLVNTTITKDQVPAEVLKAVNTQFDKNNVLTWSKFPFALKEYGWVYDAGASDI
Ga0302322_1031543551	3300031902	Fen	MKKLLFTVLALCGFLFPLLAQVDHDYNPNDLVPVANAKITKEQVPAVVLKAVNTQFDKENVLTWSRFPFALKEYGWVYDQGAADLKLDRYEVTMKTTTGDDLWAVYSAEGNLVET
Ga0311367_103237741	3300031918	Fen	MKKLLTFSVLVALGLPLIAQVDHDYNPNDRVPLVNTTITKDLVPLAVVKAVNTQFDKNNPLTWSRFPYALKEYGWVYDVGASDIPLNRYEVTMR
Ga0311367_112590781	3300031918	Fen	MKKLLITSFALVAFLIPSLAQIDHDYNPNDRVPEVKATILKDQVPEAVRKAVVTQFDKDNPLTWSKFPYALKEYGWVYDVGAANIKLDRYEVTMKTAEGNDLWAVYAANGELIES
Ga0315270_105037291	3300032275	Sediment	MKKMFAMVLFFGVLVFPMVAQVDHDYNPNDRVPMVNVTITKDQVPAAVLKAVNTQFDKNNPLTWSKFPFALKEYGWVYDVGAADLPLNRFEVTMKTKDGNDLWAVYSADGQLIETNELSKNIVVP
Ga0334722_109501561	3300033233	Sediment	MKKFLISFLALCGLLFPMLAQVDHDYNPNDRIPLVNTTITKDQVPAAVLKAVNTQFDKNNVLTWSKFPFALKEYGWVYDAGTSDIPLNCYEVTMNTN
Ga0334844_115207_1_252	3300033743	Soil	MKKLLISVLALTSFLFPLLAQVDHDYNVDDRVPIVNVKITKDQVPAAVLKAAQTRFDIADKGTWSKFPYALKEYGWVYDVGASD
Ga0334843_033248_2_301	3300033825	Soil	MKKLLISILALSGFMFPLLAQIDHDFSQNDRVPLINAKITKEQVPAAVLAAAQKQFDLSKVETWSKFPYALKEYGWVYDVGASDVKLDRYEVTMKTKEGH
Ga0334811_186417_3_299	3300033891	Soil	MKKLLVSILALSGFVFPLLAQIDHDFSQNDKVPLINAKITKEQVPAAVLKAAETRFDMANTATWSKFPYALKEYGWVYDVGASDVKLDRYEVSMTTKDG
Ga0370486_109716_408_659	3300034126	Untreated Peat Soil	MKKILISFGALLGFLLPSVAQVSHDWNVNDRDPVINETITKEKVPAVILSAFDKKFDINSPATWSKFPYALKEYGWVYDVGASD
Ga0370498_076931_366_761	3300034155	Untreated Peat Soil	MKKLLVSILALAGLLFPLLAQVDHDYNVNDRVPIVNATITREQVPAEVLKAATKQFDLSNPASWSKFPFALKEYGWVYDVGASDIKLDRYEVSLKNKEGHDLWAVYTADGQLVESREASKDVAMPSNVQVAL
Ga0370502_0147604_348_749	3300034156	Untreated Peat Soil	MKKILVSILAFFSLMFPLLAQVDHDYNVNDRVPLVNATITKEQVPAEVLKAATKQFDLNNPASWSKFPFALKEYGWVYDVGASDIKLDRYEVTLKNKEGHDLWAVYTADGQLVESREASKDVAMPSNVQLALAK
Ga0370481_0243597_1_336	3300034281	Untreated Peat Soil	MKKLLFSVLALFGFLFPLLAQVDHDYNPNDRVPLVNTTITKEQVPAAVLKAVNTQFDKNNILTWSRFPFALKEYGWVYDQGASDIKLNRYEVTMKTNTGDELWAVYGADGVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092955

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences