Metagenome / Metatranscriptome Family F082887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082887
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	66 residues
Representative Sequence	MEKIKKIAKYTTNILAIISALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKVIKDKEE
Number of Associated Samples	85
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.42 %
% of genes near scaffold ends (potentially truncated)	11.50 %
% of genes from short scaffolds (< 2000 bps)	35.40 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.442 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (27.434 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut (38.053 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.14% β-sheet: 0.00% Coil/Unstructured: 40.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1ez3a_	1ez3	0.85695
a.278.1.1: PSF1 N-terminal domain-like	d2q9qc_	2q9q	0.84766
a.2.14.1: DnaK suppressor protein DksA, alpha-hairpin domain	d1tjla1	1tjl	0.8009
a.2.17.1: VPS23 C-terminal domain	d2f6ma2	2f6m	0.79187
a.47.1.1: STAT	d1uura1	1uur	0.77889

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01510	Amidase_2	29.20
PF13884	Peptidase_S74	4.42
PF10779	XhlA	2.65
PF08291	Peptidase_M15_3	2.65
PF13392	HNH_3	1.77
PF08230	CW_7	1.77
PF03354	TerL_ATPase	1.77
PF01551	Peptidase_M23	1.77
PF13274	DUF4065	1.77
PF02452	PemK_toxin	1.77
PF01381	HTH_3	0.88
PF05895	DUF859	0.88
PF05709	Sipho_tail	0.88
PF17210	SdrD_B	0.88
PF03374	ANT	0.88
PF12784	PDDEXK_2	0.88
PF12844	HTH_19	0.88
PF05857	TraX	0.88
PF12949	HeH	0.88
PF03382	DUF285	0.88
PF03793	PASTA	0.88
PF01844	HNH	0.88
PF09581	Spore_III_AF	0.88
PF13306	LRR_5	0.88
PF00149	Metallophos	0.88
PF01520	Amidase_3	0.88
PF08239	SH3_3	0.88
PF08281	Sigma70_r4_2	0.88
PF13022	HTH_Tnp_1_2	0.88
PF11417	Inhibitor_G39P	0.88
PF03690	UPF0160	0.88
PF06854	Phage_Gp15	0.88
PF14594	Sipho_Gp37	0.88
PF00588	SpoU_methylase	0.88
PF01556	DnaJ_C	0.88
PF12631	MnmE_helical	0.88
PF14903	WG_beta_rep	0.88
PF14279	HNH_5	0.88
PF02195	ParBc	0.88
PF07591	PT-HINT	0.88
PF00436	SSB	0.88
PF01183	Glyco_hydro_25	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.77
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	1.77
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.88
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.88
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.88
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.88
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG4286	Uncharacterized conserved protein, UPF0160 family	Function unknown [S]	0.88
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.60 %
Unclassified	root	N/A	35.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.98 %
Unclassified	root	N/A	35.40 %
Viruses	superkingdom	All Organisms → Viruses	10.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.44 %
Unclassified	root	N/A	35.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.54 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.36 %
Unclassified	root	N/A	35.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	3.54 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.65 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	37.17 %
Unclassified	root	N/A	35.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	3.54 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	23.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	3.54 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	23.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	3.54 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.88 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	7.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	3.54 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	0.88 %
Peptostreptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae	0.88 %
Siphoviridae sp. ctiJI15	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctiJI15	0.88 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	7.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	3.54 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.88 %
Romboutsia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Romboutsia	0.88 %
Siphoviridae sp. ctiJI15	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctiJI15	0.88 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	3.54 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples	3.54 %
Romboutsia timonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Romboutsia → Romboutsia timonensis	0.88 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.88 %
Siphoviridae sp. ctiJI15	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctiJI15	0.88 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.08 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	3.54 %
Clostridium sp. CAG:269	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:269	0.88 %
Clostridium sp. CAG:492	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:492	0.88 %
Clostridium sp. CAG:575	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:575	0.88 %
Clostridium sp. CAG:793	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:793	0.88 %
Romboutsia timonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Romboutsia → Romboutsia timonensis	0.88 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.88 %
Siphoviridae sp. ctiJI15	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctiJI15	0.88 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2077657009\|BRPC3_contig01113	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300000278\|EM209_1000474	All Organisms → cellular organisms → Bacteria	19270	Open in IMG/M
3300000278\|EM209_1008505	Not Available	1370	Open in IMG/M
3300000331\|EM203_1071228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:269	11740	Open in IMG/M
3300003118\|Ga0052233_100375	Not Available	569	Open in IMG/M
3300006217\|Ga0081461_1030709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3989	Open in IMG/M
3300006463\|Ga0100176_1001268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	25611	Open in IMG/M
3300007305\|Ga0104872_102199	All Organisms → Viruses	12685	Open in IMG/M
3300008326\|Ga0115311_110106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2161	Open in IMG/M
3300008496\|Ga0115078_102746	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7670	Open in IMG/M
3300008599\|Ga0111091_116490	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1100	Open in IMG/M
3300008640\|Ga0111422_100020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	210225	Open in IMG/M
3300012007\|Ga0120382_1008288	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300012979\|Ga0123348_10012165	Not Available	5030	Open in IMG/M
3300012983\|Ga0123349_10001737	Not Available	17516	Open in IMG/M
3300012991\|Ga0157148_1019111	Not Available	1066	Open in IMG/M
3300012991\|Ga0157148_1025677	All Organisms → cellular organisms → Bacteria → Terrabacteria group	951	Open in IMG/M
3300012992\|Ga0157150_1074380	Not Available	646	Open in IMG/M
3300013426\|Ga0116649_1001048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	8741	Open in IMG/M
3300013900\|Ga0117820_1000015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	62494	Open in IMG/M
3300014963\|Ga0134523_1009809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7082	Open in IMG/M
3300018427\|Ga0187903_10073755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3316	Open in IMG/M
3300018878\|Ga0187910_10606009	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300021255\|Ga0223825_10845105	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300021387\|Ga0223845_10751125	Not Available	20463	Open in IMG/M
3300021387\|Ga0223845_12693666	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21511	Open in IMG/M
3300021400\|Ga0224422_11120547	Not Available	522	Open in IMG/M
3300021431\|Ga0224423_10257191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1655	Open in IMG/M
3300023504\|Ga0257038_114584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2294	Open in IMG/M
3300024272\|Ga0257077_11816826	Not Available	644	Open in IMG/M
3300024486\|Ga0255059_10020569	All Organisms → Viruses → Predicted Viral	2511	Open in IMG/M
3300026522\|Ga0256406_1118478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Romboutsia → Romboutsia timonensis	710	Open in IMG/M
3300026549\|Ga0256404_1004170	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	27696	Open in IMG/M
3300028480\|Ga0233383_1041031	Not Available	745	Open in IMG/M
3300028481\|Ga0233366_1048581	Not Available	1039	Open in IMG/M
3300028591\|Ga0247611_10036098	Not Available	5074	Open in IMG/M
3300028591\|Ga0247611_10321277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:492	1665	Open in IMG/M
3300028591\|Ga0247611_10588334	Not Available	1188	Open in IMG/M
3300028797\|Ga0265301_10019168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5682	Open in IMG/M
3300028797\|Ga0265301_10048177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3324	Open in IMG/M
3300028797\|Ga0265301_10086818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2393	Open in IMG/M
3300028797\|Ga0265301_10784733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	696	Open in IMG/M
3300028832\|Ga0265298_10001494	Not Available	34742	Open in IMG/M
3300028832\|Ga0265298_10007646	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	13089	Open in IMG/M
3300028832\|Ga0265298_10055766	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	4114	Open in IMG/M
3300028833\|Ga0247610_10001007	Not Available	36267	Open in IMG/M
3300028887\|Ga0265299_10061779	All Organisms → Viruses → Predicted Viral	3106	Open in IMG/M
3300028887\|Ga0265299_10070753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2896	Open in IMG/M
3300028887\|Ga0265299_10580427	Not Available	949	Open in IMG/M
3300028888\|Ga0247609_10007677	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10255	Open in IMG/M
3300028888\|Ga0247609_10230293	All Organisms → Viruses → Predicted Viral	1907	Open in IMG/M
3300028914\|Ga0265300_10241312	Not Available	1234	Open in IMG/M
3300029099\|Ga0169186_107342	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctiJI15	2819	Open in IMG/M
3300029104\|Ga0169203_108326	Not Available	2725	Open in IMG/M
3300029116\|Ga0168822_102487	All Organisms → cellular organisms → Bacteria	10052	Open in IMG/M
3300029118\|Ga0168844_100227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	75987	Open in IMG/M
3300029119\|Ga0168816_100672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36712	Open in IMG/M
3300029122\|Ga0168799_1000142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	99639	Open in IMG/M
3300029124\|Ga0169224_1040681	Not Available	887	Open in IMG/M
3300029136\|Ga0168747_100023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	314007	Open in IMG/M
3300029197\|Ga0167473_100015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	184728	Open in IMG/M
3300029215\|Ga0167476_100521	Not Available	38989	Open in IMG/M
3300029220\|Ga0168707_100602	Not Available	25096	Open in IMG/M
3300029238\|Ga0168766_100154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	111638	Open in IMG/M
3300029245\|Ga0168762_100392	All Organisms → cellular organisms → Bacteria	66329	Open in IMG/M
3300029245\|Ga0168762_106494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5335	Open in IMG/M
3300029245\|Ga0168762_110574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:793	2974	Open in IMG/M
3300029248\|Ga0168696_1004923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5186	Open in IMG/M
3300029256\|Ga0168827_100088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	146140	Open in IMG/M
3300029305\|Ga0307249_10125876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	8683	Open in IMG/M
3300029305\|Ga0307249_12563510	Not Available	712	Open in IMG/M
3300029326\|Ga0243238_103301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	4307	Open in IMG/M
3300029326\|Ga0243238_105076	All Organisms → Viruses → Predicted Viral	2776	Open in IMG/M
3300029415\|Ga0243378_1036244	Not Available	630	Open in IMG/M
3300029444\|Ga0243728_1003452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8869	Open in IMG/M
3300029559\|Ga0244915_103081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8670	Open in IMG/M
3300029565\|Ga0244861_105523	All Organisms → cellular organisms → Bacteria	5054	Open in IMG/M
3300029565\|Ga0244861_108568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3339	Open in IMG/M
3300029579\|Ga0244893_100459	All Organisms → cellular organisms → Bacteria	54772	Open in IMG/M
3300029579\|Ga0244893_107174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	3757	Open in IMG/M
3300029587\|Ga0245119_107038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5469	Open in IMG/M
3300029589\|Ga0245106_137267	Not Available	898	Open in IMG/M
3300029590\|Ga0245099_1001591	Not Available	28373	Open in IMG/M
3300029610\|Ga0245132_155042	Not Available	529	Open in IMG/M
3300029622\|Ga0245124_1034856	Not Available	1073	Open in IMG/M
3300029705\|Ga0224414_12076564	Not Available	581	Open in IMG/M
3300029711\|Ga0245193_115829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1736	Open in IMG/M
3300029718\|Ga0245237_1035187	Not Available	1244	Open in IMG/M
3300029734\|Ga0245168_130774	Not Available	707	Open in IMG/M
3300029745\|Ga0245251_101555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	19113	Open in IMG/M
3300029815\|Ga0244882_1001435	Not Available	27568	Open in IMG/M
3300029815\|Ga0244882_1056330	Not Available	685	Open in IMG/M
3300029820\|Ga0245026_110283	All Organisms → Viruses → Predicted Viral	4261	Open in IMG/M
3300029850\|Ga0245287_100626	Not Available	41373	Open in IMG/M
3300029850\|Ga0245287_125292	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300029852\|Ga0245291_103922	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8035	Open in IMG/M
3300029860\|Ga0245305_1000435	All Organisms → cellular organisms → Bacteria	61657	Open in IMG/M
3300031760\|Ga0326513_10000552	Not Available	31834	Open in IMG/M
3300031760\|Ga0326513_10002439	Not Available	13759	Open in IMG/M
3300031760\|Ga0326513_10010707	Not Available	6532	Open in IMG/M
3300031867\|Ga0326511_10027063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	4738	Open in IMG/M
3300032038\|Ga0326512_10001037	Not Available	22436	Open in IMG/M
3300032038\|Ga0326512_10003202	All Organisms → cellular organisms → Bacteria	12045	Open in IMG/M
3300033463\|Ga0310690_10216447	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2187	Open in IMG/M
3300033463\|Ga0310690_10276933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:575	1910	Open in IMG/M
3300033463\|Ga0310690_11454945	Not Available	745	Open in IMG/M
3300033463\|Ga0310690_11706856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	677	Open in IMG/M
3300033463\|Ga0310690_12229727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	575	Open in IMG/M
7000000191\|C2962992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	704	Open in IMG/M
7000000200\|C3119408	Not Available	708	Open in IMG/M
7000000417\|C2611742	All Organisms → cellular organisms → Bacteria → Terrabacteria group	801	Open in IMG/M
7000000633\|C2455869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2145	Open in IMG/M
7000000659\|C5539278	Not Available	2724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Human	Host-Associated → Human	53.10%
Mammals	Host-Associated → Mammals	46.90%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Human → Digestive System	53.10%
Digestive System	Host-Associated → Mammals → Digestive System	46.02%
Skin	Host-Associated → Mammals → Skin	0.89%

Habitat	Taxonomy	Distribution
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	52.21%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	33.63%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	9.73%
Oral Cavity	Host-Associated → Mammals → Digestive System → Oral Cavity	1.77%
Unclassified	Host-Associated → Human → Digestive System → Unclassified	0.89%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified	0.89%
Unclassified	Host-Associated → Mammals → Skin → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	52.21%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	33.63%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	9.73%
Unclassified	Host-Associated → Mammals → Digestive System → Oral Cavity → Unclassified	1.77%
Unclassified	Host-Associated → Human → Digestive System → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Mammals → Skin → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	27.43%
Human Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal	24.78%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	12.39%
Human	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human	9.73%
Goat Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces	5.31%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	4.42%
Human Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated	2.65%
Human Gut	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Gut	1.77%
Elk Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Elk Feces	1.77%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	1.77%
Pig Oral Cavity	Host-Associated → Mammals → Digestive System → Oral Cavity → Unclassified → Pig Oral Cavity	1.77%
Human Feces	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Feces	0.89%
Human Gut	Host-Associated → Human → Digestive System → Unclassified → Unclassified → Human Gut	0.89%
Baboon Gut	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Baboon Gut	0.89%
Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen	0.89%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	0.89%
Mouse Feces	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified → Mouse Feces	0.89%
Pig Ears Skin	Host-Associated → Mammals → Skin → Unclassified → Unclassified → Pig Ears Skin	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2077657009	Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 6993	Host-Associated	Open in IMG/M
3300000278	Human fecal microbial communities from Cork, Ireland - EM209	Host-Associated	Open in IMG/M
3300000331	Human fecal microbial communities from Cork, Ireland - EM203	Host-Associated	Open in IMG/M
3300003118	Human gut microbiome from lean and obese individuals in Granada, Spain - Obese sample	Host-Associated	Open in IMG/M
3300006217	Combined Assembly of all intestinal viral_metagenomes from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA	Host-Associated	Open in IMG/M
3300006463	Human stool microbial communities from NIH, USA - visit 2 of subject 159207311	Host-Associated	Open in IMG/M
3300007305	Human stool microbial communities from NIH, USA - visit 2, subject 158802708 reassembly	Host-Associated	Open in IMG/M
3300008326	Human stool microbial communities from NIH, USA - visit 1, subject 158458797 reassembly	Host-Associated	Open in IMG/M
3300008496	Human stool microbial communities from NIH, USA - visit 1, subject 160178356 reassembly	Host-Associated	Open in IMG/M
3300008599	Human stool microbial communities from NIH, USA - visit 1, subject 158742018 reassembly	Host-Associated	Open in IMG/M
3300008640	Human stool microbial communities from NIH, USA - visit 2, subject 763901136 reassembly	Host-Associated	Open in IMG/M
3300012007	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1009	Host-Associated	Open in IMG/M
3300012979	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung B1 Day 1 Metagenome	Host-Associated	Open in IMG/M
3300012983	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 Metagenome	Host-Associated	Open in IMG/M
3300012991	Pig viral communities from oral cavity of healthy adult pig - Individual 0	Host-Associated	Open in IMG/M
3300012992	Pig viral communities from ears skin of healthy adult pig - Individual 0	Host-Associated	Open in IMG/M
3300013426	Baboon gut microbial communities from fecal samples in Kenya - M09	Host-Associated	Open in IMG/M
3300013900	Human gut microbial communities from patients with symptomatic atherosclerosis - Chalmers University of Technology - 250	Host-Associated	Open in IMG/M
3300014963	Human fecal microbial communities from elderly subjects during probiotic consumption in Boston, USA - meta_42827d56	Host-Associated	Open in IMG/M
3300018427	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Reed Canary Grass, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300018878	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021431	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300023504	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_16B	Host-Associated	Open in IMG/M
3300024272	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1 Spades (v3)	Host-Associated	Open in IMG/M
3300024486	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026522	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_03	Host-Associated	Open in IMG/M
3300026549	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_01	Host-Associated	Open in IMG/M
3300028480	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung G16	Host-Associated	Open in IMG/M
3300028481	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C4	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028887	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02	Host-Associated	Open in IMG/M
3300028888	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300029099	Human fecal microbial communities from infant at 12 months in Denmark - 128_12M	Host-Associated	Open in IMG/M
3300029104	Human fecal microbial communities from mother in Denmark - 137_M	Host-Associated	Open in IMG/M
3300029116	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021219-39	Host-Associated	Open in IMG/M
3300029118	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021286-32	Host-Associated	Open in IMG/M
3300029119	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021211-26	Host-Associated	Open in IMG/M
3300029122	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019857-129	Host-Associated	Open in IMG/M
3300029124	Human fecal microbial communities from mother in Denmark - 180_M	Host-Associated	Open in IMG/M
3300029136	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI012245-136	Host-Associated	Open in IMG/M
3300029197	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021231-89	Host-Associated	Open in IMG/M
3300029215	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021239-113	Host-Associated	Open in IMG/M
3300029220	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011710-39	Host-Associated	Open in IMG/M
3300029238	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019821-26	Host-Associated	Open in IMG/M
3300029245	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019817-21	Host-Associated	Open in IMG/M
3300029248	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011688-36	Host-Associated	Open in IMG/M
3300029256	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021226-74	Host-Associated	Open in IMG/M
3300029305	Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.	Host-Associated	Open in IMG/M
3300029326	Human fecal microbial communities from healthy subjects in Hangzhou, China - HD-62_Run5	Host-Associated	Open in IMG/M
3300029415	Human fecal microbial communities from liver cirrhosis patients in Hangzhou, China - LD-6_Run5	Host-Associated	Open in IMG/M
3300029444	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 025_10_29_stool_1	Host-Associated	Open in IMG/M
3300029559	Human fecal microbial communities from Shanghai, China - P031V1	Host-Associated	Open in IMG/M
3300029565	Human fecal microbial communities from Shanghai Jiao Tong University, China - SZAXPI022006-90	Host-Associated	Open in IMG/M
3300029579	Human fecal microbial communities from Shanghai, China - P017V1	Host-Associated	Open in IMG/M
3300029587	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35697	Host-Associated	Open in IMG/M
3300029589	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35549	Host-Associated	Open in IMG/M
3300029590	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35392	Host-Associated	Open in IMG/M
3300029610	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35992	Host-Associated	Open in IMG/M
3300029622	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35733	Host-Associated	Open in IMG/M
3300029705	Goat Fecal Pellets diluted in media	Host-Associated	Open in IMG/M
3300029711	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37265R1	Host-Associated	Open in IMG/M
3300029718	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36244	Host-Associated	Open in IMG/M
3300029734	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36981	Host-Associated	Open in IMG/M
3300029745	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37176	Host-Associated	Open in IMG/M
3300029815	Human fecal microbial communities from Shanghai, China - P010V6	Host-Associated	Open in IMG/M
3300029820	Human fecal microbial communities from Shanghai, China - P104V6	Host-Associated	Open in IMG/M
3300029850	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37175	Host-Associated	Open in IMG/M
3300029852	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37208R1	Host-Associated	Open in IMG/M
3300029860	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37337	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M
7000000191	Human stool microbial communities from NIH, USA - visit 2, subject 158337416	Host-Associated	Open in IMG/M
7000000200	Human stool microbial communities from NIH, USA - visit 2, subject 158802708	Host-Associated	Open in IMG/M
7000000417	Human stool microbial communities from NIH, USA - visit 1, subject 158742018	Host-Associated	Open in IMG/M
7000000633	Human stool microbial communities from NIH, USA - visit 2, subject 763577454	Host-Associated	Open in IMG/M
7000000659	Human stool microbial communities from NIH, USA - visit 2, subject 764002286	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BRPC3_00607820	2077657009	Bovine Rumen	MKKVKKIAKYTTNILGMVSMLIVGINAIDGIDIPNAMVLVQIIAVIQGVIGTYLIQGKLWGGK
EM209_10004743	3300000278	Human Fecal	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISNREKK*
EM209_10085052	3300000278	Human Fecal	MEKLKKIAKYTTNILAIISALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK*
EM203_10712282	3300000331	Human Fecal	MEKVKTIAKYLTNILAIVSALVAGINAVDGITIPYAVQIVQVIAVVQGVLGTYLLGQKAISKKEE*
Ga0052233_1003752	3300003118	Human Gut	MEKLKKIAKYTTNILAIISALIAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKVVTNKEDK*
Ga0081461_10307096	3300006217	Mouse Feces	MKKVKKVAKYATNILAIVSALVAGINAVDGITIPYAIQIVKVIAVVNGVIGTFLLGQKAINKEDK*
Ga0100176_100126822	3300006463	Human	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQIIAVVQGVISTYLLGQKAISNREKK*
Ga0104872_1021992	3300007305	Human	MEKLKKIAKYATNILAIISALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK*
Ga0115311_1101062	3300008326	Human	MEKIKKIAKYATNILAIVSALVAGINAVEGITIPYAIQIVQIIAVVQGVIGTYLLGQKAIAEKEEK*
Ga0115078_1027462	3300008496	Human	MERVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKAISNKEE*
Ga0111091_1164902	3300008599	Human	EKIKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAISNKEE*
Ga0111422_100020224	3300008640	Human	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAISNKEE*
Ga0120382_10082882	3300012007	Sheep Rumen	MEIGDDMKEKVKKIAKYTTNILGMISMAIVGINAIEGINIPYALIIVQIIAVIQGVIGAYLIKGKLWGDNK*
Ga0123348_100121656	3300012979	Fecal	MEKVKKIAKYTMNILGIIGALITGINAIDGITIPYAYQIVQIIAVFEGVLGTYLTGNKVYNTIQTK*
Ga0123349_100017379	3300012983	Fecal	MNKEKIKKIAKYTTNILGIISMLIAGINAVDGITIPYAIQIVHVIAVIQGAIGTYLLSGKALESRKEEKENVKD*
Ga0157148_10191112	3300012991	Pig Oral Cavity	MKKIKTIAKYTTNILGIIGAIITGINQVEGISIPYAVQIVGVISVVQGVIGVYLLKTKQQKRRFNYE*
Ga0157148_10256772	3300012991	Pig Oral Cavity	VKKIKKIAKYATNILAIVSALIAGINGVEGITIPYAIQIVQVIAVVQGVIGTYLLGEKAVRTINKGE*
Ga0157150_10743802	3300012992	Pig Ears Skin	MKKIKTIAKYTTNILGIIGAIITGINQVEGISIPYAVQIVGVISVVQGVIGSYLLGNKAVKRRFNYE*
Ga0116649_10010487	3300013426	Baboon Gut	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAIKKEE*
Ga0117820_10000153	3300013900	Human Gut	MEKIKAIAKYAINILAIISALIAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRNKPKV*
Ga0134523_10098096	3300014963	Human Fecal	MEKIKTIAKYAINILAIISALVAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRDKPKV*
Ga0187903_100737553	3300018427	Goat Feces	MEKLKKIAKYTTNILGIIAALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKIVKEEEQ
Ga0187910_106060093	3300018878	Goat Feces	MEKVKKVAKYVTNILAIISALVAGINAVEGISIPYAIQIVQIIAVVQGVIGTYLLGSKVTTKGE
Ga0223825_108451053	3300021255	Cattle And Sheep Rumen	MKKVSKYVVNILCIISALIAGFNAIDGITIPYASQLIQGIAVINGVIGTYLLGTKTVQEIQKGK
Ga0223845_1075112536	3300021387	Cattle And Sheep Rumen	MEKIKKIAKYTTNILAIISALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLSNKAINNKKTEI
Ga0223845_1269366636	3300021387	Cattle And Sheep Rumen	MEKIKKIAKYTTNILAIISALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKVIKDKEE
Ga0224422_111205472	3300021400	Cattle And Sheep Rumen	MKKVSKYVVNILCIISALIAGFNAIDGITIPYASQLIQGIAVINGVIGTYLLETKTVQEIQKGK
Ga0224423_102571912	3300021431	Cattle And Sheep Rumen	MEKIKQIAKYTTNVLAIIGALVSGINAVEGITIPYAIQIVQVIAVIQGVIGTFLLGNKAVEVNEEKEEMLKEGDEENGF
Ga0257038_1145843	3300023504	Human Gut	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISNREKK
Ga0257077_118168262	3300024272	Goat Feces	MEKVRKIAKYATNILAIISALVAGINAVEGITIPYAIQIVQVIAVVQGVIGTYLLGSKVTKG
Ga0255059_100205694	3300024486	Rumen	MKKVKKIAKYTTNILGMISMLIVGINAIDGVDIPNAMVLVQIIAVIQGVIGTYLIQGKLWGGK
Ga0256406_11184782	3300026522	Rumen	MEKIKQMAKYTTNILAIIGALVSGINAVEGITIPYAVQIVQIIAVVQGVIGTYLLSNKAVTTLNKEEK
Ga0256404_100417017	3300026549	Rumen	MKWLWENKKKIAKYTLNILSALAMLVAGINAIEGITIPYAHQIVETIAVINGVISTYLLGQKFTK
Ga0233383_10410312	3300028480	Elk Feces	MEKLKTIAKYVTNILGIIGALIAGLNGVEGITIPYAVQITQSIVVVQGVIGTYLLGQKAIKNKEE
Ga0233366_10485812	3300028481	Elk Feces	MNKEKIKKIAKYTTNILGIISMLIAGINAVDGITIPYAIQIVHVIAVIQGAIGTYLLSGKALESRKEEKENVKD
Ga0247611_100360985	3300028591	Rumen	MEVSDKVKKIAKYVTNILGMIAMAITGINAVDGITIPYAIQIVQVIAVIQGILGTYLIGTKAVQKIEEKKEG
Ga0247611_103212772	3300028591	Rumen	MNFEKIKKIAKYTTNGLSIIAALITGINAIEGITIPYAVQIVQIIAVLQGVIGTYLISNKALNYKKED
Ga0247611_105883343	3300028591	Rumen	MEKIKKIAKYATNILGMISMLVAGLDAIEGITIPYAIQAVKAIAVIQGVIGSYLLSQKFIKEEEK
Ga0265301_100191683	3300028797	Rumen	MEKLKKIAKYTTNLLAIIAALITGFNAIEGLTIPYASQIVQGIAVVQGVIGTYLLGSKVKQTTEIEEYEEV
Ga0265301_100481773	3300028797	Rumen	MEKIKKIAKYTTNVLGIIAALVAGLNSVDGITIPYAIQVVQIIAVVQRNYRHVLVVK
Ga0265301_100868183	3300028797	Rumen	MEKVKKIAKYTTNVLGIISALVYGINGVEGITIPYAIQIIGIIAVVQGVIGTYLLGQKMIKEEEK
Ga0265301_107847332	3300028797	Rumen	FMEKVKKIAKYTTNVLGIIAALVAGFNSVDGITIPYAIQVVQIIAVVQGVIRHIFTFR
Ga0265298_100014943	3300028832	Rumen	MITNEKVKKVVKYVMNILAMISALIVGLNAIDGITIPNATIIVESIAVINGVAGTYLLGQKALSKEEK
Ga0265298_100076468	3300028832	Rumen	MKWLWENKKKIAKYTLNILSAFAMLVAGINAIEGITIPYAHQIVETIAVINGVISTYLLGQKLTK
Ga0265298_100557665	3300028832	Rumen	MKWLWENKKKIAKYTLNILSALAMLITGINAIDGITIPYTHQIVEVIAVINGVISTYLLGQKITK
Ga0247610_100010075	3300028833	Rumen	MEKLKKIAKYTTNILGIIAALVAGINSVEGITIPYAIQIVQIIAVIQGIIGTYLLSGKAIEVKKEEE
Ga0265299_100617797	3300028887	Rumen	MEKIKKIAKYTTNVLGIIAMLVAGFDAIEGITIPYAIQIVKGIAVVQGAIGAYLLSGKAIEVKKEEEK
Ga0265299_100707533	3300028887	Rumen	MEKFKKIVKYTINVLCMIAALITGIDAIDGITIPYAYQIVQVISVVTGVAGTYLLGQKLFKED
Ga0265299_105804271	3300028887	Rumen	MEKIKKIAKYTTNILGIIAALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLSNKAAKEVKDEGNXYIST
Ga0247609_100076773	3300028888	Rumen	MAKINEVRCLNMEKIKQIAKYTTNILAIIAALVAGINSVEGIEIPYAIQIVQVIAVVQGVIGTYLLSNKVIKDKEE
Ga0247609_102302934	3300028888	Rumen	MKKVKKIAKYTLNILGAISMLIVGINAIDGITIPYATQIVEIIAVINGVISSYLLGQKVVKEG
Ga0265300_102413121	3300028914	Rumen	MEKIKKIAKYTTNVLGIISALVYGINGVEGITIPYAIQIIGIIAVVQGVIGTYL
Ga0169186_1073423	3300029099	Human Host-Associated	MEKLKKIAKYTTNILAIISALIAGINAVDGITIPYATQIVQIIAVVQGVIGTYLLGQKVVTNKEDK
Ga0169203_1083264	3300029104	Human Host-Associated	MERVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINNKEE
Ga0168822_1024878	3300029116	Host-Associated	MEKIKTIAKYLTNILAIVSALVAGINAVDGIAIPYAIQIVQIIAVVQGVIGTYLLGQKAISNKEE
Ga0168844_10022712	3300029118	Host-Associated	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQIIAVVQGVISTYLLGQKAISNREKK
Ga0168816_10067257	3300029119	Host-Associated	MEKLKTITKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAIKKED
Ga0168799_100014274	3300029122	Host-Associated	MEKLKKAAKYTTNILAIVSALIAGINGVEGITIPYAIQIVQIIAVVQGVIGTYLLGQKVIKEEK
Ga0169224_10406812	3300029124	Human Host-Associated	MEKLKKIAKYATNILAIISALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK
Ga0168747_100023138	3300029136	Host-Associated	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPCAIQIVQVIAVVQGVIGTYLLGQKAINNKEE
Ga0167473_100015170	3300029197	Host-Associated	MEKIKKIAKYATNILAIVSALVAGINAVEGITIPYAIQIVQIIAVVQGVIGTYLLGQKAITEKEEK
Ga0167476_1005219	3300029215	Host-Associated	MEKIKKIAKYTTNVLAIIGALVAGINGVDGITIPYATQIIQIIAVLQGIIGTYLLTNKTLKGSE
Ga0168707_1006023	3300029220	Host-Associated	MEKIKKIAKYTTNVLAILGALVAGINGVDGITIPYATQIIQIIAVLQGVIGTYLLSNKVINK
Ga0168766_10015425	3300029238	Host-Associated	MEKIKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVLGTYLLGQKAINKKEE
Ga0168762_10039228	3300029245	Host-Associated	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINNKEE
Ga0168762_1064945	3300029245	Host-Associated	MGKIKKIAKYATNILAIVSALVAGINAVEGITIPYAIQIVQIIAVVQGVIGTYLLGQKAIAEKEEK
Ga0168762_1105741	3300029245	Host-Associated	MEKLKKIAKYTTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK
Ga0168696_10049231	3300029248	Host-Associated	MEKIKKIAKYTTNVLAIIGALVAGLNGVEGITIPYATQIIQVIAVLQGVIGTYLLSNKVINK
Ga0168827_10008869	3300029256	Host-Associated	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAISNKEE
Ga0307249_101258767	3300029305	Goat Feces	MEKLKKIAKYTTNVLAIVSALVAGINSVEGITIPYAIQIVQIIAVIQGIIGTYLLGQKAVSKEEK
Ga0307249_125635102	3300029305	Goat Feces	MEKVKTIAKYVTNILAIISALVAGINAVEGITIPFAIQIVQVIAVVQGVIGTYLLGQKVAKKED
Ga0243238_1033012	3300029326	Human Fecal	MERVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKAISNKEE
Ga0243238_1050765	3300029326	Human Fecal	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGKKAISNKEE
Ga0243378_10362442	3300029415	Human Fecal	MEKLKKIAKYTTNILAIISALIAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK
Ga0243728_100345210	3300029444	Human Feces	MEKIKAIAKYAINILAIISALVAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRNKPKV
Ga0244915_1030813	3300029559	Human Fecal	MEKIKKIAKYATNILAIVSALVAGINAVEGITIPYAIQIVQIIAVVQGVIGTYLLGQKAIAEKEEK
Ga0244861_1055237	3300029565	Human Fecal	MEKIKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAISNKEE
Ga0244861_1085686	3300029565	Human Fecal	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISSREKK
Ga0244893_10045976	3300029579	Human Fecal	MEKLKKIAKYATNILAIVSALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK
Ga0244893_1071744	3300029579	Human Fecal	MEKVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKAISNKEG
Ga0245119_1070387	3300029587	Human Fecal	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQIIAVVQGVISTYLLGQKAXXXXXXNKYEYN
Ga0245106_1372672	3300029589	Human Fecal	MEKIKAIAKYAINILAIISALVAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRNKPKI
Ga0245099_100159137	3300029590	Human Fecal	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINKKEE
Ga0245132_1550422	3300029610	Human Fecal	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISN
Ga0245124_10348562	3300029622	Human Fecal	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISNKEKK
Ga0224414_120765641	3300029705	Goat Feces	KKVAKYVTNILAIISALVAGINAVEGISIPYAIQIVQIIAVVQGVIGTYLLGSKVTTKGE
Ga0245193_1158291	3300029711	Human Fecal	IAKYAINILAIISALVAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRDKPKV
Ga0245237_10351871	3300029718	Human Fecal	SLNKKNLEYNILGGFNMEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISNREKK
Ga0245168_1307742	3300029734	Human Fecal	MEKLKKIAKYATNILAIISALVAGINAVDGITIPYAIQIVQVIAVIQGVLGTYLLGQKVVNDNKEDK
Ga0245251_10155520	3300029745	Human Fecal	MEKLKKIAKYTTNILAIISALVAGINAVDGITIPYAIQIVQIIAVIQGVIGTYLLGQKVVTNKEDK
Ga0244882_100143534	3300029815	Human Fecal	MEKIKKIAKYTTNVLAIIGALVTGINGVDNITIPYATQIIQIIAVLQGVIGTYLLSNKVINK
Ga0244882_10563302	3300029815	Human Fecal	LNKKILEYNILGGFNMEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQIIAVVQGVISTYLLGQKAISNREKK
Ga0245026_1102834	3300029820	Human Fecal	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKAINNKEE
Ga0245287_10062629	3300029850	Human Fecal	MEKVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINNKEE
Ga0245287_1252922	3300029850	Human Fecal	KLKTIAKYLTNILAIVSALVAGINAVDGITIPCAIQIVQVIAVVQGVIGTYLLGQKAINNKEE
Ga0245291_1039228	3300029852	Human Fecal	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINSKEE
Ga0245305_100043568	3300029860	Human Fecal	MEKLKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVAQGVIGTYLLGQKAISNKEE
Ga0326513_1000055223	3300031760	Rumen	MKKVKKIAKYTTNILGMVSMLIVGINAIDGVDIPNALVIVQIIAVIQGVIGTYLIQGKLWGGK
Ga0326513_100024393	3300031760	Rumen	MEKVKKIAKYTMNILGIIGALITGINAIDGITIPYAYQIVQIIAVFEGVLGTYLTGNKVYNAVQTK
Ga0326513_100107075	3300031760	Rumen	MKKVKKIAKYVLNGLGIVSMLVAGINAVDGITIPYATQIVQIIAVINGVISTYLLGQKVA
Ga0326511_100270636	3300031867	Rumen	MNKDKVKQIAKYATNIIAILMALITGINGVEGITIPYAMQIVGILSVVQGVIGTYLLSNKVINK
Ga0326512_1000103747	3300032038	Rumen	MNFEKVKKIAKYTTNGLGIIAALITGINAIEGITIPYALQIVQVIAVIQGVIGTYLLSNKALSNK
Ga0326512_1000320227	3300032038	Rumen	MEIKGDDIMKEKIKKYAKYTTNILGMVSMLIVGINAIDGVDIPHALIIVQVIAVIQGVIGAYLIQGKLWSDNK
Ga0310690_102164473	3300033463	Rumen	MKWLLKNKKTIAKYVLNILSATAMLITGINAIEGITIPYAHQIVEVIAVVNGVISTYLLGQKIAK
Ga0310690_102769333	3300033463	Rumen	MDKVKKIAKYTTNVLGIISALVYGINGVEGITIPYAVQIIGIIAVVQGVIGTYLLGQKIVKEEEK
Ga0310690_114549451	3300033463	Rumen	MEKLKKIAKYTTNLLAIIAALITGFNAIEGLTIPYASQIVQGIAVVQGVIGTYLLGSK
Ga0310690_117068561	3300033463	Rumen	VEKVKKIAKYTTNVLGIIAALVAGLNSVDGITIPYAIQIVQVIAVVQGIIGTYLLSNKAVSIVKEEEK
Ga0310690_122297272	3300033463	Rumen	MEKIRTIAKYTVNVLCIISALVAGINAVDGITIPYATQIVQVIAVINGVIGTYLLGSKTVNTIKEGK
C2962992__gene_136378	7000000191	Human	MEKIKTIAKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAI
C3119408__gene_192480	7000000200	Human	MEKIKTIAKYAINILAIISALVAGINAVDGITIPYAVQIIQVIAVIQGVISTYLLGQKVVRNRGENRENNRDKPKV
C2611742__gene_169301	7000000417	Human	IAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAISNKEE
C2455869__gene_260437	7000000633	Human	AKYTINVLAIISALVTGINAVEGITIPYAIQIVQVIAVVQGVISTYLLGQKAISNREKK
C5539278__gene_183691	7000000659	Human	MEKIKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQVIAVVQGVIGTYLLGQKAINSKEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences