Metagenome / Metatranscriptome Family F047147

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047147
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	40 residues
Representative Sequence	VAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAGI
Number of Associated Samples	116
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.10 %
% of genes near scaffold ends (potentially truncated)	86.00 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.000 % of family members)
Environment Ontology (ENVO)	Unclassified (24.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.56% β-sheet: 0.00% Coil/Unstructured: 48.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00318	Ribosomal_S2	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0052	Ribosomal protein S2	Translation, ribosomal structure and biogenesis [J]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
All Organisms	root	All Organisms	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
cellular organisms	root	All Organisms → cellular organisms	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004475\|Ga0068969_1062796	Not Available	1530	Open in IMG/M
3300004606\|Ga0068962_1280842	Not Available	807	Open in IMG/M
3300005943\|Ga0073926_10081127	Not Available	650	Open in IMG/M
3300006227\|Ga0082386_105293	Not Available	676	Open in IMG/M
3300006234\|Ga0082394_103999	Not Available	592	Open in IMG/M
3300006235\|Ga0082395_1011114	Not Available	696	Open in IMG/M
3300006235\|Ga0082395_1011752	Not Available	1052	Open in IMG/M
3300006235\|Ga0082395_1021003	Not Available	715	Open in IMG/M
3300006235\|Ga0082395_1031190	Not Available	668	Open in IMG/M
3300007327\|Ga0075016_1426358	Not Available	501	Open in IMG/M
3300008568\|Ga0103784_1001629	Not Available	951	Open in IMG/M
3300009348\|Ga0103786_1005740	Not Available	857	Open in IMG/M
3300009348\|Ga0103786_1007140	Not Available	771	Open in IMG/M
3300009355\|Ga0103788_1002370	Not Available	998	Open in IMG/M
3300009355\|Ga0103788_1003174	Not Available	900	Open in IMG/M
3300010086\|Ga0127496_1091926	Not Available	653	Open in IMG/M
3300010101\|Ga0127481_1071231	Not Available	664	Open in IMG/M
3300010104\|Ga0127446_1095215	Not Available	756	Open in IMG/M
3300010134\|Ga0127484_1017165	Not Available	922	Open in IMG/M
3300010895\|Ga0138113_172757	Not Available	1408	Open in IMG/M
3300011120\|Ga0150983_13592152	Not Available	1237	Open in IMG/M
3300012212\|Ga0150985_107273502	Not Available	831	Open in IMG/M
3300012212\|Ga0150985_107435916	Not Available	769	Open in IMG/M
3300012212\|Ga0150985_121506183	Not Available	1470	Open in IMG/M
3300012371\|Ga0134022_1112833	Not Available	596	Open in IMG/M
3300012372\|Ga0134037_1080148	Not Available	514	Open in IMG/M
3300012372\|Ga0134037_1215774	Not Available	1348	Open in IMG/M
3300012387\|Ga0134030_1146887	Not Available	755	Open in IMG/M
3300012406\|Ga0134053_1430879	Not Available	764	Open in IMG/M
3300012469\|Ga0150984_104927495	Not Available	589	Open in IMG/M
3300012469\|Ga0150984_120063497	Not Available	919	Open in IMG/M
3300016728\|Ga0181500_1511099	Not Available	731	Open in IMG/M
3300018635\|Ga0193376_1003724	Not Available	1144	Open in IMG/M
3300018745\|Ga0193000_1031944	Not Available	791	Open in IMG/M
3300018986\|Ga0193554_10363950	Not Available	545	Open in IMG/M
3300019010\|Ga0193044_10131350	Not Available	823	Open in IMG/M
3300019027\|Ga0192909_10041289	Not Available	947	Open in IMG/M
3300019037\|Ga0192886_10105467	Not Available	833	Open in IMG/M
3300019040\|Ga0192857_10028617	Not Available	1128	Open in IMG/M
3300019040\|Ga0192857_10043874	Not Available	1015	Open in IMG/M
3300019111\|Ga0193541_1037093	Not Available	838	Open in IMG/M
3300019189\|Ga0184585_151450	Not Available	556	Open in IMG/M
3300019233\|Ga0184645_1012870	Not Available	513	Open in IMG/M
3300019233\|Ga0184645_1073263	Not Available	4898	Open in IMG/M
3300019268\|Ga0181514_1001637	Not Available	818	Open in IMG/M
3300019268\|Ga0181514_1329398	Not Available	548	Open in IMG/M
3300019269\|Ga0184644_1649377	Not Available	806	Open in IMG/M
3300020081\|Ga0206354_11296615	Not Available	901	Open in IMG/M
3300021274\|Ga0210327_177935	Not Available	507	Open in IMG/M
3300021275\|Ga0210342_126262	Not Available	602	Open in IMG/M
3300021287\|Ga0210338_174347	Not Available	746	Open in IMG/M
3300021844\|Ga0210361_176590	Not Available	1228	Open in IMG/M
3300021855\|Ga0213854_1136822	Not Available	873	Open in IMG/M
3300021951\|Ga0222624_1351487	Not Available	813	Open in IMG/M
3300022365\|Ga0210322_108082	Not Available	605	Open in IMG/M
3300022366\|Ga0210344_104511	Not Available	920	Open in IMG/M
3300022500\|Ga0242643_103785	Not Available	925	Open in IMG/M
3300022508\|Ga0222728_1118825	Not Available	516	Open in IMG/M
3300022525\|Ga0242656_1057253	Not Available	689	Open in IMG/M
3300022530\|Ga0242658_1070306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300022597\|Ga0215185_1005111	Not Available	1480	Open in IMG/M
3300030528\|Ga0210277_10905671	Not Available	542	Open in IMG/M
3300030529\|Ga0210284_1056797	Not Available	863	Open in IMG/M
3300030540\|Ga0247649_1014398	Not Available	743	Open in IMG/M
3300030543\|Ga0210289_1093953	Not Available	531	Open in IMG/M
3300030543\|Ga0210289_1473516	Not Available	862	Open in IMG/M
3300030547\|Ga0247656_1078396	Not Available	686	Open in IMG/M
3300030552\|Ga0247654_1013948	Not Available	942	Open in IMG/M
3300030552\|Ga0247654_1190650	Not Available	524	Open in IMG/M
3300030554\|Ga0247640_1142999	Not Available	586	Open in IMG/M
3300030554\|Ga0247640_1193480	Not Available	520	Open in IMG/M
3300030555\|Ga0247618_1031844	Not Available	796	Open in IMG/M
3300030569\|Ga0247628_1160826	Not Available	624	Open in IMG/M
3300030572\|Ga0210258_10979006	Not Available	669	Open in IMG/M
3300030576\|Ga0247644_1073424	Not Available	704	Open in IMG/M
3300030579\|Ga0247633_10181774	Not Available	607	Open in IMG/M
3300030585\|Ga0247639_1003917	Not Available	1528	Open in IMG/M
3300030594\|Ga0210280_1146120	Not Available	563	Open in IMG/M
3300030599\|Ga0247630_1175011	Not Available	556	Open in IMG/M
3300030600\|Ga0247659_1174262	Not Available	550	Open in IMG/M
3300030601\|Ga0247650_1043318	Not Available	701	Open in IMG/M
3300030607\|Ga0247615_10350620	Not Available	536	Open in IMG/M
3300030608\|Ga0247651_10243745	Not Available	572	Open in IMG/M
3300030610\|Ga0247613_10029849	Not Available	1165	Open in IMG/M
3300030621\|Ga0247655_10035973	Not Available	939	Open in IMG/M
3300030621\|Ga0247655_10040002	Not Available	916	Open in IMG/M
3300030628\|Ga0247629_10020319	Not Available	1294	Open in IMG/M
3300030628\|Ga0247629_10052406	Not Available	1032	Open in IMG/M
3300030628\|Ga0247629_10082329	Not Available	910	Open in IMG/M
3300030628\|Ga0247629_10127472	Not Available	794	Open in IMG/M
3300030628\|Ga0247629_10170065	Not Available	720	Open in IMG/M
3300030633\|Ga0247623_10163359	Not Available	641	Open in IMG/M
3300030634\|Ga0247636_10368933	Not Available	502	Open in IMG/M
3300030635\|Ga0247627_10006506	Not Available	1290	Open in IMG/M
3300030635\|Ga0247627_10346121	Not Available	510	Open in IMG/M
3300030738\|Ga0265462_10647536	Not Available	818	Open in IMG/M
3300030740\|Ga0265460_10708002	Not Available	857	Open in IMG/M
3300030777\|Ga0075402_10174564	Not Available	973	Open in IMG/M
3300030777\|Ga0075402_10177497	Not Available	597	Open in IMG/M
3300030779\|Ga0075378_10026000	Not Available	609	Open in IMG/M
3300030844\|Ga0075377_10110564	Not Available	861	Open in IMG/M
3300030846\|Ga0075403_10103594	Not Available	559	Open in IMG/M
3300030850\|Ga0075387_10064474	Not Available	617	Open in IMG/M
3300030851\|Ga0075380_10021361	Not Available	534	Open in IMG/M
3300030851\|Ga0075380_11389502	Not Available	528	Open in IMG/M
3300030853\|Ga0075372_10075222	Not Available	1837	Open in IMG/M
3300030853\|Ga0075372_10124216	Not Available	513	Open in IMG/M
3300030853\|Ga0075372_11082677	Not Available	629	Open in IMG/M
3300030887\|Ga0265733_102441	Not Available	657	Open in IMG/M
3300030920\|Ga0102762_1691042	Not Available	578	Open in IMG/M
3300030922\|Ga0138300_1250300	Not Available	797	Open in IMG/M
3300030922\|Ga0138300_1313762	Not Available	1556	Open in IMG/M
3300030934\|Ga0075391_10027119	Not Available	575	Open in IMG/M
3300030939\|Ga0138303_1040643	Not Available	613	Open in IMG/M
3300030939\|Ga0138303_1043961	Not Available	680	Open in IMG/M
3300030939\|Ga0138303_1078332	Not Available	575	Open in IMG/M
3300030939\|Ga0138303_1504899	Not Available	580	Open in IMG/M
3300030966\|Ga0075383_10040739	Not Available	870	Open in IMG/M
3300030971\|Ga0075375_10095630	Not Available	858	Open in IMG/M
3300030988\|Ga0308183_1043637	Not Available	875	Open in IMG/M
3300031000\|Ga0074035_10979755	Not Available	762	Open in IMG/M
3300031016\|Ga0265732_105442	Not Available	502	Open in IMG/M
3300031021\|Ga0102765_10085805	Not Available	1097	Open in IMG/M
3300031057\|Ga0170834_110923614	Not Available	733	Open in IMG/M
3300031064\|Ga0102767_10063115	Not Available	1057	Open in IMG/M
3300031064\|Ga0102767_10084146	Not Available	565	Open in IMG/M
3300031089\|Ga0102748_10017827	Not Available	647	Open in IMG/M
3300031100\|Ga0308180_1007293	Not Available	911	Open in IMG/M
3300031446\|Ga0170820_11898928	Not Available	569	Open in IMG/M
3300031505\|Ga0308150_1035381	Not Available	572	Open in IMG/M
3300031683\|Ga0308006_10011007	Not Available	2842	Open in IMG/M
3300031791\|Ga0316034_106242	Not Available	577	Open in IMG/M
3300031808\|Ga0316037_118362	Not Available	523	Open in IMG/M
3300032756\|Ga0315742_12034045	Not Available	641	Open in IMG/M
3300034659\|Ga0314780_003101	Not Available	2063	Open in IMG/M
3300034659\|Ga0314780_199312	Not Available	522	Open in IMG/M
3300034660\|Ga0314781_081536	Not Available	626	Open in IMG/M
3300034660\|Ga0314781_153489	Not Available	500	Open in IMG/M
3300034662\|Ga0314783_023221	Not Available	1020	Open in IMG/M
3300034663\|Ga0314784_026212	Not Available	949	Open in IMG/M
3300034664\|Ga0314786_023826	Not Available	1004	Open in IMG/M
3300034665\|Ga0314787_014750	Not Available	1059	Open in IMG/M
3300034676\|Ga0314801_040619	Not Available	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.00%
Aquatic	Environmental → Aquatic	25.33%
Plants	Host-Associated → Plants	4.00%
Invertebrates	Host-Associated → Invertebrates	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.00%
Marine	Environmental → Aquatic → Marine	14.67%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.33%
Cnidaria	Host-Associated → Invertebrates → Cnidaria	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.00%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Loam	Environmental → Terrestrial → Soil → Loam	0.67%
Sand	Environmental → Terrestrial → Soil → Sand	0.67%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.00%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Microbial Mats	4.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.67%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.33%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.00%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Microbial Mats → Microbial Mats	4.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.33%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.33%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.67%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003574	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004606	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005943	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14	Environmental	Open in IMG/M
3300006227	Marine sediment microbial communities, 10.1 km from oil contamination, ambient, Gulf of Mexico ? BC101	Environmental	Open in IMG/M
3300006234	Marine sediment microbial communities, 1.1 km from oil contamination, elevated hydrocarbon, Gulf of Mexico ? BC366	Environmental	Open in IMG/M
3300006235	Marine sediment microbial communities, 33.9 km from oil contamination, ambient, Gulf of Mexico ? BC463	Environmental	Open in IMG/M
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008568	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone1_total_RNA	Environmental	Open in IMG/M
3300009348	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone2_total_RNA	Environmental	Open in IMG/M
3300009355	Microbial communities of thrombolites from Highborne Cay, Bahamas - Zone3_total_RNA	Environmental	Open in IMG/M
3300010086	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010895	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018635	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_122 - TARA_N000001943 (ERX1782126-ERR1712207)	Environmental	Open in IMG/M
3300018745	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_110 - TARA_N000001746 (ERX1782385-ERR1712134)	Environmental	Open in IMG/M
3300018986	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000596	Environmental	Open in IMG/M
3300019010	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001428 (ERX1809462-ERR1739838)	Environmental	Open in IMG/M
3300019027	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_070 - TARA_N000000678 (ERX1782477-ERR1711924)	Environmental	Open in IMG/M
3300019037	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000703 (ERX1782146-ERR1712183)	Environmental	Open in IMG/M
3300019040	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_065 - TARA_N000000963 (ERX1782167-ERR1712154)	Environmental	Open in IMG/M
3300019111	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_153 - TARA_N000002817 (ERX1782321-ERR1712210)	Environmental	Open in IMG/M
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021274	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.268 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021275	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.429 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021287	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.380 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021844	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.595 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022365	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022366	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.437 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022597	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T3 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030540	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030543	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE107SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030547	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030552	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030554	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030555	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030569	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030572	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR103SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030576	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030579	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030585	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030594	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO089SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030599	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030600	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030601	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030607	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030610	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030621	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030628	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030633	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030634	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030846	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030850	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030851	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030853	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030887	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030920	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030922	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030934	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030971	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031000	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031016	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031021	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031064	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031089	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031505	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_139 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031683	Marine microbial communities from water near the shore, Antarctic Ocean - #69	Environmental	Open in IMG/M
3300031791	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031808	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007410J51695_10635781	3300003574	Avena Fatua Rhizosphere	LVFNKKKKIQQQENIILAVITDLVREEQFVYDLCLLGAVTVEITQILTRAGVILGHKYI*
Ga0068969_10627963	3300004475	Peatlands Soil	MAVIEGLVREEQPLHDLCLLGAMTMEITQILTRAGNIRT*
Ga0068962_12808422	3300004606	Peatlands Soil	QSTIIMAVIEGLVREEQPLHDLCLLGAMTMEITQILTRAGNIRT*
Ga0073926_100811271	3300005943	Sand	QSIIVAVTEGLVREEQLLHDMCLLSATTVEITQILTRAGP*
Ga0082386_1052931	3300006227	Marine	TIIVAVTEGPVREEQLLHDMCLLGAMTVEITQILTRAR*
Ga0082394_1039991	3300006234	Marine	AVTEGPVREEQLLHDMCLLGAMTVEITQILTRAR*
Ga0082395_10111141	3300006235	Marine	IVAVTEGLVREEQLLHDMWLLGAMTMEITQILTRARKTWT*
Ga0082395_10117521	3300006235	Marine	EGLVREEQLLHDMWLLGAVTVEITQILTRARNQPD*
Ga0082395_10210031	3300006235	Marine	VTEGLVREEQLLHDLCLLGAMTVEITQILTRVRTKYI*
Ga0082395_10311901	3300006235	Marine	KGLVREEQLLYDLCLLGTVTVEITQILTRTGTTWT*
Ga0075016_14263581	3300007327	Watersheds	MAVIEGLVREEQLLHDLCLLGAMTMEITQILTRAGNIRT*
Ga0103784_10016291	3300008568	Microbial Mats	MFLITFILAVTEGLVREEQLLHDLCLLGAVNAEIIQILTRAGLF*
Ga0103786_10026981	3300009348	Microbial Mats	VKLYPSIKYTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAGIYIGLKYI*
Ga0103786_10057401	3300009348	Microbial Mats	AVTEGLVREEQLLHDMCLLGAVTVEITQILTRAGIYYD*
Ga0103786_10071401	3300009348	Microbial Mats	EGLVREEQLLHDMCLLGAVTVEITQILTRAGIYIGLKYI*
Ga0103788_10023701	3300009355	Microbial Mats	MAVTKGLVREEQLLEDMCLLGSMTMEIAQILTLH*
Ga0103788_10031741	3300009355	Microbial Mats	AIIVAVTEGPVREEQLLHDLCLLGAVTVEITQILTRAGFA*
Ga0127496_10919261	3300010086	Grasslands Soil	VITDLVREEQFVYDLCLLGAVTVEITQILTRAGVILGHKYI*
Ga0127481_10712311	3300010101	Grasslands Soil	IIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT*
Ga0127446_10952151	3300010104	Grasslands Soil	AVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT*
Ga0127484_10171651	3300010134	Grasslands Soil	ANEGLVREEQLLHDMCLLGAGTVEITQILTRAGI*
Ga0138113_1727571	3300010895	Grasslands Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARTL*
Ga0150983_135921521	3300011120	Forest Soil	TITVAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGFF*
Ga0150985_1072735021	3300012212	Avena Fatua Rhizosphere	KDTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARKLT*
Ga0150985_1074359161	3300012212	Avena Fatua Rhizosphere	IIVAVTEGLVREEQLLHDMCLLGAMTVEITQILTRAGQIGPKYI*
Ga0150985_1215061831	3300012212	Avena Fatua Rhizosphere	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARNN*
Ga0134022_11128331	3300012371	Grasslands Soil	EGLVREEQLLHDMCLLGAVTVEITQILTRAGTLT*
Ga0134037_10801481	3300012372	Grasslands Soil	VTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT*
Ga0134037_12157742	3300012372	Grasslands Soil	AATEGLVREEQLLHDMCLLGAVTVEITQILTRAGVK*
Ga0134030_11468871	3300012387	Grasslands Soil	VAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAG
Ga0134053_14308791	3300012406	Grasslands Soil	YSADLVREEQFVYDLCLLGAVTVEITQILTRAGVILGHKYI*
Ga0134060_15359061	3300012410	Grasslands Soil	KKKIQQQENIILAVITDLVREEQFVYDLCLLGAVTVEITQILTRAGVILGHKYI*
Ga0150984_1049274951	3300012469	Avena Fatua Rhizosphere	IVAVTEGLVREEQLLHDLCLLGAMTMEITQMLTRAGFLT*
Ga0150984_1200634971	3300012469	Avena Fatua Rhizosphere	TCALPISEGLVREEQLLHDMCLLGAVTVEITQILTRAGVK*
Ga0181500_15110991	3300016728	Peatland	TTDLVREEQFVYDLCLLGAVTVEITQILTRAGLPTGHKYI
Ga0193376_10037241	3300018635	Marine	AIIVAVTEGPVREEQLLHDLCLLGAVTVEITQILTRAGLL
Ga0193000_10319441	3300018745	Marine	VTAIILAVTEGLVREEQLLHDLCLLGAVTVEITQILTRAGLF
Ga0193554_103639501	3300018986	Marine	NESPVREERFLHGKCILGTMTVEIAQILTRAGLCL
Ga0193044_101313501	3300019010	Marine	ESVREEHFLHDLCLLGAVKAEITQILTRAGCTRRKYI
Ga0192909_100412891	3300019027	Marine	HGLRTIIVAVTEGPVREEQLLHDMCLLGAVTVEITQILTRAGLL
Ga0192886_101054671	3300019037	Marine	AAIALAVTEGLVREEQLLHDLCLLGAVTVEITQILTRAG
Ga0192857_100286171	3300019040	Marine	IIVAVTEGPVREEQLLHDLCLLGAVTVEITQILTRAG
Ga0192857_100438741	3300019040	Marine	AIIVAVTEGPVREEQLLHDLCLLGAVTVEITQILTRAGFTLT
Ga0193541_10370931	3300019111	Marine	HGAIALAVTEGLVREEQLLHDLCLLGAVTVEITQILTRAG
Ga0184585_1514501	3300019189	Soil	IISAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGI
Ga0184645_10128701	3300019233	Groundwater Sediment	IIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAGKLT
Ga0184645_10732631	3300019233	Groundwater Sediment	VAVTEGLVREEQLLHDMCLLGAMTVEITQILTRAGQIGPKYI
Ga0181502_13167521	3300019242	Peatland	MHIKKTKNLIISAATTDLVREEQFVYDLCLLGAVTVEITQILTRAGLPTGHKYI
Ga0181514_10016371	3300019268	Peatland	SAATTDLVREEQFVYDLCLLGAVTVEITQILTRAGLPTGHKYI
Ga0181514_13293982	3300019268	Peatland	MAVTEGLVREEQLLHDSCLLGAMTMEITQILTRAGINRLEYI
Ga0184644_16493771	3300019269	Groundwater Sediment	AVTEGLVREEQLLHDMCLLGAVTVEITQILTRARLLT
Ga0206354_112966152	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAR
Ga0210327_1779351	3300021274	Estuarine	EGPVREEQLLHDMCLLGAMTVEITQILTRAGSKYV
Ga0210342_1262621	3300021275	Estuarine	LIYSVIIVAVTEGLVREEQLLHDMCILSTTTVEITQILTRAGPILGL
Ga0210338_1743471	3300021287	Estuarine	AIIVAVTEGPVREEQLLHDMCLLGAMTVEITQILTRAGSKYV
Ga0210361_1765901	3300021844	Estuarine	MAVIEGPVREEQLLHDVCLLGAMTMGTAQILTRVRQAYLNPS
Ga0213854_11368221	3300021855	Watersheds	MAAIEGLVREEQLLHDLCLLGAMTMEITQILTRAGNIRT
Ga0222624_13514872	3300021951	Groundwater Sediment	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARLLT
Ga0210322_1080821	3300022365	Estuarine	QPLSVIIVAVTEGLVREEQLLHDMCLLSATTVDITQTLTRAGQSF
Ga0210344_1045112	3300022366	Estuarine	MCVIIVAVTEGLVREEQLLHDMCLLSATTVEITQILTRAGPILGL
Ga0242643_1037851	3300022500	Soil	TAITDLVREEQFVYDLWLLGAMTMEITQILTRTGIYIGHKYI
Ga0222728_11188251	3300022508	Soil	VAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAGI
Ga0242656_10572531	3300022525	Soil	VTEGLVREEQLLHDLCLLGAMTMEITQILTRAGNNKGPEYI
Ga0242658_10703061	3300022530	Soil	FFKKIAIFVAANEGLVREEQLLHDMCLLGAVTVEITQILTRAGI
Ga0215185_10051111	3300022597	Coral	MCVIIVAVTEGLVREEQLLHDMCLLSATTVEITQILTRAGPKGLKYI
Ga0210277_109056711	3300030528	Soil	SAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGI
Ga0210284_10567971	3300030529	Soil	MAVIEGLVREEQPLHDLCLLGAMTMEITQILTRAGNIRT
Ga0247649_10143981	3300030540	Soil	ILAVITGLVREEQLVHDMCILGAVTVEITQILTRAGIFWT
Ga0210289_10939531	3300030543	Soil	ITITVAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGFLT
Ga0210289_14735161	3300030543	Soil	RLKSPISAVITDLVREEQFVYDLCLLGAVTVEITQILTRAGI
Ga0247656_10783961	3300030547	Soil	FFSNTHNFYSSTIIVAVATGVVREEQLLHDMSLLGAMTVEITQILTRASMKYI
Ga0247654_10139481	3300030552	Soil	KEAIIVAVTEGLVREEQLLHDMCLLGAMTVEITQILTRAR
Ga0247654_11906501	3300030552	Soil	VAVIEGLVREEQLLHDMCLLGAMTMEITQILTRAGNFFLPEYI
Ga0247640_11429991	3300030554	Soil	VIEGLVREEQLLHDMCLLGAMTVEITQIVTRASMKYI
Ga0247640_11934801	3300030554	Soil	SAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGTTWT
Ga0247618_10318441	3300030555	Soil	KKATIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARLLT
Ga0247628_11608261	3300030569	Soil	EGLVREEQLLHDMCLLGAMTVEITQILTRASMKYI
Ga0210258_109790061	3300030572	Soil	TVTTDLVREEQFVHDLCLLGAVTVEITQILTRAGK
Ga0247644_10734241	3300030576	Soil	VIVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGNVY
Ga0247633_101817741	3300030579	Soil	AVIEGLVREEQLLHDMCLLGAMTVEITQILTRASMKYI
Ga0247639_10039171	3300030585	Soil	IVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAS
Ga0210280_11461201	3300030594	Soil	VAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGYI
Ga0247630_11750111	3300030599	Soil	KKYNNIVAVIEGLVREEQLLHDMCLLGAMTVEITQILTRAGTTWT
Ga0247659_11742622	3300030600	Soil	PIIIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGILT
Ga0247650_10433181	3300030601	Soil	ISAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGVIPRT
Ga0247615_103506201	3300030607	Soil	VAVIEGLVREEQLLHDMCLLGAMTMEITQILTRAG
Ga0247651_102437451	3300030608	Soil	YALLFAIISAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGTTWT
Ga0247651_102660391	3300030608	Soil	LHTKDFESTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARNI
Ga0247613_100298492	3300030610	Soil	VAVIEGLVREEQLLHDMCLLGAMTMEITQILTRAGK
Ga0247655_100359731	3300030621	Soil	EAIIVAVTEGLVREEQLLHDMCLLGAMTVEITQILTRAR
Ga0247655_100400021	3300030621	Soil	VTEGLVREEQLLHDMCLLGAMTMEITQILTRAGYLT
Ga0247629_100203191	3300030628	Soil	KNAIIVAATEGLVREEQLLHDMCLLGAVTVEITQILTRAGKL
Ga0247629_100524062	3300030628	Soil	VAVIEGLVREEQLLHDMCLLGAMTMEKTQISRRAGYLT
Ga0247629_100823291	3300030628	Soil	HTLFITVAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGYLT
Ga0247629_101274721	3300030628	Soil	HTLFITVAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGIF
Ga0247629_101700651	3300030628	Soil	VAATEGLVREEQLLHDMCLLGAVTVEITQILTRAG
Ga0247623_101633591	3300030633	Soil	APIIIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGILT
Ga0247636_103689331	3300030634	Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARNI
Ga0247627_100065061	3300030635	Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRASLPRRKYI
Ga0247627_103461211	3300030635	Soil	IIIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGILT
Ga0265462_106475362	3300030738	Soil	AVIEGLVREEQLLHDMCLLGAMTMEITQILTRAGNIRT
Ga0265460_107080021	3300030740	Soil	LIISAATTDLVREEQFVYDLCLLGAVTVEITQILTRAGLPTGHKYI
Ga0075402_101745642	3300030777	Soil	VAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAG
Ga0075402_101774973	3300030777	Soil	IYIIIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT
Ga0075378_100260001	3300030779	Soil	VTTDLVREEQFVYDMCLLGAVTVEITQILTRAGILWT
Ga0075384_100649381	3300030841	Soil	FLIILAVTTDLVREEQFVYDLCLLGAVTVEITQILTRAGIIIGHKYI
Ga0075377_101105641	3300030844	Soil	KKNNKSCLSTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARTL
Ga0075403_101035941	3300030846	Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARTL
Ga0075387_100644741	3300030850	Soil	LAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGILWT
Ga0075380_100213611	3300030851	Soil	TDLVREEQFVYDLCLLGAVTVEITQILTRAGIKKFRT
Ga0075380_113895022	3300030851	Soil	GLVREEQLVHDMCILGAMTVEITQTLSRVGLFLRKYI
Ga0075372_100752223	3300030853	Soil	LIDKFLKKKKSVSTAITDLVREEQFVYDLCLLGAVTVEITQ
Ga0075372_101242161	3300030853	Soil	TVTTDLVREEQFVHDLCLLGAVTVEITQILTRAGI
Ga0075372_110826772	3300030853	Soil	NNMSIILTVTTGLVREEQLVHDMCILGAMTVEITQTLSRVGLFLRKYI
Ga0265733_1024411	3300030887	Soil	FIKKYFTIISTATTDLVREEQFVYDMCLLGAVTVEITQILTRAGK
Ga0102762_16910421	3300030920	Soil	TDLVREEQFVHDMCLLGAVTVEITQILTRAGIIWT
Ga0138300_12503001	3300030922	Soil	VAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGY
Ga0138300_13137621	3300030922	Soil	VAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAS
Ga0075391_100271191	3300030934	Soil	KNAIIVAATEGLVREEQLLHDMCLLGAVTVEITQILKRAGINF
Ga0138303_10406431	3300030939	Soil	LTVTTDLVREEQFVHDLCLLGAVTVEITQILTRAGI
Ga0138303_10439611	3300030939	Soil	SAVITDLVREEQFVYDLCLLGAVTVEITQILTRTGIKNILT
Ga0138303_10783321	3300030939	Soil	AVTTDLVREEQFVYDLCLLGAVTVEITQILTRAGIIIGHKYI
Ga0138303_15048992	3300030939	Soil	TGLVREEQLVHDMCILGAMTVEITQTLSRVGLFLRKYI
Ga0075383_100407391	3300030966	Soil	IIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT
Ga0075375_100956301	3300030971	Soil	IIVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYNLT
Ga0308183_10436371	3300030988	Soil	TEGLVREEQLLHDMCLLGAVTVEITQILTRARLLT
Ga0074035_109797551	3300031000	Soil	AVIEGLVREEQPLHDLCLLGAMTMEITQILTRAGNIRT
Ga0138298_10831251	3300031015	Soil	HQYIFLIILAVTTDLVREEQFVNDLCLLGAVTVEITQILTRAGVIIGHKYI
Ga0265732_1054421	3300031016	Soil	TDLVREEQFVYDLCLLGAVTVEITQILTRAGIIIGHKYI
Ga0102765_100858052	3300031021	Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAS
Ga0170834_1109236142	3300031057	Forest Soil	MSIILTVTTGLVREEQLVHDMCILGAMTVEITQTLSRVGLFLRKYI
Ga0102767_100631151	3300031064	Soil	IVAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGYMT
Ga0102767_100841461	3300031064	Soil	IILAVTTGLVREEQLVHDMCILGAVTVEITQILTRAGIYWT
Ga0102748_100178271	3300031089	Soil	KKKFAIFVAAIEGLVREEQLLHDMCLLGAVTVEITQILTRAGI
Ga0308180_10072931	3300031100	Soil	QLLKNAIIVAATEGLVREEQLLHDMCLLGAVTVEITQILTRAGKL
Ga0170820_118989281	3300031446	Forest Soil	LAVTTDLVREEQFVYDLCLLGAVTVEITQILTRAGIIIGHKYI
Ga0308150_10353811	3300031505	Soil	IIVAVTEGLVREEQLLHDMWLLGAMKMEITQILTRAGILT
Ga0308006_100110072	3300031683	Marine	VAVTEGLVREEQLLHDMWLLGAMTVEITQILTRAGLHKTI
Ga0316034_1062421	3300031791	Soil	YLKNAIIVAATEGLVREEQLLHDMCLLGAVTVEITQILTRARTL
Ga0316037_1183621	3300031808	Soil	AITDLVREEQFVYDLCLLGAVTMEITQILTRTGIFLWT
Ga0315742_120340451	3300032756	Forest Soil	KKTIISAVTTDLVREEQFVYDMCLLGAVTVEITQILTRAGI
Ga0314780_003101_1491_1625	3300034659	Soil	MSKQIFTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRAS
Ga0314780_199312_2_112	3300034659	Soil	VTEGLVREEQLLHDLCLLGAMTMEITQILTRAGKSL
Ga0314781_081536_503_625	3300034660	Soil	TIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARII
Ga0314781_153489_3_119	3300034660	Soil	VAVTEGLVREEQLLHDLCLLGAMTMEITQILTRAGKSL
Ga0314783_023221_3_131	3300034662	Soil	LSTIIVAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARTI
Ga0314784_026212_2_115	3300034663	Soil	VAVTEGLVREEQLLHDMCLLGAVTVEITQILTRARTI
Ga0314786_023826_2_121	3300034664	Soil	VAVTEGLVREEQLLHDMCLLGAMTMEITQILTRAGSFLT
Ga0314787_014750_3_119	3300034665	Soil	EGLVREEQLLHDMCLLGAVTVEITQILTRASLPRRKYI
Ga0314801_040619_3_116	3300034676	Soil	VTEGLVREEQLLHDMCLLGAMTMEITQILTRAGSFLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences