Sample 3300003650

3300003650: Subglacial freshwater microbial communities from Lake Whillans, Antarctica - 3.0 micron filter

Overview

Basic Information
IMG/M Taxon OID	3300003650 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0112339 \| Gp0107770 \| Ga0062111
Sample Name	Subglacial freshwater microbial communities from Lake Whillans, Antarctica - 3.0 micron filter
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	19186035
Sequencing Scaffolds	55
Novel Protein Genes	74
Associated Families	66

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria	7
Not Available	16
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1
All Organisms → Viruses → Predicted Viral	6
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Subglacial Freshwater Microbial Communities From Lake Whillans, Antarctica
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Subglacial Freshwater → Subglacial Freshwater Microbial Communities From Lake Whillans, Antarctica

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → subglacial lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	West Antarctica
Coordinates	Lat. (^o)	-84.24	Long. (^o)	-153.694	Alt. (m)	N/A	Depth (m)	800
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000376	Metagenome / Metatranscriptome	1216	Y
F000450	Metagenome / Metatranscriptome	1126	Y
F000473	Metagenome / Metatranscriptome	1097	Y
F000671	Metagenome / Metatranscriptome	945	Y
F000808	Metagenome / Metatranscriptome	882	Y
F000852	Metagenome / Metatranscriptome	860	Y
F001043	Metagenome / Metatranscriptome	794	Y
F001106	Metagenome / Metatranscriptome	776	Y
F002489	Metagenome / Metatranscriptome	554	Y
F002501	Metagenome / Metatranscriptome	553	Y
F003408	Metagenome / Metatranscriptome	488	Y
F003411	Metagenome / Metatranscriptome	488	Y
F004727	Metagenome / Metatranscriptome	426	Y
F005167	Metagenome / Metatranscriptome	410	Y
F006657	Metagenome / Metatranscriptome	367	Y
F006841	Metagenome / Metatranscriptome	363	Y
F007263	Metagenome / Metatranscriptome	354	Y
F007364	Metagenome / Metatranscriptome	352	Y
F007688	Metagenome / Metatranscriptome	346	Y
F008023	Metagenome / Metatranscriptome	340	Y
F008357	Metagenome / Metatranscriptome	334	Y
F008806	Metagenome	327	Y
F009327	Metagenome / Metatranscriptome	319	Y
F009741	Metagenome / Metatranscriptome	313	Y
F010028	Metagenome / Metatranscriptome	309	Y
F010448	Metagenome / Metatranscriptome	303	Y
F011394	Metagenome / Metatranscriptome	291	Y
F012098	Metagenome / Metatranscriptome	283	Y
F012451	Metagenome / Metatranscriptome	280	Y
F013762	Metagenome / Metatranscriptome	268	Y
F013888	Metagenome / Metatranscriptome	267	Y
F014140	Metagenome / Metatranscriptome	265	Y
F014968	Metagenome	258	Y
F015975	Metagenome / Metatranscriptome	250	Y
F016389	Metagenome / Metatranscriptome	247	Y
F017301	Metagenome / Metatranscriptome	241	Y
F018925	Metagenome / Metatranscriptome	232	Y
F019092	Metagenome / Metatranscriptome	231	Y
F021110	Metagenome / Metatranscriptome	220	Y
F023844	Metagenome / Metatranscriptome	208	Y
F027826	Metagenome / Metatranscriptome	193	Y
F034570	Metagenome / Metatranscriptome	174	Y
F034573	Metagenome	174	Y
F035737	Metagenome / Metatranscriptome	171	Y
F037095	Metagenome / Metatranscriptome	168	Y
F038675	Metagenome / Metatranscriptome	165	Y
F039114	Metagenome / Metatranscriptome	164	Y
F043392	Metagenome / Metatranscriptome	156	N
F045058	Metagenome / Metatranscriptome	153	Y
F045805	Metagenome / Metatranscriptome	152	Y
F048802	Metagenome / Metatranscriptome	147	Y
F049622	Metagenome	146	Y
F056611	Metagenome / Metatranscriptome	137	Y
F059715	Metagenome / Metatranscriptome	133	Y
F066733	Metagenome / Metatranscriptome	126	N
F072349	Metagenome / Metatranscriptome	121	Y
F072857	Metagenome	121	N
F076008	Metagenome	118	Y
F076222	Metagenome	118	Y
F085262	Metagenome / Metatranscriptome	111	Y
F093845	Metagenome / Metatranscriptome	106	Y
F097356	Metagenome / Metatranscriptome	104	N
F099158	Metagenome	103	Y
F101030	Metagenome / Metatranscriptome	102	N
F103135	Metagenome	101	Y
F103268	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
SLW30_100001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28949	Open in IMG/M
SLW30_100010	All Organisms → cellular organisms → Bacteria → Proteobacteria	15995	Open in IMG/M
SLW30_100012	All Organisms → cellular organisms → Bacteria	14846	Open in IMG/M
SLW30_100041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7912	Open in IMG/M
SLW30_100070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7009	Open in IMG/M
SLW30_100092	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12633	Open in IMG/M
SLW30_100103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11844	Open in IMG/M
SLW30_100117	Not Available	6748	Open in IMG/M
SLW30_100122	All Organisms → cellular organisms → Bacteria	4475	Open in IMG/M
SLW30_100146	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4278	Open in IMG/M
SLW30_100205	All Organisms → cellular organisms → Bacteria	3871	Open in IMG/M
SLW30_100212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	4712	Open in IMG/M
SLW30_100267	Not Available	3490	Open in IMG/M
SLW30_100289	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3396	Open in IMG/M
SLW30_100399	Not Available	3027	Open in IMG/M
SLW30_100407	All Organisms → Viruses → Predicted Viral	2986	Open in IMG/M
SLW30_100474	All Organisms → Viruses → Predicted Viral	2823	Open in IMG/M
SLW30_100485	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
SLW30_100568	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
SLW30_100610	All Organisms → cellular organisms → Bacteria	4073	Open in IMG/M
SLW30_100638	Not Available	2586	Open in IMG/M
SLW30_100648	All Organisms → Viruses → Predicted Viral	4206	Open in IMG/M
SLW30_100649	All Organisms → Viruses → Predicted Viral	3361	Open in IMG/M
SLW30_100767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6292	Open in IMG/M
SLW30_100814	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2355	Open in IMG/M
SLW30_100922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3278	Open in IMG/M
SLW30_100981	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2212	Open in IMG/M
SLW30_101006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3156	Open in IMG/M
SLW30_101500	Not Available	1892	Open in IMG/M
SLW30_101626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3456	Open in IMG/M
SLW30_101953	All Organisms → Viruses → Predicted Viral	1712	Open in IMG/M
SLW30_101970	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
SLW30_102404	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
SLW30_102471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1562	Open in IMG/M
SLW30_102731	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1496	Open in IMG/M
SLW30_103170	Not Available	1407	Open in IMG/M
SLW30_103288	Not Available	1907	Open in IMG/M
SLW30_103494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1349	Open in IMG/M
SLW30_103733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1909	Open in IMG/M
SLW30_103782	Not Available	1297	Open in IMG/M
SLW30_103833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1289	Open in IMG/M
SLW30_104763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1167	Open in IMG/M
SLW30_104939	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2666	Open in IMG/M
SLW30_106225	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1019	Open in IMG/M
SLW30_106332	Not Available	1010	Open in IMG/M
SLW30_106989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	958	Open in IMG/M
SLW30_108288	Not Available	872	Open in IMG/M
SLW30_108565	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	856	Open in IMG/M
SLW30_109484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
SLW30_111351	Not Available	719	Open in IMG/M
SLW30_111543	Not Available	712	Open in IMG/M
SLW30_113272	Not Available	647	Open in IMG/M
SLW30_114351	Not Available	613	Open in IMG/M
SLW30_114552	Not Available	606	Open in IMG/M
SLW30_115492	Not Available	560	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
SLW30_100001	SLW30_10000124	F027826	MAKPWQSRQEMLVDLALESAISDPETIRQIRPVTPIQMSPERYGYSKRESGIMDVLSLQRNAPSNRSWVSGAPVMFRNGFIDDSFEGSSRYSMQSLWS*
SLW30_100001	SLW30_10000132	F103135	MASDDYRLLVCKTHGTMWKLRPYDGPGEYDMELREICNRHNAQVPNPEACKASIFRTDAETAKKLDMETILTNKLKDHDVYIKDYRDELKVDALKCYSRHNRPKHGCIDWRIDAKIIGRKTGVPKDKLQYLCYYCPAAEYYTHRERIELGLYD*
SLW30_100010	SLW30_1000107	F097356	MSIRKKDRSFENMLRDIHIEEVPVEYIDWIKVYLDDGTEIVFKSADLEGIKTSKDVLAIKQLEEYLDRIIDFEVMMNSELIKSRVTRFVGALLATHFNQED*
SLW30_100012	SLW30_10001216	F012098	MPKVHSIGPAHFVQITNFPFKWGKKIIVRGWTQEIEPPFRTSDPLIVRLPYYKALVFGRWTGTKTEEEALNGALQRRDLTYEDFTEEAGWTPAPDSDRKESLEDIDARFSNVDGTVTVHNWQTHYKLATSIE*
SLW30_100012	SLW30_1000128	F008023	VPTKPTSPLDATGRAAEAATRKNADELRKRKDELSTATQLEEESLSRDVFDPKKPDAPLVLDEIEDVGVVTANNTVIIRTITDIDDMTYGVGNDYTFKAGVKYRVPVALAAHLEQLGYIWRPN*
SLW30_100041	SLW30_1000413	F018925	MSINTANVYTSLSANTVYTDKLQITTGANAVTYQSYAEALGTGNATGNIFSAPINIPANTVFEAYSGAGNKVTIVGGPFTALELGTASSALYGVIGYGS*
SLW30_100070	SLW30_10007010	F008806	MSFLLDEDEALRNLLKDMVVTDQKSVTEEGPTRTVGVWFGQPDQEIRNQSYPFITIDMIDIAEDFTRAMRGKVKPAYLTNPSTIGEDTEFDGDLHGWDIDYPIPVNIDYQITTYSRQPRHDRQILATLLHTKLPFRFATLETGPNTVYGTSRRLDVLDVAKRDITEQGKRLFVNAITVRISSEIVSTTFNKLYKAQEINVTGTSGTVTNGKGQFTAIQSYTTSAP*
SLW30_100070	SLW30_1000702	F009327	MRGTKVQGRFKIDFETKSMDEGMVDELRDPVGNEVDWWLWDNAALQADYETWVDPIYDVSNQTDGQGRRWNEPFKFPVMLAQHQRGSNTLNERGFYTVDTLRIVAAVADVNRLLPNIIAAPTLHIKDRIVFQGAVFVPTLVNPRGLYSTRYSVVTITCNQVNSEELVNDPQFQSYAN*
SLW30_100092	SLW30_10009211	F009741	LTQRVEGSYDKMKPWRAPLQPDLVAKRYSYHGPWASNMERLTQQALMVMNIPGKDIQEMVRVPLPQIQLFPDRYGYGPRVQPGIADIVTIDRKYSEPRVSWYSGGPGGYTASSRNDLGSN
SLW30_100092	SLW30_10009214	F005167	MAVNSSRSMNTSLNEGATDGKYRKVRPDTEVIPGSGNEETINNRQSLHPFYNYGFVTSEYPNKVNPGK*
SLW30_100092	SLW30_10009219	F019092	MTIPILGQKKQNNEEMFRLLYCLVCGTLEELPPYDGPLEQDVLLTIACETHVFPSGEPHKGKLFVIPIRAWAHTDSRKEMIRQIRGGGSKGIAEIDDKFYESRSNFMEDAMTCYGQHNKPKDGCVDWHIKQKMLVPNTAKERKEEGMERYADSPGPKTYLCDFCPVAIGVATRKQKLMGMK*
SLW30_100103	SLW30_10010320	F035737	MSRGFNVIDTDWAHDLEKGVEDYTDMLFEAVYEGSEDVIPETLSGELFCGCSACFWREALFYIAPRLLEGYEEGKIELED*
SLW30_100103	SLW30_1001036	F010448	MKKGDISNVSSPQVICITDVVIGLREEEVKKFLSKKIERKIGDIDKLAANKLWLISNNYGISLELAGFENQGWTEVLLDMAFEKLERRIVNPFNYWQLYESPQDLVETLPYRANLKGVIDIAGRVAMYGSAGIEINNL*
SLW30_100117	SLW30_1001173	F002501	MYCVKCNGRVFVDRVFSQKLHMELFCIMCGFRVMINKETSKFGKWLDQKEIANQKNYGIFS*
SLW30_100122	SLW30_1001223	F037095	VAKDINKDGKVTMIEEVVSALGTYARAFLAAAIALYMTGNTDVKSLLMAGVASVAPVILKGLSPTNKEFGFKSKK*
SLW30_100122	SLW30_1001224	F008357	MAGKKNFEVDQNTTFTFIVEYKDNNGLAIDLSGASAKLQVRDTAGGSKVAYTLTSDGGGIVIDDVLGKLTCKATPTHTNKLFFPKSSYDLMLTDSNLNKTKLLEGFITLSRSVTI*
SLW30_100146	SLW30_1001466	F076008	MMSYFWQKTKGLKADIERHRAKEQELLTKIDELEKPEHQGDPMSIAAIRTYRRFLYMLQQSKADVVSKLGK*
SLW30_100205	SLW30_1002053	F000376	MSEYQEKAKQCKCCSKHVPLPTVLREYAGQIVCPTTYTNIIEYKRIWDSYGHRPMGGIRKHFSEYVQQIVEASIL*
SLW30_100212	SLW30_1002125	F017301	MNDKLKAALASYGRSVLGAGLALYMSGVTDPKTLAYSLVAALAPVAIRAINPNDKAFGRLPDLAEVAAALKSVRIKKAPAKKKK*
SLW30_100267	SLW30_1002672	F103268	MTDYSIDAMYEIRRHLWAELLSSALLDADSYYADNLGEAIIPIIPIQQQPELNQFLSGKTHIVYDKIGMSYQDNWMICQERILFTIYSVDVAEINSIRNLMIDVFRRMDDSARDLNVSKTTPKIKFFNTSVIEVSPTSPSEELQGFMSADVILETQYARTVGQNGRFD*
SLW30_100267	SLW30_1002674	F006841	LATTVYDVEEIELQNGVVVKLKPLTIKELRKFMVVVQKTVKAKNEDETLSILVDACAVALEKQLPELVKDRDAFEDVLDVPTINRILDVCGGIKMDDANLLAAAVLDGQN*
SLW30_100267	SLW30_1002675	F003408	MPELVQTFKAIQKSESEKRIFLASLQGVEMNSDEQENKGPTFEDVQRRALGINTSGDDVVSLQGGLAAQAGFGIGAGLGYSKE*
SLW30_100289	SLW30_10028910	F007263	MLAQQIDSNEFYEIMDEQFYCCSQSQFIYYCKLHGEQMGCQFCEFNPYEKCECE*
SLW30_100289	SLW30_10028911	F093845	MIPVTLTTTSGTNKSMSFPDRKSVENFIENMANKLTIGTVVNIDAPLIGIHSGWIQGRAPAIPF*
SLW30_100399	SLW30_1003996	F034573	MYRIQRKPEITKEEKVAVKIGNLLTDFTLDLEKVGYYVARATPYLIYRRSLEVLESAQFQQDTVEQNRLGYNHDRLF*
SLW30_100407	SLW30_1004075	F000852	MTTKREYLKEQNIHVGVRGAFSGAAKVVLREAAAKGLTFTAEAKKAKKYN*
SLW30_100474	SLW30_1004743	F012451	MVRDITDLDANDLPDSLIKLYLRDGYYRVLDLEKRWPFLEKTFTFATVSGTRAYTVSAFTADPMDQIMSIMDNVGVGNNLEMVAYNELEQAYAGGSDTARPPEFYALWEGKIHLFPKPNDIRTLTVRGYREPIDWVTTGAAVDASANLHIALAYYACSRIYQRLEDTEMANEYKRSFDEAVTLAVKNIQIPTSHASLVLSGRSLGRTNDRWLKALGRNGTIQT*
SLW30_100485	SLW30_1004852	F038675	MKLYQSKDWLYRRYVVQKKTVTEIGKECEVSAMTIQRYLDKMGLIKKR*
SLW30_100485	SLW30_1004855	F013888	VIVGVLPASGKASRIGGIPKFCLPISDERSLIQWHVEQMLAVCDEVRISTRQEWVPLVQNMDMNVKIIVKGPSTMSDAIKFMIGDYDDTVLIGMPDIYILNSSANIYKEMFKENADLVLGAWECTDDLRGLVGQIEILDNRVVSSKDKDKDCDYRYMWGTMLFRKNMIRYINPILDHPGKQIQEWIDMGLSIRAVHQGGKYMDIGTLRGLKQLYKEME*
SLW30_100568	SLW30_1005684	F000671	MEKILCYSCNKSKNKLETKKSSLLNINLFICETCSTAKLEPRWVVILAGRTNGSDYVKEVILKKRYLGADITASELLV*
SLW30_100568	SLW30_1005686	F000473	METIKMTNSDHFKYGVNEWTGEPNKPVFYSNEMSKRVRDIKRPVHNLQMDIVQYPEFLAIRLYEDNFIQFDGIKKEMVIDYVSKVKRLIESYGVRCEMEGRPSERILRSN*
SLW30_100610	SLW30_1006104	F000376	MSTYQEKAKECKCCGRHIPLPTVLKEYNGIVVCPTTFSNIAEYKRLWVSFGSRPAGNIRKHFSDYVQQIVEKSTGEQNE*
SLW30_100638	SLW30_1006386	F000852	MQTKREYLKTQGIHVGVRGAYSGAARVVLREAAAKGLVFEAVKPVKKVK*
SLW30_100648	SLW30_1006484	F014968	MIITLSKEEVRACADIALNRWMMKWGSVDRPNYAGDNKSKLEPEISANVRTIVAEYAVAKAYKQPLTFPFYPNEEHGFRKNFADVGGNIEVKSVRTWDEIPVFPKDIREGFILVGVRVLDRDYYSEVEIYGWLKMEDVKRKEWFYAKEGSWRIPLDQFNTSIPEVVRV*
SLW30_100649	SLW30_1006495	F000852	MTTKREYLKEQNIHVGVRGAFSGAAKVVLREAEAKGLTFKAEAKKAKKYN*
SLW30_100767	SLW30_10076717	F021110	VLTDKDKNLTRAIAFPTMYKMALAKMRESMKCRVVLSTLDDGTLMIKEIK*
SLW30_100767	SLW30_1007676	F006657	MKLADLVKTKAGRVLGIDASTNSVAFCLMENDKPLKWGKIELTGMDIFDKIYDAKKKVHVMLGELKADYIVVEGAVLVNRSKGVNGAAHKLAGLH*
SLW30_100814	SLW30_1008144	F007263	MLKNQIDSNEFYDIIDEQMFCCSESQFVYYCKAHTELMGCQFCEFNPYEKCECE*
SLW30_100922	SLW30_1009225	F007688	MTANYKLDAMIEIRKFLWDELVSNNIFDPADYTIDTFGSTNPILPVQQQAIMNQTLNGKKHIVYDKIGMSYEDNWMVCNDQILFTIYS
SLW30_100981	SLW30_1009811	F006657	MKLADLVKTKANRVLGIDASTNSIAFCLMENDKPLKWGKINLAGMDIFDKIYDAKVKTNAMLEELRSDYIVVEGAVLVRSPDAVIKLS
SLW30_101006	SLW30_1010065	F099158	MILEDLEYIFAPQIAEGTNKLYFMLKDGNATHIERHAVDDLASLLPMLDSFNYAGTESRIPSFIK*
SLW30_101190	SLW30_1011903	F049622	MKKASDIFNRIIALFLSSALAIITGATIIGGIPIWKSAALAGFAAVAKVVESLAKSSVDGSLTKAEIDAAFGGKSGRK*
SLW30_101500	SLW30_1015003	F000808	MSEYTYSLTTSYDGELVHTLRVTDLLVAVDAWYKCVDFSTAKEYATYNLSDPTGKMYSKTFYRNGKVEIK*
SLW30_101626	SLW30_1016262	F011394	MIIINDNKGHFKYGINQQTGEPNKPTFYTKEMSLKIRGIRKPAYDLKMDIVKYPDFLAIRLYEDNFKQYDGSMKLKVIDYIEMVKKILETYGVRVELEGKPGGANK*
SLW30_101626	SLW30_1016263	F072349	MTEEKVLCAICNKSKNKLSVKKSLLMPINVLVCETCLVNKLEPRWLVIISGRQYGAEYVKDYIAKKKYVGVDITASELLI*
SLW30_101953	SLW30_1019531	F010028	GHGELAMVIGFAHGGKTLLLMHMLEQNRDKHIALFIPDEPRQLVLTKLTCMHHNIDARELEARIARDDKKAMDLLRSTAEESFPNLAVFDQPLNSADMERGYGEVSEVWGRAPELVVVDFLDLVDAGETVPDKANFLKGFGRRHDVPLMVLHQTSRTAGADGRKLTMSSGAYGGEQQATMVIGVRRRKYEIAAEIHELVEKLDRSHSERATERLELLRYEQKIHEHTLTINLLKNKRPAGQLVDDIDFELDMRTGKLTDLHGELPRTYRQESMNWQDVEDF*
SLW30_101970	SLW30_1019702	F023844	MTKLKAQEPAKGVLKVNSWGSSVMYKVVCQCGGDECTHTIDIEADDAVTVSIYTLTSTNFWTMKRWTHIWQLLTKGYTKFETSIIMDKQVALNYASVLQSAVKDVEEFRRQYNEKHAAAKLHD*
SLW30_102404	SLW30_1024044	F016389	MKVIRKFAVQGHAVPSSSHSPRGPFPPEVLAQPQREHGDQHSDSLHVALDDVRFFRCRACEEVLTMAETTNHDCERN*
SLW30_102471	SLW30_1024711	F043392	MEIVSKDYHHNGSGAPFVVAIVDDPADGDTKLVIMFDEPDCTAVFSLDLLIEEEDISARGNGYDGSRYEKLRDDLWDGFSS*
SLW30_102731	SLW30_1027313	F000450	MGDRANFAFVQENGHSIVLYGHWAGDRMLGRLADAVIKAQPRWSDESYATRIAISALVAEQWAEETGWGLQVNSISDNEHRIAVVDFNQRTFSLHEQDEFSNTDNKIRGMKNEAIFTMDLSHFCEKYALEEILV*
SLW30_103170	SLW30_1031701	F004727	MRVKIEYHDTESLTVEEILKLATANYGKAARIEITPESGLAYDHIYFGLQQLITHEQLSLIYDTNSYQQDIKQLRSDVLYKITEILDQVIIDNEARVG*
SLW30_103288	SLW30_1032883	F000808	MDYNYSLTTAYDGEPVHHVVRNNDMLDIVRAWDKCVDYGFAKEYATYNLSDPNGKMYTKTFYRNGKVEIR*
SLW30_103494	SLW30_1034943	F014140	MNTYIVKLNVSLEVNAFNEDDAKEYVSDIFSVDDEIKAVNIVKIQQK*
SLW30_103494	SLW30_1034946	F056611	VNKDHFKYGVNEWTGEPNKPVFYSNEMAKKVREIKKPVHNLKMDIVQYPEFLAI
SLW30_103733	SLW30_1037331	F034570	VTHKRIKRFQINVEFYDNAQLISLRPQYENLLTHNMRSMGYVRVLDIDPAFTVEFTGETWKFLMTLH
SLW30_103782	SLW30_1037823	F007364	MRQRENNMGYSTFTEDQITEFIEMAQEMGIGPSMRALGYPKSYHTARKWHEQRHVAMPTSNTLAQMSKQLDIFYGDKEKVLAAQAVIDRTVEALYQDDLTSDDINKLSNALHKAIQTINLIEGKSTNINENRSKDGSDLAIMDILNEAKMRSSSIKDSLRVIQN*
SLW30_103833	SLW30_1038332	F001106	MYLEEGDLTMSFDTLKVAELKTIATDFAVDTEGLKNKKDIIAAMAEEGVTYSVYSKTIADMKDVDEDEKLEIIPRFNPKDLGENAMLVRMTRDNMRYDVKGHTFTKSHPFVGMSEEEAQSIFDTEEGFRLATPKEVQDFYH*
SLW30_104535	SLW30_1045351	F002489	PMVTYIMLHRIYDLLTLIANKLVGSDDVSKMVEYHEQGFLLGPNPSYTPNEDTIVSHETISAEIKDLLT*
SLW30_104763	SLW30_1047631	F045805	MICDSDGKIGYDDKRNKIWVCPKFEHRGHRLYTDRCDKCNSRALKAIVEVNSVYSIGVPNPKRVIYAEGEIIWKAGKYKPSLVYGYSPIFSIWSKAMSLSHMDEYVRKYFDKMRPPRGLLLIASRNYETFRKAWDALEQKAIEDPYMIHPMMIESEKGMKNMAQWMDFTGSLQELQFVEVRKELRQIIGAIYGVLPLYYGEMVGGWSQEGLQVTITNRAVKWGQDIMYKAFFRRIGDALGIDDWDLKLKGGEENDKLRELQQEGVEIQNMALLQQMGFDISMSHTGEFKISKNPTPISPEDMKMGRGRGTAAPKENRQNFSGEPLQASPSDIGGIAQGHPASGSGTSMSKKNYMDGVTPSNFDVIKQTFQTSVDFGWKKTKTIDELRKY
SLW30_104939	SLW30_1049396	F085262	MNRSLEAVLSDWYPEGDFTEEELWDAIAESEGVDLNEIMDGNLEDYL*
SLW30_106225	SLW30_1062251	F045058	LLTFNIGTGSIEKVSNLRDKHNLTEIYVSEYETTGYTGR*
SLW30_106225	SLW30_1062252	F001043	MSDYKEGFDDGVKFAREEMIDKLREININDIDSWLLDRLADMIEGGKL*
SLW30_106225	SLW30_1062254	F000450	MGDRANFAFVQENGHSIVLYGHWAGDRMLGRLADAVIKARPRWSDESYATRIAISALVAEQWAEETGWGLQVNSISDNEHKIAVVDFNQLTFSLHEQDEFSNTDNKIRGMKNEAIFTMDLAHFCEKYALEEVLVN*
SLW30_106332	SLW30_1063322	F015975	MNTPEITLGCVANLWSRMMVFTDVGDTEPGHKHQFDHLTLLAHGSLKVSIDGVSSVFKAPHMIYIHADKNHELVALEANTVAYCIHAIRKPGTDDILAPDMIPGYTENPMTVPGTFIK*
SLW30_106989	SLW30_1069891	F076222	MLSLSNPRHRKWDAEITHARQQDDWLQFEADIHRSAALRARVARALDRYGLGTSDIAVDEALDYLTHKELGQSARFFNQTGKTQFNQQQLTHAVLSYMSRKEQQRHMTDCALPTDDHDDDTAASFHLPDNTSLTPDEYAARRDALRAIAAMIPEQDAELYRIMLAVRETGSVGERGTLDHLRAYATRQGIAISTVYFRIQKLAETIRQHPWFEEITRPFRPIRSAA*
SLW30_108288	SLW30_1082883	F048802	MRKLRQDRNHVIYLITADTGDTYIGLTVALGQAFLKSVKVRVQKHF
SLW30_108565	SLW30_1085653	F059715	MALDFNFADIIDLLDGEEFEEKPVDLKTFVHDPKYLGLPAL
SLW30_109484	SLW30_1094841	F003411	EAETEMFETLAVDAAKKESLYKNHWAKEYLSAKGSIKEREAWADYKMDASHFEFKVAEAMMKAKREALLSIRASMDAMRTLNANVRAQV*
SLW30_111351	SLW30_1113511	F066733	ATQTITSIDVTPTTITGVYLIADYDEIENSPFGLIQVLVEASAANYEDFVATNMLDTVSAEGVLTPGLWIRGDTGAVVTGSDTASVAMDESGIAFAREYLDNQGYLRGGIMPVCFMDAQQFRELITSTNVTSLATRSAPDIWIKANLEVFMGVQIVVTNAVEHKSQTNSAINAIMCVPKHSYGIAVKRNVTVKMHDVPEDNQVRINTSWRTLSKVIDATSIVRISTTD*
SLW30_111543	SLW30_1115431	F013762	VTGVGTGRRALAAAGYGTDKAIFGYGIAAANVSATNLVSNTGVVSTDTTGVGTARYFIAAAGYDTDKAIFGYGYSTANVSITNLVSNTGIVSANVTGVGTARQGIAAASFGS*
SLW30_113272	SLW30_1132721	F072857	MASNFFEINKCKQLLNIDITDTADDELLITFGEVSNQHLDNLLKQHDERIPLKVPSILADVQMAANYYVCSLFKGKRGDVEVAKYWKEMFTDTVNGIVQDRKVDNLSYTAHRFKGSTNDHTENSIFT*
SLW30_114351	SLW30_1143511	F101030	MTLTQFQEAFAIAKSTKSLTDVDDSNLYGFGLDDFKPVHTTIEAVAKTIRWQALQFDGNWNAELLDEVAKCGRRNFIVLG*
SLW30_114552	SLW30_1145521	F039114	MATKLDVNTGGTKIGAKIWEIHQRNEYTHVDNYKEGMCFGCFGNNVVGALVSDICGDCAGKRGRETILVPIKTVIYGLCHFCGIYKFNMEQVNVRLCFKCHRKVADVMRDFNKKGGMYKVDPFWVNQSRKNGKDWRVIFDGGSKTRL*
SLW30_115492	SLW30_1154922	F007263	MLKNQIDQNEFYQIIDEQFFCCSESQFTYYCKAHTELMGCQFCEFNPYDKCECEE*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003650: Subglacial freshwater microbial communities from Lake Whillans, Antarctica - 3.0 micron filter

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences