Sample 3300001239

3300001239: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin

Overview

Basic Information
IMG/M Taxon OID	3300001239 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0047444 \| Gp0054484 \| Ga0011565
Sample Name	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
Sequencing Status	Permanent Draft
Sequencing Center	McGill University
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	342840739
Sequencing Scaffolds	42
Novel Protein Genes	46
Associated Families	41

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1
All Organisms → Viruses → unclassified bacterial viruses → Methanosarcina virus MetMV	1
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
Type	Engineered
Taxonomy	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Fort McMurray in northeastern Alberta, Canada
Coordinates	Lat. (^o)	57.01116	Long. (^o)	-111.6	Alt. (m)	N/A	Depth (m)	0 to .1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002995	Metagenome / Metatranscriptome	514	Y
F004260	Metagenome / Metatranscriptome	446	Y
F004466	Metagenome / Metatranscriptome	437	Y
F007025	Metagenome / Metatranscriptome	359	Y
F007685	Metagenome / Metatranscriptome	346	Y
F008498	Metagenome / Metatranscriptome	332	Y
F012606	Metagenome / Metatranscriptome	279	Y
F013086	Metagenome / Metatranscriptome	274	Y
F014494	Metagenome / Metatranscriptome	262	Y
F014503	Metagenome / Metatranscriptome	262	Y
F017273	Metagenome / Metatranscriptome	241	Y
F019056	Metagenome / Metatranscriptome	232	Y
F021289	Metagenome / Metatranscriptome	219	Y
F024119	Metagenome / Metatranscriptome	207	Y
F025983	Metagenome / Metatranscriptome	199	Y
F029429	Metagenome / Metatranscriptome	188	Y
F039125	Metagenome / Metatranscriptome	164	Y
F039997	Metagenome / Metatranscriptome	162	Y
F041590	Metagenome	159	N
F041729	Metagenome	159	Y
F041736	Metagenome / Metatranscriptome	159	Y
F044988	Metagenome	153	Y
F045610	Metagenome	152	Y
F050213	Metagenome / Metatranscriptome	145	Y
F050470	Metagenome / Metatranscriptome	145	Y
F054030	Metagenome / Metatranscriptome	140	N
F060123	Metagenome / Metatranscriptome	133	Y
F064355	Metagenome / Metatranscriptome	128	Y
F065428	Metagenome / Metatranscriptome	127	Y
F065781	Metagenome / Metatranscriptome	127	Y
F069847	Metagenome	123	Y
F074421	Metagenome / Metatranscriptome	119	Y
F075677	Metagenome	118	Y
F079798	Metagenome / Metatranscriptome	115	Y
F083899	Metagenome	112	Y
F085364	Metagenome	111	Y
F088788	Metagenome / Metatranscriptome	109	N
F091069	Metagenome / Metatranscriptome	108	Y
F092306	Metagenome / Metatranscriptome	107	Y
F096288	Metagenome	105	N
F099198	Metagenome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Draft_10017235	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515	Open in IMG/M
Draft_10026203	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	685	Open in IMG/M
Draft_10031096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	643	Open in IMG/M
Draft_10033724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657	Open in IMG/M
Draft_10038813	Not Available	635	Open in IMG/M
Draft_10055828	Not Available	684	Open in IMG/M
Draft_10065332	Not Available	542	Open in IMG/M
Draft_10067827	Not Available	748	Open in IMG/M
Draft_10072773	Not Available	806	Open in IMG/M
Draft_10072941	Not Available	685	Open in IMG/M
Draft_10074313	Not Available	615	Open in IMG/M
Draft_10091476	Not Available	639	Open in IMG/M
Draft_10095996	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	788	Open in IMG/M
Draft_10100309	Not Available	612	Open in IMG/M
Draft_10108714	Not Available	608	Open in IMG/M
Draft_10109294	Not Available	602	Open in IMG/M
Draft_10139694	Not Available	526	Open in IMG/M
Draft_10144861	Not Available	640	Open in IMG/M
Draft_10149401	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
Draft_10149419	Not Available	540	Open in IMG/M
Draft_10162044	Not Available	685	Open in IMG/M
Draft_10168547	Not Available	618	Open in IMG/M
Draft_10168795	Not Available	523	Open in IMG/M
Draft_10179080	Not Available	645	Open in IMG/M
Draft_10197028	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	611	Open in IMG/M
Draft_10203563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	630	Open in IMG/M
Draft_10217934	Not Available	584	Open in IMG/M
Draft_10227422	All Organisms → Viruses → unclassified bacterial viruses → Methanosarcina virus MetMV	582	Open in IMG/M
Draft_10230544	Not Available	550	Open in IMG/M
Draft_10275239	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	586	Open in IMG/M
Draft_10278801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	611	Open in IMG/M
Draft_10316229	All Organisms → cellular organisms → Bacteria	3435	Open in IMG/M
Draft_10320845	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
Draft_10327233	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3224	Open in IMG/M
Draft_10328802	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1128	Open in IMG/M
Draft_10356499	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
Draft_10363706	All Organisms → Viruses → Predicted Viral	1155	Open in IMG/M
Draft_10446213	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	968	Open in IMG/M
Draft_10455323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4642	Open in IMG/M
Draft_10459116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	843	Open in IMG/M
Draft_10475142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1748	Open in IMG/M
Draft_10489401	Not Available	531	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Draft_10017235	Draft_100172351	F014503	MGLIAYKGGWVRARKTSVHHWRFEDGKTCPNPGSKWEMEPPPRGWYCWVYPDDDNEFEAWMAKNCPTTDCTHRFNSGNPMYTVYIKDDTEAMLFNLRWM*
Draft_10026203	Draft_100262032	F024119	MAYVLGGANNEADGFTTAISNFALRAMHESQGLVNMTNVVTPTQGNTFLVPNFAPITYADYNPAGSGGTWGTGDAVVQNPALAQGSITATPAVATTAFDIFYGWTASFQLAATLGAELGVQFR*
Draft_10031004	Draft_100310042	F091069	DYKRSYNLTYVVRMWKRTDVKTPVVNRQDYTMYLENFAGMLWFHTDVHKWSSKVKTKYLEDLNLLQHLVNIPIVALVEEDNKKLAKFGEVTGWKVIDQMNLNNGKVGLVYTRSL*
Draft_10031096	Draft_100310961	F096288	YCTSVRERTIAVSTKKRRRCMAATPKIIQVSWIDAVADVGWESKTKAEIHHCITVGYLVDETDEALCLASTWSVDQTNARMHIPKAWIKNRKVLAREDTISQGKGTKSAKVGRKATVRKVSTVNRA*
Draft_10033724	Draft_100337241	F017273	MNKKPVAKKPAGKPMGYAKGGMTFKPCAGCPNAAKCKAAGK
Draft_10033724	Draft_100337243	F039997	MFPNGALMRCEAVPEGCVLVIEPEEPQEVDFPAVIDQTQAVQEAERGNKP*
Draft_10038813	Draft_100388132	F069847	MAIIWLKFKGYIIALASVIASVVAIYWAGRRQGYNSAENDAREADNAQARKIEDVADRVRRSDGNNVTAIERLRVARKLRDL*
Draft_10055828	Draft_100558281	F054030	IAFTGPIREVEGLAFASCTELYSADLVQTPAANATGLFSFTAKQVDKFPTQMEDATIEIEPKEDEVSIADIVSRLAALETAFGDYKSKMEMPAEEPAAEPMKEEMAAELSVISKLEAKLDSIISNFGAAPVKASVVAEEKAVEKFDLKAVINQKTEELGSRTEAIRFAMRNHREAYIEARDNNELNF*
Draft_10065332	Draft_100653321	F044988	EMLTPERVTELWPVLEPHFDAACKGNEIAKDELDAKDIYILAITGLVAIFVGFEDGEPACVMGIQFNTTNGRKCADVMALAGRGLMRFKAAYWHIILEWLKANEVEFLDAYAPERLAKIYMNRFGFNKSCMYVRMAL*
Draft_10067827	Draft_100678273	F045610	ETLQILTKDKPMMKKVAAEAVKGHEKKMHKMAKGGVTRADGCVSKGHTKGKMIAMKKGGAC*
Draft_10072773	Draft_100727732	F065428	MATETHDKLIKALQEYIKWQDRFEYKNSDEAGIKARYWLSEIRNEATMRRIEIQKKGNREKQPEKAW*
Draft_10072941	Draft_100729411	F079798	MSTNSQIAFNPIGETVVVAAAAVAPAGVQAPVYEKFNPQNAGQYRFVNAGSDTVFLGTGPTAAEAQANA
Draft_10074313	Draft_100743131	F041729	MAAKTFEGSVSIVLNTKGEIALKRDSEGKFNAGNAVECYDTMLKLAKSRKATINTYSLFIPENGSEPVLLANRYGNPYIALLPKRADGQAK
Draft_10091476	Draft_100914763	F029429	MTPSRLKLARAYLGYSLTDMADALRLSPTTGATTIRKMEAGKVNITGPISVAVDAMLKGYDPF
Draft_10095996	Draft_100959961	F002995	RIVSEIGNGSTDAGARKLYQMMNRVQKRRGKTVGKGKVAVDSKAYKEVDKL*
Draft_10100309	Draft_101003091	F074421	GEVDMMGAYDKKYQEALGQLNRLGTGLERNDAYRVGQASIKVNP*
Draft_10108714	Draft_101087141	F041590	AFTIDIPTSALPDTSTVPAQFRPLVDSALLDACEQTLNTFVTSKATAGNMQIPVGLFDLEKLLTATAQRRMTAALLIGMWRNSSKYVLEVAPKLTSQTGSALLRYQANIEKHEKRLAALTGKNPELNMSAEDLDKLMVNLAEADSETPYGEYLAQRTEEIRSKLVEDSEAL*
Draft_10109294	Draft_101092942	F060123	MAFSGSISSTTFNALKVVDHAFRRCRLPAQAITSEMQAYALESLYLLLSELANT
Draft_10139694	Draft_101396942	F041736	NRMRFVMATMLDVEHEWQNSKWKDKSDMIDPDKPMIVQVGDYGYEVQSCGGDGDIEGFVIQCKDAPVCKWEGMECIKL*
Draft_10144861	Draft_101448611	F075677	MKGENVMTINMMEVIANVTLTKVCSIKADKDSTEAKNINLKVKFDGAVLSSVFDKAVSGAVIAWQNGVGRKQFDTFKNNQTVEIQFSAPASRTAIDPEQAMITQLAGMTPEQQEAKVRDMVAKALATNQLRQEFNNIK*
Draft_10149401	Draft_101494011	F007025	MGGSFVILIDFFPEDCCKGTELTEGWYWYEDDGDELGGPYENEEAAIEAASNGKGW*
Draft_10149419	Draft_101494192	F017273	MPGMMMKKDKSAAKPMAYKKGGMVFKPCAKCPSPAKCKAAGQCALKAKK*
Draft_10162044	Draft_101620441	F041729	MSAKTFEGSVSIVLNTKGEIALKKDSEGKFSAQNAGECYETMTKLAKARKASINKYSLFMVENGSEPVMLANRYGNPYIALLPKRADGQAKRSTVTKLA*
Draft_10168547	Draft_101685471	F041590	METSTTYTITLTRTKVADVPAPLPMHTRIDTRTRKPESRAYTIDLPTAALPDTSEVPAQFRPLVDSALLDACEQTLNTFVTSKATAGNMNIPAHLFDLDKLLTATAQRRMTAALLIGMWRNSSKYVLEVAPKLTSQTGSALLRYQANIEKHEKRLAALTGKNPELNMSAEDLDKLMVNLAEADSETPY
Draft_10168795	Draft_101687952	F013086	MNERKLIGYTERDEGFYSMYEPANGSIVTQAFIMCKYCNGSIYHCMGPRYDAVCLTCYEKDPDER*
Draft_10179080	Draft_101790802	F085364	MAMVRLFVVQDNRRTFVDVPYGQHLETQADLEMQGANVYHAALLSAPPKVRNYRQAARLNQRLY*
Draft_10197028	Draft_101970281	F004260	MAVEDRLLGKLKADQQAFAFEALKRPVERDAFEYGYRVGMVAGYEAAIKALLDL
Draft_10203563	Draft_102035631	F092306	GLIMTMPATFYEGPGWQQSSEPILIVDVQEADIWPVDNRSGSGTKDQIDEGLHPIVAIGSQTAAGGRPLNLTGVVISCNISVHGTATDRVMVNIADGAIVRQYVANVLTYNMGAAATFEQAPVVGQPVYVDDSDDLSEGVTCSLSPLNDAGVRNPLAGYLWYCQDEIADGQVGGSRATSTFDTSLLNSLVEQEYCVLLVNAARELA*
Draft_10217934	Draft_102179341	F050213	MTYLIQLLKSRTVLFALLLAALSVVQGHIGLLPLTPVNQMFVGIGISVIITLLRIVTTQPIADK*
Draft_10227422	Draft_102274222	F083899	MTYYQKNRPRLLELARKYREGNRAEINRKQRERYATDDKYRQYQADYREEYRRLYGRVENNGPGKDTRSVN*
Draft_10230544	Draft_102305441	F008498	VANVTYKNQPAIDKTKGNVPLAGTSHIYRVKKRLWNDSIEDVLRGLFIGKTLHVCCGKSALGDVRIDADPENKPDIVCDAADMTACVADGAFETVLCDPPYNGQFQWNHDLLHELARVATKRIIFQHWFMPANPDGRYKKAQNGLRFRMCWYGS
Draft_10245490	Draft_102454902	F091069	VEANSVKTPVVNRQDYTMYLENFAGMLWFHTDVHKWSSKVKTKYLEDLNLLQHLVNIPIIALVEEDNKKLAKFGEVTGWKVIDQMNLNNGKVGLVYTRSL*
Draft_10275239	Draft_102752393	F014494	MATKHFECDECGARGKIVLKSDNQADECVYCPICSADIYEEEELDR*
Draft_10278801	Draft_102788011	F021289	YPVLFNDVSEFQIQYVHPLPQNEVIKCDSAGFGLVLMHRSIVPIMREKYPNQSMFMETAGGHDDQFIGEDIIFFRKMKAAGIPLHAHTGALVKHMKRFSLDYDYYGMYWTMDSIQKKMKEQPN*
Draft_10278801	Draft_102788012	F007685	VAGRDITEGRATRAIAVDVGVVSTSAIWQNTDVAYDVAVGGMPFIYANQRCTSLYPTDCTIPTR*
Draft_10316229	Draft_103162293	F088788	MQVTIPEEIRRIFPVEAGSRLSWSVEGDSLVARRIRGVKELQGCLTSNVPFPGAEAEKAAVAAQRAKHYAARNRRP*
Draft_10320845	Draft_103208454	F050470	VGLAARGARNLTGKIEKIEDQDALAQVRRQARRVVFKAFLAAIPLTLIAFALPQLW*
Draft_10327233	Draft_103272336	F025983	MAVNESRSLNSSLDEGATDGKYRKVRPNTTVDAGKGDQIVRANRRGLHPYWNYGFVDNEAVAKVNPVKPAGAGKSQKSTTPVFDIDVATQQY*
Draft_10328802	Draft_103288023	F065781	MNEGGRAGLWAVAYLLIVGVTAYFTIFMIIFSIIKTLVGVE*
Draft_10356499	Draft_103564992	F050470	VGLAARGARNLTGKIEKIEDQDALAQVRRQARRVVFKAFLASISLTLIALVLP*
Draft_10363706	Draft_103637061	F039125	MGDRANFGFRVNKDEPTLFLYGHWAGYEMLSQLAHALEAARPRWQDAAYGTRIAISHMIGTDWA
Draft_10446213	Draft_104462133	F064355	KKFSIFNFKLFYYLRQILGNEYPDSKSEVKKNKVVVEDNLRWQDDGGPVVEVVNTIDPASENYPTKPTDGTGSAL*
Draft_10455323	Draft_104553233	F019056	MSRQGLTARNPVWPAPGFEDTKLGVLMEPEVRHGTSEVYTRVQA*
Draft_10459116	Draft_104591162	F004466	MDEEKITGMYELLAAVEAVIQAADPAKREVLAETIDAYAEGPFGEEFFWATSGQAPTLLHLLLSEIDAACRPESQSKPRAAIRLVDRKPEGSA*
Draft_10475142	Draft_104751422	F012606	MAISDRRAVTVLLTDEHLSKMIEDHLLVENEIGDRVKVARIVQKLLDTSLGLPEKPWHDWDDWAKGFE*
Draft_10489401	Draft_104894011	F099198	MADAFTALVGAVIMIGYILLIAGKLAAPPLWICSLIGLALMLWAFWGDDWKPLLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001239: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences