Sample 3300014256

Overview

Basic Information
IMG/M Taxon OID	3300014256 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0116084 \| Ga0075318
Sample Name	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	254405694
Sequencing Scaffolds	62
Novel Protein Genes	70
Associated Families	65

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	8
All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Tectiliviricetes → Kalamavirales → Tectiviridae → Deltatectivirus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4
Not Available	14
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: Antioch, San Francisco Bay, California
Coordinates	Lat. (^o)	38.052509	Long. (^o)	-121.76873	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001338	Metagenome / Metatranscriptome	719	Y
F001667	Metagenome / Metatranscriptome	654	Y
F003523	Metagenome / Metatranscriptome	481	Y
F003758	Metagenome / Metatranscriptome	470	Y
F004067	Metagenome / Metatranscriptome	455	Y
F005789	Metagenome / Metatranscriptome	390	Y
F007536	Metagenome / Metatranscriptome	349	Y
F010394	Metagenome / Metatranscriptome	304	Y
F016304	Metagenome / Metatranscriptome	248	Y
F017668	Metagenome	239	Y
F019675	Metagenome	228	Y
F019983	Metagenome / Metatranscriptome	226	Y
F020727	Metagenome / Metatranscriptome	222	Y
F020989	Metagenome	221	Y
F021886	Metagenome / Metatranscriptome	217	Y
F024195	Metagenome / Metatranscriptome	207	Y
F025706	Metagenome / Metatranscriptome	200	Y
F027086	Metagenome	195	Y
F029478	Metagenome / Metatranscriptome	188	Y
F031306	Metagenome	183	Y
F031543	Metagenome / Metatranscriptome	182	Y
F031716	Metagenome	182	Y
F032367	Metagenome / Metatranscriptome	180	Y
F032702	Metagenome	179	Y
F033142	Metagenome / Metatranscriptome	178	Y
F033343	Metagenome	177	Y
F033921	Metagenome / Metatranscriptome	176	Y
F034408	Metagenome / Metatranscriptome	175	Y
F035352	Metagenome / Metatranscriptome	172	Y
F035426	Metagenome / Metatranscriptome	172	N
F036673	Metagenome	169	Y
F037393	Metagenome / Metatranscriptome	168	Y
F038128	Metagenome	166	Y
F040284	Metagenome	162	Y
F041155	Metagenome	160	Y
F042513	Metagenome / Metatranscriptome	158	Y
F042887	Metagenome / Metatranscriptome	157	Y
F044471	Metagenome / Metatranscriptome	154	Y
F046091	Metagenome	152	Y
F047517	Metagenome	149	Y
F051173	Metagenome / Metatranscriptome	144	Y
F053838	Metagenome / Metatranscriptome	140	Y
F054134	Metagenome	140	Y
F055037	Metagenome / Metatranscriptome	139	Y
F055103	Metagenome / Metatranscriptome	139	Y
F058989	Metagenome / Metatranscriptome	134	Y
F059819	Metagenome	133	Y
F061612	Metagenome / Metatranscriptome	131	Y
F062882	Metagenome	130	Y
F067500	Metagenome	125	Y
F069501	Metagenome / Metatranscriptome	124	Y
F071911	Metagenome	121	Y
F072550	Metagenome / Metatranscriptome	121	Y
F073724	Metagenome	120	Y
F083194	Metagenome / Metatranscriptome	113	Y
F084190	Metagenome / Metatranscriptome	112	Y
F084486	Metagenome / Metatranscriptome	112	Y
F088154	Metagenome	109	Y
F089875	Metagenome	108	Y
F091541	Metagenome / Metatranscriptome	107	Y
F097761	Metagenome / Metatranscriptome	104	Y
F097964	Metagenome / Metatranscriptome	104	Y
F098592	Metagenome	103	Y
F102119	Metagenome	102	Y
F102135	Metagenome / Metatranscriptome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0075318_1000001	All Organisms → cellular organisms → Bacteria	70211	Open in IMG/M
Ga0075318_1000031	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Tectiliviricetes → Kalamavirales → Tectiviridae → Deltatectivirus	13033	Open in IMG/M
Ga0075318_1000686	All Organisms → cellular organisms → Bacteria	3813	Open in IMG/M
Ga0075318_1000773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3595	Open in IMG/M
Ga0075318_1003455	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
Ga0075318_1004203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1724	Open in IMG/M
Ga0075318_1004407	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1698	Open in IMG/M
Ga0075318_1004551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1680	Open in IMG/M
Ga0075318_1004871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1639	Open in IMG/M
Ga0075318_1008050	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
Ga0075318_1011369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1193	Open in IMG/M
Ga0075318_1014237	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
Ga0075318_1014470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1096	Open in IMG/M
Ga0075318_1021143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
Ga0075318_1023723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	927	Open in IMG/M
Ga0075318_1024766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	913	Open in IMG/M
Ga0075318_1024860	Not Available	912	Open in IMG/M
Ga0075318_1026330	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
Ga0075318_1029433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	859	Open in IMG/M
Ga0075318_1029549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	858	Open in IMG/M
Ga0075318_1031436	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	840	Open in IMG/M
Ga0075318_1032498	Not Available	830	Open in IMG/M
Ga0075318_1033656	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	820	Open in IMG/M
Ga0075318_1047880	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	727	Open in IMG/M
Ga0075318_1054226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	697	Open in IMG/M
Ga0075318_1054253	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	697	Open in IMG/M
Ga0075318_1055835	Not Available	690	Open in IMG/M
Ga0075318_1056222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	689	Open in IMG/M
Ga0075318_1060229	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	673	Open in IMG/M
Ga0075318_1062153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
Ga0075318_1063977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	659	Open in IMG/M
Ga0075318_1067235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
Ga0075318_1072305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
Ga0075318_1074528	Not Available	627	Open in IMG/M
Ga0075318_1077216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	619	Open in IMG/M
Ga0075318_1077564	Not Available	618	Open in IMG/M
Ga0075318_1080212	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	611	Open in IMG/M
Ga0075318_1087678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
Ga0075318_1088583	Not Available	592	Open in IMG/M
Ga0075318_1088905	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	591	Open in IMG/M
Ga0075318_1089345	Not Available	590	Open in IMG/M
Ga0075318_1091872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	585	Open in IMG/M
Ga0075318_1092803	Not Available	583	Open in IMG/M
Ga0075318_1095099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
Ga0075318_1105266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
Ga0075318_1105839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	559	Open in IMG/M
Ga0075318_1106903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
Ga0075318_1110753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	551	Open in IMG/M
Ga0075318_1119478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
Ga0075318_1121954	Not Available	534	Open in IMG/M
Ga0075318_1125564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
Ga0075318_1126033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	528	Open in IMG/M
Ga0075318_1126111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
Ga0075318_1126910	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
Ga0075318_1129781	Not Available	523	Open in IMG/M
Ga0075318_1133654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
Ga0075318_1134403	Not Available	517	Open in IMG/M
Ga0075318_1135568	Not Available	516	Open in IMG/M
Ga0075318_1136713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
Ga0075318_1137871	Not Available	513	Open in IMG/M
Ga0075318_1147316	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
Ga0075318_1148679	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0075318_1000001	Ga0075318_100000176	F091541	MARTSIVSKPQHRYGDSQAKVRRVPFGLGEAPGTVGAAEKCLRCSFGNIPVVEEVVWTIPLPLTASEALATFGETVNLLSGSSSVPGVASIDSTFLINGILQTDILAQGIGVHVFCEPMSFSTIGNAFNAPNAPLGSSPPSPDVFTLFDIAAGALGPDINTDANDPNFFPAVFEFGGPVWRAGWNFINAYQFQWKTSQRELVLNELAADVSYFGSFADAMASGTSEVPIIEFVALVNAVYRSKGSGTIFLPVSFRRVGSVTTDNPVAGGTNVGIFHPTRDFDLAPVTWGGLRWQGYGCRGQMYRPVESPCFLERGIPIGMLFNSQDAVHQAQMMEALTIDNEPFGTNVSPDENVGGATSGGGGTATMLEQTLDAVPVYAPQIVNVDRQIFKGGILKIAIKIKGWEMPGGWKAYCAQNMPQVLSPAPASA*
Ga0075318_1000001	Ga0075318_100000177	F034408	MQPKNQNVKNLAIYSPRIAYGMIVGVPRVPVVVDVPIQFSSSTVNAPPVEASFDNNLTQDTMIERVSFNLFQQNSFPGSPFQSLYFNQLKQSGQTGVGINMQVFGGPKYAINDGFTDLGNLVDVFATTWPEGWPLARQSNVRVRAILTQTPTSVPFNILITFLGWQFLDKSIDDLSDEDCRARLRKLGIETPEVASLLKA*
Ga0075318_1000001	Ga0075318_100000183	F061612	MKLIHEETMCCGYKRCPKIRIFEDGSVEISDDDPQEGSVGTIKLKPRTADRLVELLSERME*
Ga0075318_1000031	Ga0075318_100003111	F024195	MNGDKLFNVLGAIVTVALVTTIVSRPTSAQVIKSMGDAFAGSIRAALGK*
Ga0075318_1000686	Ga0075318_10006865	F016304	MRPVLVAFLLAADVFVVAALAITQRHGWLPPFIAFGVVLVGLVWFEAWAIRHRHDDD*
Ga0075318_1000773	Ga0075318_10007734	F036673	LEVSDPQRAQTLKRKVLDRITDVRRHLNALQAAMAAFGEDFDLDVFQREFESEDPDELNRVKAVERGVDQLYNYMVELAAFGLELAGERRRFDETNARRDLDALARLGVISRERAARLQRLREYRRLFVHEYASATAAQVHEAARILADELPPFYRAYGEWVRTGFRVRR*
Ga0075318_1003455	Ga0075318_10034552	F097761	MTPLATEAWPAVFGGLIPVIGFGAAGYLIYRAVKAPPDETDHDDEP*
Ga0075318_1004203	Ga0075318_10042032	F042887	MSEGVDSTPNPWRIQVREHPARRESISWREAIRDAVKGSYPQASFTSPPEGTRFTVEVIFRMTPEDLARPAFDLDNFAKPVLDTLFTSQNVSRLSGVLLPEVNDTWVFRLLLEKVRVETPQEQGADITISWHPSVTPKLSTASASPPA*
Ga0075318_1004407	Ga0075318_10044071	F032702	VSTQKVDEILEKSYVLVVKVVSFQKNKPIKNANVKVFRLEKEPITLAQWTENLKNGTPFKRSILSMNTANNGTVTAELAEGFYEVEVENFGFNKVCELTQNDEALFIQPKKHWWQ*
Ga0075318_1004551	Ga0075318_10045514	F044471	MPRNDQPPSPKTISGFLYVAVLLIAVALVYVAVRALFA*
Ga0075318_1004871	Ga0075318_10048711	F055103	EMIATQHTLASGLRGFWLVLDGHLGPPRLANRMIYWLRRSSPTWLAQNDPEIRVLMKYPG
Ga0075318_1008050	Ga0075318_10080502	F055037	MAVSSDVIPVTISSLPTQAGPVPDRMTIWPMDDGSYGLDASFQGASGYERAERHTKLLEEHGVRHSLRQELGGAWTLRFGPLSAAEVSVALQAFVQ*
Ga0075318_1011369	Ga0075318_10113691	F084190	MKTKHTTIAVVLAAVAVLCAAFATSAVAAPSWKFEGKALEGTESETILGGAYESSMTIPGLTTKCEDFLYKLTIENHEGAGSGEVTEVPLYNCTSDNEEGEEVCAVGSIGAEELPWPAHLATVSSSPYIVIEGVDVGIVYTGEECPLGEILVPVTGSAGGIISNAEETATFNAATLSATGTSLEALSTKIEWNGVFPTEAFEWHREEAISAS*
Ga0075318_1014237	Ga0075318_10142372	F019675	MDMLRTRYIIVVIMGVLGVLLVVKGAWGGVWPLSIQLIAGVLLLVLAGLRWWTMR*
Ga0075318_1014470	Ga0075318_10144702	F042513	LMSKVPLLRRWLQKASTAAIERSNPELASAMKKLERVGAHKDPRRAQQAMSQLSAQERRALLEVQEQQGGLPPEATNREMRRRLEKAQKAGRKR*
Ga0075318_1021143	Ga0075318_10211431	F019675	MMKTRQIIAVITGVLGILLIVRGAMGGVWPPSIQLIAGILLCVFAGLRWWILR*
Ga0075318_1023723	Ga0075318_10237231	F059819	MPRLLVIDDRDQTVEMCHRHLPEFDTVTRCDRNLPCQVCEERERGCQLKCAHDFREAALALARL
Ga0075318_1024766	Ga0075318_10247662	F005789	MESRALMATVVALDSSPANVLRSMRGSIVGARLGYPDVLQVEIRDAAGETWMLATQDAEWTPTDPGELVGQSVEDAQIDEATGELLCKLSDGSVLDVKPARKEADDDPPNWELITPGGVLLEFGPGVRWQISSADDPALSRR*
Ga0075318_1024860	Ga0075318_10248602	F010394	MSETRKPVRPAHGDARRWQTEFDELELRMDALRQAFTEAIRSFEMTEETVERIHARFDDLGEQVHAMHCTYPFGGWPGQEDCRFEPPVPYESEARRTQG*
Ga0075318_1026330	Ga0075318_10263301	F007536	LSQKVEAEPVGNHRERSQGRAAMHGHEVASFPGEVGPPLGQSCERTSPFRVKFALSASLATGRDAAHAVSGAPTALVLPAVTSRTQYVRFTDEVPRRLILGWVSPGYKSNTKGRGDASVAGTVFPRPRLRGSQQRQSRGLRPGRLAGPGAGSERQNLRVPPGPLRFTGPVSPAVEATTWPGGTSSPQAVGPLSNSPQQPQPGQPVVRSP*
Ga0075318_1029433	Ga0075318_10294333	F019983	MKFKAVLFSIVILSALFLSAFGSPAAPQTVKLQDTVVPPDVTVVPPTVVVEGTPAVPVTGDDASIGLWTIVLFGLLALLGIAFLVALFSPRTTHEHIDRNPPPPDV*
Ga0075318_1029549	Ga0075318_10295492	F071911	VTQRARQAYVDAVVTNYVRLPGTPLRASRGDRHFARLLHDNRVPLRVVYAAFVLAIARREIRSANLPPLPTIRTLRFFQGAIDEVLQARLDPSYVHYLATKIKPLVAAKDAVLRSRRDAPSDSRVS*
Ga0075318_1031436	Ga0075318_10314361	F102135	MCWTGVIIGMFVGAGIGIMIAGIMSAAHRREAEDHSSETPIYHAVMDEVEEVSDELPPLPKPETYFDRYPHS*
Ga0075318_1032498	Ga0075318_10324981	F046091	MEVKLTPSFVLTDEHAKSRLNMPVLVNMRTNEAYNPSDPLEAYPGWGKLQARDVVKRLVNGKTFSD
Ga0075318_1033656	Ga0075318_10336561	F067500	AYRKTMKIVNMSSFPPRCYYCDSKNFGSVDGYERHVVTRHPNLPGYPGPADIKYYRLEKQDMYWEREIKADFEWK*
Ga0075318_1041567	Ga0075318_10415671	F029478	MGCLSNRIIGVAAALLLAQVLSGCVSLRIEKKQEGVDVLPPPVEFIQKKTLLEEVLAGYGAPTDLVDMNGDFALLYRRALYRGMRVSMGIPLKSVLLPNPSMEAKGNLLRYDTAVFIFTADGVLKDMKYEKGTSRSLWEDYWK*
Ga0075318_1044559	Ga0075318_10445591	F072550	MAPTERSDAVTTPWPRPSFTAGLSHAQPAAIALIALSSTKLSEPLPVSRRRHGMPDEGEGPTAIAMVVRDRADDPTWFLQQVLEPFAELIASDLGPQAVTSALAAEHAYVIEAELADPDDLGHIQAAWALAKCVCEE
Ga0075318_1047560	Ga0075318_10475601	F097761	AEEAWEPVLFGGMIPILGALAVGYIIWRAVRDNDESDEE*
Ga0075318_1047880	Ga0075318_10478802	F017668	MNKGRLYDELIPIEQLSYKGYNTPELANAKIKQILDEVKNEMPPFTEKWVNTEYENPDWKATCEAMNERTIAREKWFIKWFGE*
Ga0075318_1051506	Ga0075318_10515062	F035426	MLHQPTYAPVPMLAADVNCFWALEQDQESYNREVYLPDAYIEVIINVGAPLVLESEHGMLELPRAFVNPLQYKPLRIRAAGFCQMISMQLYPWAVKPILNIDADPSTVHVIGLDADWQRFADDLKQIVAHRGYGEAIDCYQEYVCKTAYRHKHDVTLIRTAGHLL
Ga0075318_1054226	Ga0075318_10542262	F102119	MEILRNLFGALTSGIIRLLVAVGILAAAYFFLIKPVLHTANHAIDSANKSLESSLGTEVDLGDIGGTLEKVDKRVERQIRAAFHTAKHNGNPEKLVRCIQRAEGNVHRIHRCTVKY*
Ga0075318_1054253	Ga0075318_10542531	F035352	SEEFQKQKTDKPTREKPENPTATVLRKHLKKRNLHLSTTPNATIQGSKIKNDLLLLKPSVDPNQENYPPNQVKMIIEVKNHGASVKTLKNGKQQDPNRALRLKFNELEATTGVRNFAVVVFSETLIPPKGPYKWRFKEDVIGKENCKVFTLVARQLYPAGGLYVKSNIESMLKKDQMKKTQELQKLIKYLTCL*
Ga0075318_1055835	Ga0075318_10558352	F073724	ILKRKILTDCSIDVTILDTSEDGLVLRFEDIVNRNSLTLITDFVKKHQLNILFDNGVYFISNQLLIPSEPTYLSE*
Ga0075318_1056222	Ga0075318_10562222	F088154	WVYGTIWFIVWVVCLWLVWRMVDRKDLNRAGWIILTIFFPIIGLIVVAILPARRRPAPPETLP*
Ga0075318_1060229	Ga0075318_10602292	F001338	MEPNNDRKPLKSIETAGTYKLKLIKPAFDKIRAWEDGTVSCRLFFLDDQGNCLSKSFSSKWGKPLAMLVGKFSGKFTEELRLDATPAEFMEYITPACGKTCLLGVEAEPSGEYNGKPQYKYKLTYPKGSQKPTVSEPPPENPPF*
Ga0075318_1062153	Ga0075318_10621531	F003758	KAIRNIKYDPRMSANVLRAFENAEDEVLINTLPGAPRLDVPSLFRPQFMTEVQKEHPEYFADLPKLS*
Ga0075318_1063977	Ga0075318_10639771	F027086	MNSHTPIPASRGITGEALATAVGILGSALLLAKKLFGSKSAKAEPMGRADFYAELAALKDQIHANHLALLEKLDANHRELLAALDR
Ga0075318_1067235	Ga0075318_10672352	F083194	VPENDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRKSQQAQ*
Ga0075318_1072305	Ga0075318_10723052	F004067	VDDERAPICPRCGVTMVPTALSAVGAAGGDWVCLECEETGEPDAA*
Ga0075318_1074528	Ga0075318_10745282	F031716	MSRFTPGPWLVNEENGSYGVFSNDALLAVTLSDDLKDKNAAKANAHLMASAPLLLEVIKQIKEHLDNNMIVTEEGLKINDSHLRDSISDAILRAEGYRL*
Ga0075318_1077216	Ga0075318_10772161	F025706	MTEKTKLPGGPDKTVTWIWLEEGQLKVEYYDFSEAAQRLFGNDIAYTITVHAMDKLFSTVNQDEATLIPWMEQYFKSYFGIKQWLQENGIDFSVEVDGWA*
Ga0075318_1077564	Ga0075318_10775641	F031543	RVAGVSSGALPTLYKARGLHTKLPVCAICVERTRGRTQKVTLGYGVAVWLCAGHAGQDFQTRRSGRDFVRTLSGIWKANGCLTSARSRALHAHLASLQARPRRPRPGSYAWPELRRQAEAAYADGVRPKDLADTIHTTYATCPAHPPSRRTLERWAAQRRWLTRRPP*
Ga0075318_1079273	Ga0075318_10792731	F097964	HHPLGARLVAPQRGILGLFVQLGQAPFRGIDVKDASSAARATA*
Ga0075318_1080212	Ga0075318_10802121	F033343	VLEGESFMDLVAASLKEEGGQHVHGWENITIAEVKATAVLKNKLVSV*
Ga0075318_1087678	Ga0075318_10876782	F003523	MPFWTWIPLIILFVLLLLLGSIVVLGRVGNGRYLRPVVTFLSKVPLFKRWFQRASIAALERQNPELAGAMKKIQAFGEPKTPEQAQRMLNLLTPSERRAYMAAVGYENQMPEATNRQLRRRMEHGGAGMPVNT
Ga0075318_1088583	Ga0075318_10885832	F031306	MKNFKCPICGGSTEKVWENATKTRYGMRCREGHNKTDDKAGVSKQYPTILVSSEELE*
Ga0075318_1088905	Ga0075318_10889051	F001667	MQINKSFFSAISMNTKYMFIVAAMAVMLIGATALATSESAFAGGKKKTEYNQATSQANACGNGKLPLNVFCQNIGSQVQGDENAVAASGSQSAE*
Ga0075318_1089345	Ga0075318_10893451	F020727	SMNKYQALIKTISGKGGDFWEAFNKIPTEPMKGISIESSWSLYGYWDFVIFFKADSNENSLHFVGEVLRSMPGIADTSTSPMTVLKDHKK*
Ga0075318_1091872	Ga0075318_10918721	F005789	MATAVTLDTSPINVLRSMRGSIVDARIAYPEVLHVEIKDSAGDLWQLATQDAEWSPSDPAELVGRSVTDADIDAETGELRCKLSDGSVLDVRPAEREAEDDPPNWELITPGGVVLEFGPGVRWQIGSADSRSSFRA*
Ga0075318_1091872	Ga0075318_10918722	F032367	KQFRQASKEAGLTARERREASEALHAEKQAGHVQSDMSYGELLDWLRQWRG*
Ga0075318_1092803	Ga0075318_10928031	F020989	VRTSEPIDRRAVAVVVTTDGRRVQVPMAGLEVPPLSLLRSILVGVESLIGLIVTGSRRENGGTRRSVRE*
Ga0075318_1095099	Ga0075318_10950992	F040284	VALFFHSDDVDQLIPFKEAVQITEFALRDLVSPKGVNAPRKRLNLHRNVGEASFDIVLNIYAGGSANYGAIGAQVALHRKAIAGNTQ
Ga0075318_1105266	Ga0075318_11052662	F069501	MSLPVCLPPNRTPSSCSPAAWLDELVDEIVVQGEDRLLEQDIAHWREDLRKRLEQVQQHPEQGLGFIEEHIRQATLRLQCLLVQKAMQDKANLVEEKCPDCGEPLRDKKRRVVRWLDAYCGKV
Ga0075318_1105839	Ga0075318_11058391	F097761	VICQATEAWPAVFGGLIPIIGLAAIGYLIYRAVRDGDEDDG*
Ga0075318_1106903	Ga0075318_11069032	F062882	RKKSAKRWFRKKLQMPGAQKLRSEAHLRVRRSDEVEAQRRRWTFYETIK*
Ga0075318_1110753	Ga0075318_11107531	F098592	MDFGNIRRWVAGIALVMAAVGLGLLPVAAAEKESKALLSWVTAIDLDECEPYQIRDKIMALHPQYGTIVVAEREIRALDVVADGKLIKTEFLTMDGKPESPSALSVGQYVWVKGVLHPDGFVAAFVVQQIAKPQEEKFIYK
Ga0075318_1119478	Ga0075318_11194781	F033142	QALEQVPVELRDDPLFNVPTSYTDNYHYILNVSPQVVQERTKIYTQFKAA*
Ga0075318_1121954	Ga0075318_11219541	F089875	TMFPFWLIFGIVTILVGIFNKQLLRILGLKPMSEVFTTPNLKHSSKISEKIGQWLVIILGANFLIQGLGKALPNDISYKISFLLLGLSGLMLLAILGITVTNWKAK*
Ga0075318_1125564	Ga0075318_11255642	F021886	MTWETIRSLVHDEWAILLLLLVWSVAGLAVICERLYALWGILPKSEVFKNRVLDAISSGDLSKASALCETATDPLGEVFGRGL
Ga0075318_1126033	Ga0075318_11260331	F032702	LRLLELGSFLEKTHKLVVRVVHFKGNKPFPDVNVKVYRVEKGPLSPTQWVENLKNGTPFKTMIISMSTDNIGNVTAELPEGVYEVKVENFGLNQVCELTQNLEVLFIEPKKRWW*
Ga0075318_1126111	Ga0075318_11261112	F037393	DMRRLKPVGRLAGHLYTHVHDIFEMKRPAVDYKG*
Ga0075318_1126910	Ga0075318_11269101	F033921	QRDIEALHQALLDLGMPDDLILEIEGRLRSQKKLLGKIFALMFPTLFGCRSAHELTRVRGWDKNWPSRILGALPKRSWLKRLRKLGQDIVSAIWRRAQSMSPATRSRWQLTPVIDDSVFRKYGGPLELVGNWYSGQYKRVVNGIDGVLLLMVVGDGRLVVPIDFAVRRPNPKGPG
Ga0075318_1129781	Ga0075318_11297812	F053838	LMRWDFWSLGVPLVAEYSGASAKTTGRAFFLLGVERDAPTSPAGDVGLLVHLSH*
Ga0075318_1133654	Ga0075318_11336542	F051173	CNSGSDPLVLARIGAGSDKADQRLNPDGSAIPGRTHEQGAARPVLIEGAFFQ*
Ga0075318_1134403	Ga0075318_11344031	F084486	FLESMAKHRKALELAIEEGFGGTLDPAEWRKTFESAEPQDAHRTMVVTGDHSAVLNAYVEILKASAGSRLVGLLPYRRPHAAQAFEALVEDGCLTADQAAELNVAYAIEGRLEHASPDVDASEVLEAIERLRRALPGLIEAVLAWLELHGVRFDGQR*
Ga0075318_1135568	Ga0075318_11355682	F038128	MAPLGALSQAWVSAEAALPQGWRVAGLWRVADRWVALSEGPGWEDYLSGSGEFADQALRRLSDRLRERRGPVTG*
Ga0075318_1136713	Ga0075318_11367132	F058989	MAMLRFLIKRFVAQRLLGLAVVVTLAFSVGVLVAGPIYADAARSAILSSAIKGAAVTVANARIRA
Ga0075318_1137871	Ga0075318_11378712	F047517	MLKALRHHPLVVGTGEVLVDAARYVTIVLLVLLLMGQLAKVAL*
Ga0075318_1147316	Ga0075318_11473161	F054134	WRIFALEAQNFAPDNPMYPRVFGHLDYDAMVRDSRGIFGGTETCARILKRIGEVVGTTHIGLTFHFGGLSRDKVLKSMERCARSVLSVLR*
Ga0075318_1148679	Ga0075318_11486791	F041155	GCAIDDGAESVEVGVHRGLRADGVLGTVGFGLSALLSLDRLNLVESII*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300014256: Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences