Sample 3300025801

Overview

Basic Information
IMG/M Taxon OID	3300025801 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101341 \| Ga0210097
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	265678279
Sequencing Scaffolds	55
Novel Protein Genes	56
Associated Families	46

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium SG8_38_1	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina ovata	1
All Organisms → cellular organisms → Bacteria	3
Not Available	17
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5
All Organisms → cellular organisms → Bacteria → Proteobacteria	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group	2
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2
All Organisms → cellular organisms → Bacteria → FCB group	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → methanotrophic bacterial endosymbiont of Bathymodiolus sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.197102	Long. (^o)	-122.010033	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002422	Metagenome / Metatranscriptome	560	Y
F008498	Metagenome / Metatranscriptome	332	Y
F009862	Metagenome / Metatranscriptome	312	Y
F011939	Metagenome / Metatranscriptome	285	Y
F013130	Metagenome / Metatranscriptome	274	Y
F015489	Metagenome / Metatranscriptome	254	Y
F016664	Metagenome / Metatranscriptome	245	Y
F016971	Metagenome / Metatranscriptome	243	Y
F023130	Metagenome / Metatranscriptome	211	Y
F024001	Metagenome / Metatranscriptome	208	Y
F029006	Metagenome	189	Y
F029273	Metagenome / Metatranscriptome	189	Y
F029285	Metagenome / Metatranscriptome	189	Y
F033045	Metagenome / Metatranscriptome	178	Y
F034003	Metagenome	176	Y
F038726	Metagenome / Metatranscriptome	165	Y
F039551	Metagenome	163	Y
F041201	Metagenome / Metatranscriptome	160	Y
F045104	Metagenome / Metatranscriptome	153	Y
F045768	Metagenome / Metatranscriptome	152	Y
F048676	Metagenome / Metatranscriptome	148	Y
F050465	Metagenome	145	Y
F050940	Metagenome	144	Y
F056715	Metagenome / Metatranscriptome	137	Y
F057476	Metagenome / Metatranscriptome	136	Y
F058158	Metagenome / Metatranscriptome	135	Y
F058543	Metagenome	135	N
F060656	Metagenome	132	Y
F063813	Metagenome / Metatranscriptome	129	N
F071201	Metagenome	122	Y
F072487	Metagenome / Metatranscriptome	121	Y
F077315	Metagenome / Metatranscriptome	117	Y
F078289	Metagenome / Metatranscriptome	116	N
F078881	Metagenome	116	Y
F082105	Metagenome / Metatranscriptome	113	Y
F085725	Metagenome	111	Y
F086467	Metagenome / Metatranscriptome	110	Y
F086688	Metagenome / Metatranscriptome	110	Y
F089490	Metagenome / Metatranscriptome	109	Y
F091594	Metagenome / Metatranscriptome	107	Y
F092312	Metagenome	107	N
F097472	Metagenome	104	Y
F097602	Metagenome / Metatranscriptome	104	Y
F102142	Metagenome / Metatranscriptome	102	Y
F104552	Metagenome / Metatranscriptome	100	Y
F105195	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210097_1001728	All Organisms → cellular organisms → Archaea	5523	Open in IMG/M
Ga0210097_1002924	All Organisms → cellular organisms → Archaea	3994	Open in IMG/M
Ga0210097_1003369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium SG8_38_1	3661	Open in IMG/M
Ga0210097_1006333	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2585	Open in IMG/M
Ga0210097_1007164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2437	Open in IMG/M
Ga0210097_1009230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2161	Open in IMG/M
Ga0210097_1009770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina ovata	2101	Open in IMG/M
Ga0210097_1012943	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
Ga0210097_1014029	Not Available	1755	Open in IMG/M
Ga0210097_1015855	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	1650	Open in IMG/M
Ga0210097_1018877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1517	Open in IMG/M
Ga0210097_1019798	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
Ga0210097_1021091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1440	Open in IMG/M
Ga0210097_1022123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
Ga0210097_1025246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1321	Open in IMG/M
Ga0210097_1026927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1281	Open in IMG/M
Ga0210097_1028278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1252	Open in IMG/M
Ga0210097_1029619	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
Ga0210097_1032814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila	1164	Open in IMG/M
Ga0210097_1032909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1162	Open in IMG/M
Ga0210097_1038325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	1079	Open in IMG/M
Ga0210097_1038689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1074	Open in IMG/M
Ga0210097_1041700	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
Ga0210097_1043860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1011	Open in IMG/M
Ga0210097_1046638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	981	Open in IMG/M
Ga0210097_1054311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	910	Open in IMG/M
Ga0210097_1054867	Not Available	906	Open in IMG/M
Ga0210097_1056195	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
Ga0210097_1056460	Not Available	893	Open in IMG/M
Ga0210097_1058129	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	881	Open in IMG/M
Ga0210097_1058171	All Organisms → cellular organisms → Bacteria → FCB group	880	Open in IMG/M
Ga0210097_1058560	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
Ga0210097_1060025	Not Available	867	Open in IMG/M
Ga0210097_1062476	Not Available	850	Open in IMG/M
Ga0210097_1068926	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	809	Open in IMG/M
Ga0210097_1073460	Not Available	784	Open in IMG/M
Ga0210097_1074904	Not Available	777	Open in IMG/M
Ga0210097_1076201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	770	Open in IMG/M
Ga0210097_1081418	Not Available	745	Open in IMG/M
Ga0210097_1100178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	671	Open in IMG/M
Ga0210097_1105711	Not Available	654	Open in IMG/M
Ga0210097_1106605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → methanotrophic bacterial endosymbiont of Bathymodiolus sp.	651	Open in IMG/M
Ga0210097_1111213	Not Available	638	Open in IMG/M
Ga0210097_1114441	Not Available	629	Open in IMG/M
Ga0210097_1114657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	628	Open in IMG/M
Ga0210097_1118138	Not Available	619	Open in IMG/M
Ga0210097_1123645	Not Available	605	Open in IMG/M
Ga0210097_1125418	Not Available	601	Open in IMG/M
Ga0210097_1147408	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon	555	Open in IMG/M
Ga0210097_1154988	Not Available	541	Open in IMG/M
Ga0210097_1164642	Not Available	525	Open in IMG/M
Ga0210097_1165466	Not Available	523	Open in IMG/M
Ga0210097_1166385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
Ga0210097_1180080	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
Ga0210097_1180267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210097_1001728	Ga0210097_10017282	F071201	MCKGSFLMPVPKPKPEESEREYISRCEKFMHEENNDKPEGEKRSNQQISAICYSTWRKKS
Ga0210097_1002924	Ga0210097_10029245	F086688	LEKEILFEGKESTSSVKIKEFNSQGASLEISLKGKVIGKIEGFILSTHTILMKWDRTSEVEIKSIIFSNGEPIFISGKDAGKVIDPTPTGKIEGNLTFQTPSQRLSYLNSAKGWTEALYNIATGEYNFKVYTVK
Ga0210097_1003369	Ga0210097_10033692	F029006	MNKIIIVLMAIYFLGDPHLQYLSWLGDMKLYVVAAAIALVSMPWIAEQLDG
Ga0210097_1006333	Ga0210097_10063334	F008498	VERTLANVTYKNQPAIDKTKGNVPLAGTSHIYRVKKRLWNDSIEDVLRELFIGKTLHVCCGKSALGDVRIDADPENKPDIICDAANMTAYVTDGMFETVLCDPPYNGQFQWNHDLLRELARVASKRIIFQHWFIPANPDGRYKKAQERFALSDLLVWQPKTYFGRVQVVSVFDAT
Ga0210097_1007164	Ga0210097_10071642	F063813	MSLVQWSQAHGQKLKPTELESNAQPLAKPSPSSKKPAHQFDSRTGSAPIDETKTIERGLS
Ga0210097_1009230	Ga0210097_10092301	F050465	MDSYPFMIAEATLLFLAVVLIIESAFRRREVGRQLAENKRIEHQLATYSAELNALNRKLARKSEIADQFPRITKKMTEKFPPDAYPAIAVRSAKNFFTAEKVGYFAPTEDSSDYTLVVGVGFPLDWTGKVRIHSDEGILGMALQKKTTVSRRD
Ga0210097_1009770	Ga0210097_10097704	F045104	MMAQHAPRPRPAPSSNAPACCGLWSGPRRSAAVLFDPLTQRQLTLSLANTAPAHTTLLDWLAEQSAHLVIPDTLLALPCLNQASQTPVAVWVAPSALLEAIRLAAGLTTRAPKHTAALLARWPSAPALRPFLRRLAASPHPHQLALL
Ga0210097_1012943	Ga0210097_10129432	F057476	MNEDLDPIEPSPESLAELPEQDFSRGIRPNRYANLRGAFKYAVFLDRDLWEHFGSEQRVIEALRLLVDLAQKRSA
Ga0210097_1014029	Ga0210097_10140292	F085725	SMNLLFVTIFLLITAVAVGLYLVFLGLRKHKRSPRLGLTHASLALAGIIALFTLIFTGPTDKLNNGAALILFFAILGGGIVFALHEESKPPSMIAVAIHAIMGMTGLSLLMTHLF
Ga0210097_1015855	Ga0210097_10158552	F034003	MKKRRKRNPSLKKTNQLSFDFSLNDPIEIHTPKSNISDLRRELAWEHRPIIEIVKS
Ga0210097_1018877	Ga0210097_10188772	F082105	MFIVPMAAPTMHEPPHYAEQPNVTVQRAVAGTVMRIDSVGSGRVNEKK
Ga0210097_1019798	Ga0210097_10197981	F002422	MQNMETLLLRATPFVAAPTARPGSGGSMEKTEKAKASV
Ga0210097_1021091	Ga0210097_10210913	F029006	VNKIIIGLMAIYFLGDPDLQYLSWLGDLKIYVVAAALSLVSMPWIAEQLDG
Ga0210097_1022123	Ga0210097_10221232	F105195	MTVSLIWSLMDTQPPRLITSDKRVIDLSETDPAIWSSYLSEENKRRVLAAVRRWETAITAGANAIESHGYAVSGIGVDYQTWLANEGESCSS
Ga0210097_1025246	Ga0210097_10252461	F102142	MTNKVTKSNDLLKASLFGILVVFITVIPFEQFVAQFAGLSYDQFRGGMPTLYLLPLFLIYAALGLVLARMKQNLNIGKRGAFLIIFAFHYIIVSFLGNIEGLIYLPDFTFLSATISGLILAGAVVGLIFYLWKQDENPDAKPGEQIKSHFSSRSVLSWIWRFFLVWISFYIVTMILGIVATPFNGSYYEDPMNTLGMVVPSMGTFFAITQFRSLIYILVILPFIIFWNSSKRASFLYVALSLIIQYPLLGDGLAYFWPAMYRLVDGIVLALQVTIMS
Ga0210097_1026927	Ga0210097_10269272	F082105	MSIALTAALIWRDPPRCAERPNATVQRAVAGTVMRIDSAGSGRVSEKK
Ga0210097_1028278	Ga0210097_10282782	F072487	MFPKEYKYILGVGFILFGFFALKFSEYQHPIYGYINLGKYHIYIGVACVLIGAFYIAHIRRENKK
Ga0210097_1029619	Ga0210097_10296191	F091594	MSENGITHYCLGNGETKCDGCKQEKNWQTLNQMPDALRKSLQANAQRIDDTDCILSGRRWRVEA
Ga0210097_1032814	Ga0210097_10328141	F041201	LVQDRGGVEFQTAGILRYVEDLKRGTNKDIGPKDIFVM
Ga0210097_1032909	Ga0210097_10329091	F016971	MNQVAQHLPAEEKCAVEVVVYIKKDLGEEQQKLVISALEQTNGIMGAEFCVMRNHLVLAKYDKDIMTSQDVLKSFNSLNLEARLIGP
Ga0210097_1038325	Ga0210097_10383251	F024001	MNGATAVKGSRKNLFTILGVEAPVGQGAKAQEYLDIPSFRNAAGRDASAYKM
Ga0210097_1038689	Ga0210097_10386892	F078289	MKKTAIILISLFIVVPLYGFNSLVRHEDIPKMRKLGISQEVIQYFISNQTSSVSSEDVIKMKQSGLNNDDILSAIKSDLYRPEQTSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESHRTQYPTTGATFPKLDNYGYDPSNGRFLFFVKPQNQE
Ga0210097_1041700	Ga0210097_10417001	F050940	SNLSDATGLVKSMGVEPGNIYWKRIDENLVNNGYQFKIGMNELFEGEVFASDERETCSFPGFHFTSRSWCSVNYSDRPYEAWIRIPEGAQINEPWATDGKASADKIDILQVFDTRTGEDVTDKFRN
Ga0210097_1043860	Ga0210097_10438602	F016971	MDKVVQLASNNEVKNVVEIVVHIKKYLEQEQRDHLVSQLKKTDGIIGAEFCPLRNHLVLAKYNKDIFSSQDVLKTFNSLSLEARLIGPI
Ga0210097_1046638	Ga0210097_10466382	F011939	MAKMTINMIEEALRTEVQKIDKSVQVVAIEPGKKKNLYRVTLLKEGKSGSADLQKDLVEQYLAQKGKGRLLRKALAKAVSHLSIRYGR
Ga0210097_1049033	Ga0210097_10490331	F097472	EKGIDKKKFSELQRIAREIQTSITSGNPCDVPDTLRQSLVSGTEALRDKTTSTGERDLIKAYSNLLTIYNDGLLLCKYRTALSQFQFVPKGRIYVTQELDPLVQKYDLSTASHVYRPTGAYWKSIPGDSIKVIWESAEFQLKTIENMVNYN
Ga0210097_1054311	Ga0210097_10543111	F104552	MAICKASTLFLSRFACCQVWALLLLLGLLIPSQAAEALKPDALPQAQATLERLEKQFATAQTVTAQELKTLRKEIATVRSSAQDCVQRAEPKIEILDSELAILQAAIPKDTQAKTAKETQPAEQPEAPVSPAIARQLQDLLSRKASLEGRMAVCKLMLLRSNDLESDVDDYLSSLQTRQLLARGPTLVSVLQANLDERKRWLDFTRQLAVTSTGWDAIRPVHLAGAAAVGLLGFIL
Ga0210097_1054867	Ga0210097_10548671	F105195	MGKPCPTPRCFLEPGVMVASQGGMVMTVLLVWPLMDLQSPRIITSDKHVIDLLETDPAIWVNHISEENQRRVITEVRRWQTAVEAGADATEAYGYAIGGIGVDFQAWLVKEKESCSG
Ga0210097_1056195	Ga0210097_10561951	F058543	METVTILASINEKKKAEFFQTMESLTGLVESQCNDLDIRVKDDNSLIIKITFDGKDQMERNFYNNEFNILKGSVKSLCENVIIKVNESLLNNN
Ga0210097_1056460	Ga0210097_10564601	F105195	MTVLLIWSLVDTQPPRLITSDKRVIDLSETDPAIWASYISEENKRRVLAAVRRWETAITAGANAMESHGYAVSGIGVDFQTWLANERESCSS
Ga0210097_1058129	Ga0210097_10581292	F058543	METVTICASINEKKKAEFFQTMEPLTGLVESQCNDLDIRVKDDNSLIIKITFDGKDQMERNFYTGEFNILKGSVKSLCQDVIIKVNESLVNNN
Ga0210097_1058171	Ga0210097_10581712	F078881	MSKKIINLFLIVVLLLILLLSGCGTGQFSVGVGVYVPGAWGGPYGGGYYPPVRVGYPVY
Ga0210097_1058560	Ga0210097_10585602	F089490	MTDGSDRTSHSSDKKLSMYRLMKSEKFTLDYLTSGLVSFYRQRQIKCFGRLSAALGACEVANNGGGSGYYLLNESGQEYYGGTWID
Ga0210097_1060025	Ga0210097_10600251	F089490	MYRLMMSERFTLDHLTSGLMSFYRQTQVECFQQFRAALRACEAANNGKSRYYLLNASGQEYYQGTWID
Ga0210097_1062476	Ga0210097_10624761	F077315	MVICKASTLYLSRFACFQVWALLLLLGLLIPSQAAEALKPDALSQAQATLKRLEQQLATAQATTAQELKTLRKEIATVRSSAQDCLQQAEPKIEILDSELDILQPAKPKDTQAKTAEETQ
Ga0210097_1068926	Ga0210097_10689262	F009862	MPKPKPEKPIVVRCPNCKKTNEPNYNETTNRYACPICNGPVDVQVIIEKKKRGGEKRRNW
Ga0210097_1073460	Ga0210097_10734601	F033045	SPCGAMSGLIAPDKLVSWAEEGHGDAIARLCRTVYERQVASINAWESDRMMQLEDEWMVAGNDEDMPGRKYVNVKHYHTTREDVAREAEQMRAAVKERMTEHQTAIEDLVQEARMFISACVAQQEDSDMLTYLFVIAVIVIAGYALFN
Ga0210097_1074904	Ga0210097_10749043	F029285	MKNEANYSLYKCPYSHIEKECGHELHGPEGYENTYGIWCPCGFRGPVFCLNPDDLKLEKKGV
Ga0210097_1076201	Ga0210097_10762012	F060656	VESDGSVRIAWLADGFEAIHVYARFRPSTEVAERALVVADVALTNRTVHDLRRGLRARFGGAFQLQAPDEDAPDRRIAIFFDPPAGNPNPDD
Ga0210097_1081418	Ga0210097_10814181	F056715	QRRLGITMQEFRRVRVAIDSLIDEAKESIQKKSLSESMEHLERARGLIEELKQMSTTDQADIVAKRETTVASLTDIAGNLKKPAVKKRKTKETIVQAATL
Ga0210097_1100178	Ga0210097_11001781	F038726	PINTNAGAAPGERTAECHVAVSTDGGNTFHDTDLMPILREHTDPSLPTEPAPGLYYCNWSWVSIGDDRTIYAGGAMFTPLGDIGWSGRPSTAPKQGRAMVTVSRDDGQSWSPTTVGIKVANFAPGLTGLGCSTARPCVSTPAGTDPWHTPWDNAMGVAAPRSATFYSMAGGYVVASEDRAQTFGTVYQVDVPGWTFSRGKIDASADMLVAPIIASSTPLGASC
Ga0210097_1105711	Ga0210097_11057111	F086467	SAADGINNARYLYIAAVVGTCGLKLSDLKLIDLANQPLVKAGIAGQVHTGVFHVDELAQVEFKTGKKWRLIEAPPAIKAGLHYAMLIASKKAIAENREGLVRYLEGWILTQKMMGSKSPADKVAFATVASNASKIDFQVALSAIDAYQSIGYWVNNDGLDEKQMMSQLSELVKIGSVKAAQKPTYDRIVDKSIYAEAFKRVEAKFGKVE
Ga0210097_1106605	Ga0210097_11066051	F097602	VTILPSEGPSDLGRCNCDTLSPKRNSNVGVMNRGSTDEAVVIVKFGANEFMVTWRRVKHRISDRMLEVKGGTCKRPWPLIIDRRTEISLTGVVDYLRRKQ
Ga0210097_1111213	Ga0210097_11112131	F058158	TMKDRENRIDKRIVDQKNYKPDFTKTEKADIDIWDLNRKEREHMLTQIAKYRYKNRIRDWIELIFMLGFICYMLYDIYKDGV
Ga0210097_1114441	Ga0210097_11144411	F092312	MPAQGRLSIPTCSGKEREMMGRGGWKTALGILAAGVTLLGCFAPVIYGVYKVYDLGKQQVIALRIMEGPEKVYKTSIAVAEERGAKITARNDKELHFSVKSKDGLDGTVKVSTLPKGGSLLTLTMEKGKDPKAEREAIVSSVLSVCSKFGTQCTEEKEMQ
Ga0210097_1114657	Ga0210097_11146571	F039551	MANRSWRSHDIELEYAFDRLQATKLEQAFAILVPNRERRIDESTGLLKRESHENSR
Ga0210097_1118138	Ga0210097_11181381	F002422	MQNMETLLLRATLFVAAPTARPGSGDSMEKTEEAKAGA
Ga0210097_1123645	Ga0210097_11236452	F029006	MNKVIIALMAIYFIGDPGLQYLAWLGELKMYIVAAAIALVSMPWIAEQLDG
Ga0210097_1125418	Ga0210097_11254182	F013130	TKDKRRRTTVVPVTTMEEIPVHSDAERADLLTSLQDAEARMKAGQGVDFDPKTFKARLVN
Ga0210097_1147408	Ga0210097_11474082	F029273	MDIDPITKELLESLLQEVPKRTSRTIVSRNTKIKRATGQLSAIAARDKNDPLYKRMVFYREKYYKYRAMIHKKYSPRVR
Ga0210097_1154988	Ga0210097_11549881	F078289	DPMKKAVSIFILIFIVFPLYGFNSLVRHEDIPKMRELGISQEVIQYFISNQTSSVSSEDVIKMKQSGLNNNDIMSAIKSDLYRSEQKSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSMQRIDSDGNVTKQYTNESQRTPYPTTGATFPKPDNYGYDPLNERFLLLVKPLNQ
Ga0210097_1164642	Ga0210097_11646421	F023130	PPGDFPSAGGRMTRRFWVPATALLLSSILVMTGSISHDAMAGIFVLSQSSGSSIVEGEGPATMKMGPAEEFETHSQRDVSSRYWMRGIVLLILILLILWLIYRTFTGWKPMISRSVGFLPELQA
Ga0210097_1165466	Ga0210097_11654661	F015489	VVHRHGCYERYADPEETLEERIQRYLCSPCGRTFSVLPPHRLPYRSVRAERLQGYFDQRAGIQAQGLDPPPRVVEAGCLRRAWSALTARVATLKEALGQLVSSTVSDGASFWASVRQSFSSVPKMLCFLSEHHRISLLGNYCCLR
Ga0210097_1166385	Ga0210097_11663851	F016664	MNQATNRVPTTHESSNAVEIVVHVSENLEDQQRRDLVAALEQEDGIVSAEFCPLRYHLMLVKYDRHQYSSQDVLRAVGTQKIQARLIGPI
Ga0210097_1180080	Ga0210097_11800802	F045768	MILKNRLHDSRAMTAAGMFCLATGIVAQRFIHPPTDFWQGFVAGLSGVLIGLSIVFNLRGLSLRRTQRSIGD
Ga0210097_1180267	Ga0210097_11802671	F048676	MLFRYIRLCGTASDGVDAVKLEIPQGFKLLKFKMSEYLKNIVKLTISII

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025801: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences