Metagenome / Metatranscriptome Family F101010

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101010
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	109 residues
Representative Sequence	MFIIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Number of Associated Samples	55
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.43 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	54.90 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.490 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (51.961 % of family members)
Environment Ontology (ENVO)	Unclassified (95.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.55% β-sheet: 50.91% Coil/Unstructured: 44.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF16784	HNHc_6	23.53
PF01807	zf-CHC2	16.67
PF12684	DUF3799	7.84
PF13662	Toprim_4	5.88
PF07733	DNA_pol3_alpha	3.92
PF13154	DUF3991	3.92
PF03796	DnaB_C	2.94
PF02811	PHP	2.94
PF13155	Toprim_2	2.94
PF14579	HHH_6	2.94
PF04404	ERF	2.94
PF06147	DUF968	2.94
PF00772	DnaB	1.96
PF13597	NRDD	0.98
PF14239	RRXRR	0.98
PF01464	SLT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	16.67
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	4.90
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	3.92
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	3.92
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.47 %
Unclassified	root	N/A	23.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.49 %
Unclassified	root	N/A	23.53 %
Viruses	superkingdom	All Organisms → Viruses	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.49 %
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.67 %
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	66.67 %
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	43.14 %
Unclassified	root	N/A	23.53 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	42.16 %
Unclassified	root	N/A	23.53 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	5.88 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2.94 %
Carnobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Carnobacteriaceae	0.98 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Ruminococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus	2.94 %
unclassified Lachnospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae	1.96 %
Carnobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Carnobacteriaceae → Carnobacterium	0.98 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Ruminococcus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	2.94 %
Lachnospiraceae bacterium A4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium A4	1.96 %
Carnobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Carnobacteriaceae → Carnobacterium	0.98 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2044078008\|2044943897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3527	Open in IMG/M
3300000494\|AAW_1008820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	1951	Open in IMG/M
3300000510\|Foulum_1013393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	2144	Open in IMG/M
3300002163\|JGI24707J26582_10172500	Not Available	579	Open in IMG/M
3300002164\|JGI24708J26588_10206903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	504	Open in IMG/M
3300002166\|JGI24713J26584_10030047	Not Available	1617	Open in IMG/M
3300002167\|JGI24714J26587_10034010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1576	Open in IMG/M
3300002167\|JGI24714J26587_10064642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	862	Open in IMG/M
3300002168\|JGI24712J26585_10145274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	715	Open in IMG/M
3300002898\|draft_10083766	Not Available	2395	Open in IMG/M
3300002918\|JGI26049J44785_1005640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3992	Open in IMG/M
3300004634\|Ga0066906_10004957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6751	Open in IMG/M
3300005407\|Ga0074248_1063323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	3195	Open in IMG/M
3300005407\|Ga0074248_1089364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	2313	Open in IMG/M
3300006674\|Ga0101770_1008494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6456	Open in IMG/M
3300006674\|Ga0101770_1031296	All Organisms → cellular organisms → Bacteria	3056	Open in IMG/M
3300006674\|Ga0101770_1072812	All Organisms → Viruses → Predicted Viral	2636	Open in IMG/M
3300009095\|Ga0079224_101747668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	883	Open in IMG/M
3300009648\|Ga0116175_1012600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3761	Open in IMG/M
3300009648\|Ga0116175_1083593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1137	Open in IMG/M
3300009653\|Ga0116169_1177594	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009653\|Ga0116169_1280494	Not Available	545	Open in IMG/M
3300009653\|Ga0116169_1292801	Not Available	532	Open in IMG/M
3300009654\|Ga0116167_1047229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1799	Open in IMG/M
3300009654\|Ga0116167_1098706	Not Available	1078	Open in IMG/M
3300009655\|Ga0116190_1006873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7270	Open in IMG/M
3300009657\|Ga0116179_1017080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3840	Open in IMG/M
3300009657\|Ga0116179_1023256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3062	Open in IMG/M
3300009657\|Ga0116179_1200267	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009663\|Ga0116181_1345136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	533	Open in IMG/M
3300009668\|Ga0116180_1092752	Not Available	1310	Open in IMG/M
3300009711\|Ga0116166_1029296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2693	Open in IMG/M
3300009711\|Ga0116166_1101247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1151	Open in IMG/M
3300009711\|Ga0116166_1163240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	835	Open in IMG/M
3300009711\|Ga0116166_1164627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	830	Open in IMG/M
3300009711\|Ga0116166_1201016	Not Available	729	Open in IMG/M
3300009711\|Ga0116166_1277426	Not Available	592	Open in IMG/M
3300009712\|Ga0116165_1032013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2319	Open in IMG/M
3300009712\|Ga0116165_1034507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2205	Open in IMG/M
3300009712\|Ga0116165_1051731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1683	Open in IMG/M
3300009761\|Ga0116168_1063303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1057	Open in IMG/M
3300009761\|Ga0116168_1082193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	889	Open in IMG/M
3300009761\|Ga0116168_1160958	Not Available	576	Open in IMG/M
3300010267\|Ga0134101_1082723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Carnobacteriaceae → Carnobacterium	536	Open in IMG/M
3300010273\|Ga0134096_1002388	Not Available	12381	Open in IMG/M
3300010276\|Ga0134104_1092438	Not Available	523	Open in IMG/M
3300010277\|Ga0134093_1003497	Not Available	11011	Open in IMG/M
3300010277\|Ga0134093_1079788	Not Available	567	Open in IMG/M
3300010281\|Ga0134090_1003202	All Organisms → cellular organisms → Bacteria	7782	Open in IMG/M
3300010281\|Ga0134090_1010764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3018	Open in IMG/M
3300010281\|Ga0134090_1049392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	889	Open in IMG/M
3300010281\|Ga0134090_1052556	Not Available	847	Open in IMG/M
3300010285\|Ga0134091_1003008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	10673	Open in IMG/M
3300010285\|Ga0134091_1037230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1121	Open in IMG/M
3300010286\|Ga0134092_1025061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1599	Open in IMG/M
3300010286\|Ga0134092_1043687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1017	Open in IMG/M
3300010286\|Ga0134092_1063009	Not Available	768	Open in IMG/M
3300010327\|Ga0116246_10011464	Not Available	5483	Open in IMG/M
3300010327\|Ga0116246_10059981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1762	Open in IMG/M
3300010327\|Ga0116246_10068382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1625	Open in IMG/M
3300010338\|Ga0116245_10035583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3611	Open in IMG/M
3300010340\|Ga0116250_10065198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2541	Open in IMG/M
3300010340\|Ga0116250_10216563	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300010340\|Ga0116250_10564882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	637	Open in IMG/M
3300012949\|Ga0153798_10125435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium A4	1092	Open in IMG/M
3300012949\|Ga0153798_10173509	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012949\|Ga0153798_10272556	Not Available	557	Open in IMG/M
3300012949\|Ga0153798_10276981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	550	Open in IMG/M
3300012949\|Ga0153798_10297421	Not Available	520	Open in IMG/M
3300014206\|Ga0172377_10860807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	707	Open in IMG/M
3300019218\|Ga0179954_1153928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	661	Open in IMG/M
3300019235\|Ga0179952_1039187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	574	Open in IMG/M
3300019243\|Ga0179953_1042661	Not Available	579	Open in IMG/M
3300019243\|Ga0179953_1202589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	540	Open in IMG/M
3300025471\|Ga0209508_1010040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3660	Open in IMG/M
3300025471\|Ga0209508_1010236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3592	Open in IMG/M
3300025471\|Ga0209508_1015990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2416	Open in IMG/M
3300025471\|Ga0209508_1043411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1033	Open in IMG/M
3300025534\|Ga0207747_1003350	All Organisms → cellular organisms → Bacteria	7751	Open in IMG/M
3300025534\|Ga0207747_1005921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4444	Open in IMG/M
3300025587\|Ga0208938_1001748	All Organisms → cellular organisms → Bacteria	12246	Open in IMG/M
3300025589\|Ga0209409_1011399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3816	Open in IMG/M
3300025589\|Ga0209409_1013632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3309	Open in IMG/M
3300025589\|Ga0209409_1021200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2344	Open in IMG/M
3300025605\|Ga0209720_1017274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3177	Open in IMG/M
3300025609\|Ga0209608_1006801	Not Available	5483	Open in IMG/M
3300025609\|Ga0209608_1009944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	3989	Open in IMG/M
3300025613\|Ga0208461_1001614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	19931	Open in IMG/M
3300025618\|Ga0208693_1003421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	9866	Open in IMG/M
3300025631\|Ga0209204_1169464	Not Available	538	Open in IMG/M
3300025657\|Ga0208823_1002326	All Organisms → cellular organisms → Bacteria	14357	Open in IMG/M
3300025657\|Ga0208823_1009256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5689	Open in IMG/M
3300025683\|Ga0208564_1066356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1290	Open in IMG/M
3300027510\|Ga0209537_1016907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3670	Open in IMG/M
3300027510\|Ga0209537_1022827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2767	Open in IMG/M
3300027510\|Ga0209537_1036290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium A4	1779	Open in IMG/M
3300027510\|Ga0209537_1043237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1502	Open in IMG/M
3300027510\|Ga0209537_1101233	Not Available	670	Open in IMG/M
3300028602\|Ga0265294_10550446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	690	Open in IMG/M
3300033986\|Ga0310138_006374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4045	Open in IMG/M
3300033998\|Ga0310133_002358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	11764	Open in IMG/M
3300034685\|Ga0310149_000949	Not Available	25788	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	95.10%
Environmental	Environmental	4.90%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	52.94%
Bioreactor	Engineered → Bioreactor	22.55%
Biotransformation	Engineered → Biotransformation	13.73%
Terrestrial	Environmental → Terrestrial	3.92%
Lab Enrichment	Engineered → Lab Enrichment	3.92%
Aquatic	Environmental → Aquatic	0.98%
Solid Waste	Engineered → Solid Waste	0.98%
Unclassified	Engineered → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	51.96%
Unclassified	Engineered → Bioreactor → Unclassified	18.63%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	13.73%
Defined Media	Engineered → Lab Enrichment → Defined Media	3.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.94%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Soil	Environmental → Terrestrial → Soil	0.98%
Landfill	Engineered → Solid Waste → Landfill	0.98%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.98%
Unclassified	Engineered → Unclassified → Unclassified	0.98%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	51.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	18.63%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	13.73%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.94%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.98%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.98%
Dissolved Organics (Anaerobic)	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic)	0.98%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	51.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	18.63%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	13.73%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.94%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.98%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge	0.98%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	51.96%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	18.63%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	10.78%
Ionic Liquid And High Solid Enriched	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Ionic Liquid And High Solid Enriched	3.92%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.94%
Food Waste	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste	2.94%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Mixed Alcohol Bioreactor	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.98%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.98%
Anaerobic Digester	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Anaerobic Digester	0.98%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	0.98%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078008	Mixed alcohol bioreactor microbial communities from Texas A and M University - 55C, Day 16	Engineered	Open in IMG/M
3300000494	Anaerobic digester microbial communities from Northern Denmark, sample from West Aalborg sludge	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300002918	High solid enriched microbial communities from the Joint BioEnergy Institute, USA - SP1-1-D	Engineered	Open in IMG/M
3300004634	High solid enriched microbial communities from the Joint BioEnergy Institute, USA - SP1-1D-10D	Engineered	Open in IMG/M
3300005407	Mixed alcohol bioreactor microbial communities from Texas A and M University - 55C, Day 16	Engineered	Open in IMG/M
3300006674	Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway. Combined Assembly of Gp0117115, Gp0124038	Engineered	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009648	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG	Engineered	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009654	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009711	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009761	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG	Engineered	Open in IMG/M
3300010267	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 12_48_3.3_201_A2 metaG	Engineered	Open in IMG/M
3300010273	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 7_21_20_110_A3 metaG	Engineered	Open in IMG/M
3300010276	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 15_59_3.3_214_A2 metaG	Engineered	Open in IMG/M
3300010277	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 4_13_20_68_A1 metaG	Engineered	Open in IMG/M
3300010281	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 1_4_20_6_A1 metaG	Engineered	Open in IMG/M
3300010285	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 2_5_20_6_A2 metaG	Engineered	Open in IMG/M
3300010286	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 3_6_20_6_A3 metaG	Engineered	Open in IMG/M
3300010327	AD_CNMVca	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300012949	Switchgrass enrichment cultures co-assembly	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300019218	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019235	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR1_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019243	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025471	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025534	High solid enriched microbial communities from the Joint BioEnergy Institute, USA - SP1-1-D (SPAdes)	Engineered	Open in IMG/M
3300025587	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025589	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025605	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025609	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025631	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300033986	Fracking water microbial communities from deep shales in Oklahoma, United States - M2-7-3	Environmental	Open in IMG/M
3300033998	Fracking water microbial communities from deep shales in Oklahoma, United States - M1-7-1	Environmental	Open in IMG/M
3300034685	Fracking water microbial communities from deep shales in Oklahoma, United States - K-7-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2044995396	2044078008	Mixed Alcohol Bioreactor	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYLNVVIFDFENMSNSQTDNQMDDLPF
AAW_10088202	3300000494	Anaerobic Digester	MFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Foulum_10133932	3300000510	Anaerobic Digester	MILFNNVYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGENKKSFVNVVIFDFENLSNSQSESNDNFDDLPF*
JGI24707J26582_101725001	3300002163	Biogas Fermentantion	MFIIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSEKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
JGI24708J26588_102069031	3300002164	Biogas Fermentantion	VEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSEKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
JGI24713J26584_100300471	3300002166	Biogas Fermentantion	MILFNNAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGENKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
JGI24714J26587_100340102	3300002167	Biogas Fermentantion	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQIDSQMDDLPF*
JGI24714J26587_100646422	3300002167	Biogas Fermentantion	VKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
JGI24712J26585_101452741	3300002168	Biogas Fermentantion	MFVIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSEKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDL
draft_100837664	3300002898	Biogas Fermenter	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
JGI26049J44785_10056405	3300002918	Ionic Liquid And High Solid Enriched	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKIASGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0066906_100049572	3300004634	Ionic Liquid And High Solid Enriched	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSYLNVVIFDFENMSNSQTDNQMDDLPF*
Ga0074248_10633233	3300005407	Mixed Alcohol Bioreactor	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYLNVVIFDFENMSNSQTDNQMDDLPF*
Ga0074248_10893643	3300005407	Mixed Alcohol Bioreactor	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKESALALSTKDRIKITSGKISNTTTGDGKNKKTYTNVTIFEFENVNNNQDNMQNVPF*
Ga0101770_10084941	3300006674	Food Waste	MILFNNAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTIGEGEDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0101770_10312964	3300006674	Food Waste	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTIGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0101770_10728122	3300006674	Food Waste	MILFNNAYATVWSVEXKGNFVKGRISTSEKDRDGKYINSNWFAIFVGKAKEPALALSAKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFXDLPF*
Ga0079224_1017476681	3300009095	Agricultural Soil	MFIIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116175_10126004	3300009648	Anaerobic Digestor Sludge	MFGGFYMFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQQNESMDDLPF*
Ga0116175_10835932	3300009648	Anaerobic Digestor Sludge	IIRDAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGKDKKSFVSVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116169_11775942	3300009653	Anaerobic Digestor Sludge	FIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWSAIFVGKAKEPALALSTKDRIKIISGKINKTTTGEGEDRKSFVNVIIFDFENLSNSQNESNDNFDDLPF*
Ga0116169_12804942	3300009653	Anaerobic Digestor Sludge	MILFNNVYATVWEIDDKGNFAKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0116169_12928011	3300009653	Anaerobic Digestor Sludge	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKESALALSTKDRIKITSGKISNTTTGEGKNKKTYTNVTIFEFENVNNNQDNMQNVPF*
Ga0116167_10472293	3300009654	Anaerobic Digestor Sludge	MFGGFYMFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKINNTTIGEGEDRKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0116167_10987062	3300009654	Anaerobic Digestor Sludge	MFRVENAYATIWEVEDKGNFAKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKINNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116190_10068731	3300009655	Anaerobic Digestor Sludge	MILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTTIGEGKDKKSFVNVVIFDFVNMSNSQIDSQMDDLPF*
Ga0116179_10170802	3300009657	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116179_10232563	3300009657	Anaerobic Digestor Sludge	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNCYWFVTFVGKAKEPALALSTKDKIKITSGKISNTTTGEGKNKKTYTNITIFEFENVNNNQDNMQNVPF*
Ga0116179_12002671	3300009657	Anaerobic Digestor Sludge	GNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116181_13451362	3300009663	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQPNE
Ga0116180_10927523	3300009668	Anaerobic Digestor Sludge	MILFNNVYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0116166_10292963	3300009711	Anaerobic Digestor Sludge	WEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYVNVTIFDFESLNNSQTDSQMDELPF*
Ga0116166_11012471	3300009711	Anaerobic Digestor Sludge	MFGGFYMFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKITSGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0116166_11632402	3300009711	Anaerobic Digestor Sludge	MFRIENAFATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFATFVGKAKEPALALSTKDKIKITSGKISNTTTGDGKNKKTYTNVTIFEFENVNNNQDNMQNVPF*
Ga0116166_11646272	3300009711	Anaerobic Digestor Sludge	MFYINDAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSRMDRIKIISGKISNTTSGEGKDKKSYLNVVVFDFELANQENMQDVPF*
Ga0116166_12010161	3300009711	Anaerobic Digestor Sludge	MFRVENAYATIWEVEDKGNFAKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKINNTTTGEGKDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0116166_12774261	3300009711	Anaerobic Digestor Sludge	MILFNNVYATVWSVEDKGNYVKGRISTSEKNKEDKYVNSNWFVTFVGKAKEPALALSTKDRIKIISGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116165_10320132	3300009712	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVTFVGKAKEPALALSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116165_10345073	3300009712	Anaerobic Digestor Sludge	YFMILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSAKDRIKITSGKISNTTIGEGKDKKSFVNVVIFDFELANQENMQDVPF*
Ga0116165_10517312	3300009712	Anaerobic Digestor Sludge	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYVNVTIFDFESLNNSQTDSQMDELPF*
Ga0116168_10633031	3300009761	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKINNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDELPF*
Ga0116168_10821932	3300009761	Anaerobic Digestor Sludge	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKESALALSTKDRIKITSGKISNTTTGEGKNKKTYTNVTIFEFENVNNNQDDMQNVPF*
Ga0116168_11609581	3300009761	Anaerobic Digestor Sludge	MILFNNAYATVWSVEDKGNFVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTIGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDELPF*
Ga0134101_10827232	3300010267	Switchgrass Degrading	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNCYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKNKKTYTNITIFEFENVNNNQDNMQNVPF*
Ga0134096_10023883	3300010273	Switchgrass Degrading	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSHWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0134104_10924381	3300010276	Switchgrass Degrading	MFRIENAFATVWSVEDKGNYVKGRISTSEKNKEGKYVNSHWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYLNVVIFDFENMSNSQIDNQMDDLPF*
Ga0134093_10034977	3300010277	Switchgrass Degrading	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKETALTLSTKDRIKIISGKISNTTTGEGKDKKSYVNVTIFDFESLNNSQTDSQMDELPF*
Ga0134093_10797882	3300010277	Switchgrass Degrading	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTITGEGKDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0134090_10032021	3300010281	Switchgrass Degrading	MFIIRDGYETVWSVEDKGNFVKGRISTSEKNKDGKYINSNWFATFVGKAKEPALTLSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNLQSESNDNFDELPF*
Ga0134090_10107643	3300010281	Switchgrass Degrading	MFIIRDAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGKGKDKKSYVNVVVFDFELANQENMQDVPF*
Ga0134090_10493921	3300010281	Switchgrass Degrading	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKNGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0134090_10525561	3300010281	Switchgrass Degrading	MFIIRDAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVVFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0134091_100300813	3300010285	Switchgrass Degrading	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0134091_10372301	3300010285	Switchgrass Degrading	MFGGFYMFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQ
Ga0134092_10250613	3300010286	Switchgrass Degrading	IIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0134092_10436872	3300010286	Switchgrass Degrading	IIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0134092_10630092	3300010286	Switchgrass Degrading	GGFYMFIIRDGYATVWSVEDKGNFVKGRISTSEKDKNGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQDNFQPNESMDDLPF*
Ga0116246_100114642	3300010327	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWSAIFVGKAKEPALALSTKDRIKIISGKINKTTTGEGEDRKSFVNVIIFDFENLSNSQNESNDNFDDLPF*
Ga0116246_100599812	3300010327	Anaerobic Digestor Sludge	MILFNNVYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFATFVGKAKEPALALSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116246_100683822	3300010327	Anaerobic Digestor Sludge	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTITGEGENRKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0116245_100355833	3300010338	Anaerobic Digestor Sludge	MFIIRDAYATVWSVEDKGNFVRGRISTSEKGKDGKYINSNWFVIFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116250_100651982	3300010340	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0116250_102165631	3300010340	Anaerobic Digestor Sludge	RGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0116250_105648822	3300010340	Anaerobic Digestor Sludge	ILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNCYWFVTFVGKAKEPALALSTKDKIKITSGKISNTTTGEGKNKKTYTNITIFEFENVNNNQDNMQNVPF*
Ga0153798_101254353	3300012949	Switchgrass Degrading	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNCYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKNKKTYTNVTIFEFENVNNNQDNMQNVPF*
Ga0153798_101735092	3300012949	Switchgrass Degrading	MFGGFYMFIIRDGYATVWSVEDKGNFVKGRISTSEKNKDGKYINSNWFATFVGKAKEPALTLSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNLQSESNDNFDELPF*
Ga0153798_102725561	3300012949	Switchgrass Degrading	YNIGGFYMFIIRDGYATVWSVEDKGNFVKGRISTSEKDKNGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0153798_102769812	3300012949	Switchgrass Degrading	MFRIENAFATVWSVEDKGNYVKGRISTSEKNKEGKYVNSHWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
Ga0153798_102974212	3300012949	Switchgrass Degrading	LFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTITGEGKDKKSFVNVVIFDFENLSNSQIDSQMDDLPF*
Ga0172377_108608072	3300014206	Landfill Leachate	MILFNNVYATVWEIEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF*
Ga0179954_11539282	3300019218	Anaerobic Digestor Sludge	WEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYVNVTIFDFESLNNSQTDSQMDELPF
Ga0179952_10391871	3300019235	Anaerobic Digestor Sludge	MILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSAKDRIKITSGKISNTTIGEGKDKKSFVNVVIFDFELANQENMQDVPF
Ga0179953_10426612	3300019243	Anaerobic Digestor Sludge	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSYVNVTIFDFESLNNSQTDSQMDELPF
Ga0179953_12025891	3300019243	Anaerobic Digestor Sludge	MILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSHWFATFVGKAKEPALALSAKDRIKITSGKISNTTTGEGENKKSFVNVVIFDFENLSNSQIDSQMDDLPF
Ga0209508_10100402	3300025471	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKINNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDELPF
Ga0209508_10102362	3300025471	Anaerobic Digestor Sludge	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKESALALSTKDRIKITSGKISNTTTGEGKNKKTYTNVTIFEFENVNNNQDDMQNVPF
Ga0209508_10159902	3300025471	Anaerobic Digestor Sludge	MILFNNVYATVWEVEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTITGEGEDRKSFVNVVIFDFENLSNSQNNFQQNESMDDLPF
Ga0209508_10434112	3300025471	Anaerobic Digestor Sludge	MILFNNVYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFATFVGKAKEPALALSAKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0207747_10033509	3300025534	Ionic Liquid And High Solid Enriched	MFRIENAYATVWSVEDKGNYVKGRISTSEKNKEGKYVNSNWFVTFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSYLNVVIFDFENMSNSQTDNQMDDLPF
Ga0207747_10059214	3300025534	Ionic Liquid And High Solid Enriched	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKIASGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF
Ga0208938_10017482	3300025587	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQQNESMDDLPF
Ga0209409_10113991	3300025589	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKITSGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQIDSQMDDLPF
Ga0209409_10136322	3300025589	Anaerobic Digestor Sludge	MFIIRDAYATVWSVEDKGNFVRGRISTSEKGKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGENKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0209409_10212001	3300025589	Anaerobic Digestor Sludge	RYFMILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFVTFVGKAKEPALALSAKDRIKITSGKISNTTIGEGKDKKSFVNVVIFDFELANQENMQDVPF
Ga0209720_10172745	3300025605	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKINNTTIGEGEDRKSFVNVVIFDFENLSNSQIDSQMDDLPF
Ga0209608_100680110	3300025609	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWSAIFVGKAKEPALALSTKDRIKIISGKINKTTTGEGEDRKSFVNVIIFDFENLSNSQNESNDNFDDLPF
Ga0209608_10099442	3300025609	Anaerobic Digestor Sludge	MILFNNVYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTITGEGENRKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF
Ga0208461_10016142	3300025613	Anaerobic Digestor Sludge	MILFNNAYATVWEIEDKGNFVKGRISTSEKNKEGKYVNSYWFATFVGKAKEPALALSAKDRIKITSGKISNTTIGEGKDKKSFVNVVIFDFVNMSNSQIDSQMDDLPF
Ga0208693_10034216	3300025618	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0209204_11694641	3300025631	Anaerobic Digestor Sludge	MFIIRDAYATVWSVEDKGNFVRGRISTSEKGKDGKYINSNWFVIFVGKAKEPALALSTKDRIKITSGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPFXVRIFLVIKNQKREV
Ga0208823_100232630	3300025657	Anaerobic Digestor Sludge	MFIIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0208823_10092567	3300025657	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF
Ga0208564_10663561	3300025683	Anaerobic Digestor Sludge	MFVIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF
Ga0209537_10169077	3300027510	Biogas Fermentantion	MFVIRDGYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSTKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQIDSQMDDLPF
Ga0209537_10228273	3300027510	Biogas Fermentantion	MILFNNAYATVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0209537_10362903	3300027510	Biogas Fermentantion	KYNIGGFYMFIIRDAFATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVTFVGKAKEPALALSTKDRIKITSGKISNTTTGKGKDKKSYVNVVVFDFELVNQENMQDVPF
Ga0209537_10432371	3300027510	Biogas Fermentantion	MFIIRDGYATVWSVEDKGNFVKGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGENRKSFVNVVIFDFENLSNSQIDSQMDDLPF
Ga0209537_11012332	3300027510	Biogas Fermentantion	MILFNNAYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFVTFVGKAKEPALALSTKDRIKIISGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNNFQPNESMDDLPF
Ga0265294_105504462	3300028602	Groundwater	TVWSVEDKGNYVKGRISTSEKDKDGKYINSNWFVIFVGKAKEPALALSAKDRIKITSGKISNTTTGEGEDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF
Ga0310138_006374_3622_3957	3300033986	Fracking Water	MILFNNIYATVWSVEDKGNYVKGRISTSEKNKEGEYVNSNWFVTFVGKAKEPALALSTRDRIKIISGKISNTTTGEGKDKKSFVNVVIFDFEKLNTSNNNNATNDMDDLPF
Ga0310133_002358_3086_3418	3300033998	Fracking Water	MILFNNIYATVWSVEDKGNYVKGRISTSEKNKEGEYVNSNWFVTFVGKAKEPALALSTRDRIKIISGKISNTTTGEGKDKKSYLNVVVFDFENLSNSQNESNDNFDDLPF
Ga0310149_000949_17132_17464	3300034685	Fracking Water	MILFNNIYATVWSVEDKGNYVKGRISTSEKNKEGEYVNSNWFVTFVGKAKEPALALSTRDRIKIISGKISNTTTGEGKDKKSFVNVVIFDFENLSNSQNESNDNFDDLPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101010

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences